RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 AMN1Q8IY45 258 aa4.24□□□□□ -1.73
CD44-221ENST00000526000 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
CD44-221ENST00000526000 NEXN-AS1Q8NBZ9 246 aa4.24□□□□□ -1.73
CD44-221ENST00000526000 RNF185Q96GF1 192 aa4.24□□□□□ -1.73
CD44-221ENST00000526000 K7EMI3 77 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 CRPP02741 224 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 APCSP02743 223 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 GAGE6Q13070 117 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 MPV17L2Q567V2 206 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 YPEL4Q96NS1 127 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 CHCHD5Q9BSY4 110 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 CHCHD7Q9BUK0 85 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 ST20Q9HBF5 79 aa4.23□□□□□ -1.73
CD44-221ENST00000526000 UBR4Q5T4S7 5183 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 IGLV10-54A0A075B6I4 117 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 TRBV27A0A0K0K1C4 114 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 SDHAF1A6NFY7 115 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 PRSS47A8MTI9 375 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 D6R8Y8 96 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 I3L3M4 83 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 VCYO14598 125 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 CHTF8P0CG12 524 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 POLR2KP53803 58 aaKnown RBP4.22□□□□□ -1.73
CD44-221ENST00000526000 SUMO2P61956 95 aaKnown RBP4.22□□□□□ -1.73
CD44-221ENST00000526000 SMAGPQ0VAQ4 97 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 Q0VG73 95 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 COTL1Q14019 142 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 C14orf177Q52M58 125 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 CBLN2Q8IUK8 224 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 NRACQ8N912 160 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 PRELID3AQ96N28 172 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 TRAPPC1Q9Y5R8 145 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
CD44-221ENST00000526000 TRBV25-1A0A075B6N4 114 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 TRBV6-8A0A0A6YYG3 113 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 TGIF2-C20orf24A0A0A6YYL0 155 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 TRAV26-2A0A0B4J265 109 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 LINC01549A6NIU2 74 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 H7C423 109 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 TNFRSF6BO95407 300 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 PMCHP20382 165 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 G0S2P27469 103 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 FABP9Q0Z7S8 132 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 IQCJQ1A5X6 159 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 SDIM1Q6ZPB5 146 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 LINC00269Q8N2A0 174 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 C9orf163Q8N9P6 203 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 KIR2DL4Q99706 377 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 MRPL18Q9H0U6 180 aaKnown RBP4.21□□□□□ -1.74
CD44-221ENST00000526000 MAP1LC3AQ9H492 121 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 NXT2Q9NPJ8 142 aaKnown RBP4.21□□□□□ -1.74
CD44-221ENST00000526000 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
CD44-221ENST00000526000 IGHV1-24A0A0C4DH33 117 aa4.2□□□□□ -1.74
CD44-221ENST00000526000 COLCA2A8K830 154 aa4.2□□□□□ -1.74
CD44-221ENST00000526000 RAB5AP20339 215 aa4.2□□□□□ -1.74
CD44-221ENST00000526000 RPS10P46783 165 aaKnown RBP4.2□□□□□ -1.74
CD44-221ENST00000526000 RBX1P62877 108 aa4.2□□□□□ -1.74
CD44-221ENST00000526000 NTM-AS1Q6ZSK4 140 aa4.2□□□□□ -1.74
CD44-221ENST00000526000 TMEM18Q96B42 140 aa4.2□□□□□ -1.74
CD44-221ENST00000526000 RPL39LQ96EH5 51 aaKnown RBP4.2□□□□□ -1.74
CD44-221ENST00000526000 SMIM2Q9BVW6 85 aa4.2□□□□□ -1.74
CD44-221ENST00000526000 A0A087WYN8 130 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 hDV102S1A0JD36 115 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 SMKR1H3BMG3 65 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 NPYP01303 97 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 FCER1GP30273 86 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 RAB5BP61020 215 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 ORMDL2Q53FV1 153 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 DGAT2L7PQ6IED9 249 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 KRTAP26-1Q6PEX3 210 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 Q8N8P6 123 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 ALKBH7Q9BT30 221 aaPredicted RBP4.19□□□□□ -1.74
CD44-221ENST00000526000 TMEM243Q9BU79 118 aa4.19□□□□□ -1.74
CD44-221ENST00000526000 IGKV3OR2-268A0A0C4DH90 116 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 A0A1B0GUV1 79 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 UBE2L6O14933 153 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 SLPIP03973 132 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 NPSP0C0P6 89 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 ESDP10768 282 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 ZNF25P17030 456 aaPredicted RBP4.18□□□□□ -1.74
CD44-221ENST00000526000 AMTP48728 403 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 MIAQ16674 131 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
CD44-221ENST00000526000 Q6ZRU5 148 aa4.18□□□□□ -1.74
CD44-221ENST00000526000 IGLV4-60A0A075B6I1 120 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 LINC01546A6NGU7 62 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 SCO1O75880 301 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 GAS8-AS1O95177 125 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 TSHBP01222 138 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 REG3AQ06141 175 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 KIAA1644Q3SXP7 199 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 MRPL52Q86TS9 123 aaKnown RBP4.17□□□□□ -1.74
CD44-221ENST00000526000 PRSS3P2Q8NHM4 247 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 TIMM21Q9BVV7 248 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 AP5S1Q9NUS5 200 aa4.17□□□□□ -1.74
CD44-221ENST00000526000 CSDC2Q9Y534 153 aaKnown RBP4.17□□□□□ -1.74
CD44-221ENST00000526000 IGHV3-64A0A075B6Q5 118 aa4.16□□□□□ -1.74
CD44-221ENST00000526000 IGKV2-24A0A0C4DH68 120 aa4.16□□□□□ -1.74
CD44-221ENST00000526000 TRGC2P03986 189 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms