RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 PKIAP61925 76 aa13.75□□□□□ -0.21
PPP1CA-204ENST00000526510 MRPL23Q16540 153 aaKnown RBP13.75□□□□□ -0.21
PPP1CA-204ENST00000526510 STAB2Q8WWQ8 2551 aa13.75□□□□□ -0.21
PPP1CA-204ENST00000526510 DEFB131BA0A096LNP1 70 aa13.75□□□□□ -0.21
PPP1CA-204ENST00000526510 STPG4Q8N801 248 aa13.75□□□□□ -0.21
PPP1CA-204ENST00000526510 VCX2Q9H322 139 aa13.75□□□□□ -0.21
PPP1CA-204ENST00000526510 H3BNG1 76 aa13.74□□□□□ -0.21
PPP1CA-204ENST00000526510 MRPS36P82909 103 aaKnown RBP13.74□□□□□ -0.21
PPP1CA-204ENST00000526510 GAGE6Q13070 117 aa13.74□□□□□ -0.21
PPP1CA-204ENST00000526510 CSDC2Q9Y534 153 aaKnown RBP13.74□□□□□ -0.21
PPP1CA-204ENST00000526510 H7C423 109 aa13.73□□□□□ -0.21
PPP1CA-204ENST00000526510 UBE2L6O14933 153 aa13.73□□□□□ -0.21
PPP1CA-204ENST00000526510 PLNP26678 52 aa13.73□□□□□ -0.21
PPP1CA-204ENST00000526510 ANKRD39Q53RE8 183 aa13.72□□□□□ -0.21
PPP1CA-204ENST00000526510 PAPPA-AS1Q5QFB9 102 aa13.72□□□□□ -0.21
PPP1CA-204ENST00000526510 CHCHD5Q9BSY4 110 aa13.72□□□□□ -0.21
PPP1CA-204ENST00000526510 DGAT2L7PQ6IED9 249 aa13.72□□□□□ -0.21
PPP1CA-204ENST00000526510 PRKDCP78527 4128 aaKnown RBP13.71□□□□□ -0.21
PPP1CA-204ENST00000526510 C11orf86A6NJI1 115 aa13.71□□□□□ -0.21
PPP1CA-204ENST00000526510 DEFA6Q01524 100 aa13.71□□□□□ -0.21
PPP1CA-204ENST00000526510 HSBP1L1C9JCN9 74 aa13.7□□□□□ -0.22
PPP1CA-204ENST00000526510 TSTD3H0UI37 97 aa13.7□□□□□ -0.22
PPP1CA-204ENST00000526510 AMMECR1LQ6DCA0 310 aa13.7□□□□□ -0.22
PPP1CA-204ENST00000526510 SH2D6Q7Z4S9 175 aa13.7□□□□□ -0.22
PPP1CA-204ENST00000526510 CDC42SE2Q9NRR3 84 aa13.7□□□□□ -0.22
PPP1CA-204ENST00000526510 TCTAP57738 103 aa13.69□□□□□ -0.22
PPP1CA-204ENST00000526510 IGLV4-60A0A075B6I1 120 aa13.69□□□□□ -0.22
PPP1CA-204ENST00000526510 TRAV10A0A0B4J240 114 aa13.69□□□□□ -0.22
PPP1CA-204ENST00000526510 A0A0J9YXV3 536 aa13.69□□□□□ -0.22
PPP1CA-204ENST00000526510 IGLC3P0DOY3 106 aa13.69□□□□□ -0.22
PPP1CA-204ENST00000526510 OR5A1Q8NGJ0 315 aa13.69□□□□□ -0.22
PPP1CA-204ENST00000526510 ZNF25P17030 456 aaPredicted RBP13.68□□□□□ -0.22
PPP1CA-204ENST00000526510 SMAGPQ0VAQ4 97 aa13.68□□□□□ -0.22
PPP1CA-204ENST00000526510 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
PPP1CA-204ENST00000526510 C14orf144Q96I85 54 aa13.68□□□□□ -0.22
PPP1CA-204ENST00000526510 LYPD5Q6UWN5 251 aa13.67□□□□□ -0.22
PPP1CA-204ENST00000526510 TMEM101Q96IK0 257 aa13.67□□□□□ -0.22
PPP1CA-204ENST00000526510 TP73-AS1Q9UF72 201 aa13.66□□□□□ -0.22
PPP1CA-204ENST00000526510 IGKV2D-26A0A0A0MRZ7 120 aa13.66□□□□□ -0.22
PPP1CA-204ENST00000526510 UBE2D1P51668 147 aa13.66□□□□□ -0.22
PPP1CA-204ENST00000526510 LELP1Q5T871 98 aa13.66□□□□□ -0.22
PPP1CA-204ENST00000526510 CHAC1Q9BUX1 264 aa13.66□□□□□ -0.22
PPP1CA-204ENST00000526510 NHLRC4P0CG21 123 aaPredicted RBP13.65□□□□□ -0.22
PPP1CA-204ENST00000526510 MPV17L2Q567V2 206 aa13.65□□□□□ -0.22
PPP1CA-204ENST00000526510 C2orf88Q9BSF0 95 aa13.65□□□□□ -0.22
PPP1CA-204ENST00000526510 RBX1P62877 108 aa13.64□□□□□ -0.23
PPP1CA-204ENST00000526510 MIEN1Q9BRT3 115 aa13.64□□□□□ -0.23
PPP1CA-204ENST00000526510 A0A1B0GUV1 79 aa13.63□□□□□ -0.23
PPP1CA-204ENST00000526510 TMEM262E9PQX1 116 aa13.63□□□□□ -0.23
PPP1CA-204ENST00000526510 DDTP30046 118 aa13.63□□□□□ -0.23
PPP1CA-204ENST00000526510 TIRAPP58753 221 aa13.63□□□□□ -0.23
PPP1CA-204ENST00000526510 Q8N3U1 123 aa13.63□□□□□ -0.23
PPP1CA-204ENST00000526510 ZNF22P17026 224 aaPredicted RBP13.63□□□□□ -0.23
PPP1CA-204ENST00000526510 TINCRA0A1B0GVN0 87 aa13.62□□□□□ -0.23
PPP1CA-204ENST00000526510 ESRGQ1W209 222 aa13.61□□□□□ -0.23
PPP1CA-204ENST00000526510 TMEM170BQ5T4T1 132 aa13.61□□□□□ -0.23
PPP1CA-204ENST00000526510 FAM19A3Q7Z5A8 133 aa13.61□□□□□ -0.23
PPP1CA-204ENST00000526510 UQCR10Q9UDW1 63 aa13.61□□□□□ -0.23
PPP1CA-204ENST00000526510 TRAV13-1A0A0B4J241 112 aa13.6□□□□□ -0.23
PPP1CA-204ENST00000526510 LINC00587B1AMM8 73 aa13.6□□□□□ -0.23
PPP1CA-204ENST00000526510 COX8AP10176 69 aa13.6□□□□□ -0.23
PPP1CA-204ENST00000526510 NMUP48645 174 aa13.6□□□□□ -0.23
PPP1CA-204ENST00000526510 COX6A2Q02221 97 aa13.6□□□□□ -0.23
PPP1CA-204ENST00000526510 LINC00242Q5T6M2 205 aa13.6□□□□□ -0.23
PPP1CA-204ENST00000526510 PCP2Q8IVA1 136 aa13.59□□□□□ -0.23
PPP1CA-204ENST00000526510 TTTY13Q9BZ97 58 aa13.59□□□□□ -0.23
PPP1CA-204ENST00000526510 TMEM223A0PJW6 202 aa13.58□□□□□ -0.24
PPP1CA-204ENST00000526510 E9PLD3 99 aa13.58□□□□□ -0.24
PPP1CA-204ENST00000526510 SLC25A34Q6PIV7 304 aa13.57□□□□□ -0.24
PPP1CA-204ENST00000526510 IGLV5-45A0A087WSX0 123 aa13.56□□□□□ -0.24
PPP1CA-204ENST00000526510 BOD1L2Q8IYS8 172 aa13.56□□□□□ -0.24
PPP1CA-204ENST00000526510 C15orf53Q8NAA6 179 aa13.56□□□□□ -0.24
PPP1CA-204ENST00000526510 IGKV3OR2-268A0A0C4DH90 116 aa13.56□□□□□ -0.24
PPP1CA-204ENST00000526510 GEMIN7Q9H840 131 aaKnown RBP13.56□□□□□ -0.24
PPP1CA-204ENST00000526510 CDKN2A-AS1Q9UH64 79 aa13.56□□□□□ -0.24
PPP1CA-204ENST00000526510 TRAV8-6A0A0B4J262 113 aa13.55□□□□□ -0.24
PPP1CA-204ENST00000526510 IGLL5B9A064 214 aa13.55□□□□□ -0.24
PPP1CA-204ENST00000526510 WFDC10BQ8IUB3 73 aa13.55□□□□□ -0.24
PPP1CA-204ENST00000526510 MAPKAPK5-AS1Q8N8E1 139 aa13.55□□□□□ -0.24
PPP1CA-204ENST00000526510 LINC00469Q8N7U9 141 aa13.54□□□□□ -0.24
PPP1CA-204ENST00000526510 DYNC2H1Q8NCM8 4307 aaKnown RBP13.54□□□□□ -0.24
PPP1CA-204ENST00000526510 LINC00959A0A1B0GUT2 108 aa13.53□□□□□ -0.24
PPP1CA-204ENST00000526510 HERVK_113P61574 105 aa13.53□□□□□ -0.24
PPP1CA-204ENST00000526510 HERVK_113P63121 156 aa13.53□□□□□ -0.24
PPP1CA-204ENST00000526510 CLPSL2Q6UWE3 100 aa13.53□□□□□ -0.24
PPP1CA-204ENST00000526510 CSMD3Q7Z407 3707 aa13.53□□□□□ -0.24
PPP1CA-204ENST00000526510 TSPEAR-AS2P59090 65 aa13.53□□□□□ -0.24
PPP1CA-204ENST00000526510 LINC00269Q8N2A0 174 aa13.53□□□□□ -0.24
PPP1CA-204ENST00000526510 FBN3Q75N90 2809 aa13.53□□□□□ -0.24
PPP1CA-204ENST00000526510 IGHV3-64A0A075B6Q5 118 aa13.52□□□□□ -0.25
PPP1CA-204ENST00000526510 DLEU1O43261 78 aa13.52□□□□□ -0.25
PPP1CA-204ENST00000526510 ANGP03950 147 aaKnown RBP13.52□□□□□ -0.25
PPP1CA-204ENST00000526510 SEC11AP67812 179 aa13.52□□□□□ -0.25
PPP1CA-204ENST00000526510 TRAV8-3A0A0A6YYJ7 113 aa13.51□□□□□ -0.25
PPP1CA-204ENST00000526510 SPINK8P0C7L1 97 aa13.51□□□□□ -0.25
PPP1CA-204ENST00000526510 HNRNPA3P51991 378 aaKnown RBP13.51□□□□□ -0.25
PPP1CA-204ENST00000526510 C2orf91Q6ZV80 131 aa13.51□□□□□ -0.25
PPP1CA-204ENST00000526510 DNAH7Q8WXX0 4024 aa13.5□□□□□ -0.25
PPP1CA-204ENST00000526510 LEPROTO15243 131 aa13.5□□□□□ -0.25
PPP1CA-204ENST00000526510 IGHV3-30P01768 117 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms