RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	TIMM21	Q9BVV7	248 aa		7.74	□□□□□ -1.17
SPIDR-222	ENST00000524006	SMIM9	A6NGZ8	99 aa		7.73	□□□□□ -1.17
SPIDR-222	ENST00000524006	LEPROT	O15243	131 aa		7.73	□□□□□ -1.17
SPIDR-222	ENST00000524006	MAPKAPK5-AS1	Q8N8E1	139 aa		7.73	□□□□□ -1.17
SPIDR-222	ENST00000524006	RAB37	Q96AX2	223 aa		7.73	□□□□□ -1.17
SPIDR-222	ENST00000524006	CHCHD7	Q9BUK0	85 aa		7.73	□□□□□ -1.17
SPIDR-222	ENST00000524006	NHP2	Q9NX24	153 aa	Known RBP	7.73	□□□□□ -1.17
SPIDR-222	ENST00000524006		A0A0J9YXV3	536 aa		7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006		J3QQQ9	107 aa		7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006	GIG44	P09565	113 aa	Predicted RBP	7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006		Q6ZUT4	128 aa		7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006	OR5A1	Q8NGJ0	315 aa		7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006	CITED1	Q99966	193 aa		7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006	OVOL2	Q9BRP0	275 aa		7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006	TMEM243	Q9BU79	118 aa		7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006	UBE2D4	Q9Y2X8	147 aa		7.72	□□□□□ -1.17
SPIDR-222	ENST00000524006	TRBV6-4	A0A1B0GX49	114 aa		7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006	TMEM223	A0PJW6	202 aa		7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006	C9orf118	A6NHY6	69 aa		7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006	ZNF22	P17026	224 aa	Predicted RBP	7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006	MRPS36	P82909	103 aa	Known RBP	7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006	UBE2V1	Q13404	147 aa		7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006		Q6ZVH6	145 aa		7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006	SLC25A29	Q8N8R3	303 aa		7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006	AMELX	Q99217	191 aa		7.71	□□□□□ -1.18
SPIDR-222	ENST00000524006	IGHV3-64	A0A075B6Q5	118 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	TINCR	A0A1B0GVN0	87 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006		H3BUT2	72 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	DEFB130B	P0DP73	79 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	DEFB130A	P0DP74	79 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	FABP2	P12104	132 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	FXYD2	P54710	66 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	UBE2D3	P61077	147 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	UBE2D2	P62837	147 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	RNASE13	Q5GAN3	156 aa	Known RBP	7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	CSNK1G2-AS1	Q8NCQ2	148 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	KIR2DL5B	Q8NHK3	375 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	TM2D2	Q9BX73	214 aa		7.7	□□□□□ -1.18
SPIDR-222	ENST00000524006	TMEM238	C9JI98	176 aa		7.69	□□□□□ -1.18
SPIDR-222	ENST00000524006	CEMP1	Q6PRD7	247 aa	Predicted RBP	7.69	□□□□□ -1.18
SPIDR-222	ENST00000524006	SHISA2	Q6UWI4	295 aa		7.69	□□□□□ -1.18
SPIDR-222	ENST00000524006	PLAC8L1	A1L4L8	177 aa		7.68	□□□□□ -1.18
SPIDR-222	ENST00000524006	GAGE10	A6NGK3	116 aa		7.68	□□□□□ -1.18
SPIDR-222	ENST00000524006		H7C423	109 aa		7.68	□□□□□ -1.18
SPIDR-222	ENST00000524006	HERVK_113	P63121	156 aa		7.68	□□□□□ -1.18
SPIDR-222	ENST00000524006	DEFB135	Q30KP9	77 aa		7.68	□□□□□ -1.18
SPIDR-222	ENST00000524006	GTSF1L	Q9H1H1	148 aa		7.68	□□□□□ -1.18
SPIDR-222	ENST00000524006	LYRM9	A8MSI8	78 aa		7.67	□□□□□ -1.18
SPIDR-222	ENST00000524006		K7ERJ3	54 aa		7.67	□□□□□ -1.18
SPIDR-222	ENST00000524006	SAMD5	Q5TGI4	173 aa		7.67	□□□□□ -1.18
SPIDR-222	ENST00000524006	LYRM7	Q5U5X0	104 aa		7.67	□□□□□ -1.18
SPIDR-222	ENST00000524006	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.67	□□□□□ -1.18
SPIDR-222	ENST00000524006	NOTCH3	Q9UM47	2321 aa		7.66	□□□□□ -1.18
SPIDR-222	ENST00000524006		A0A1W2PPM0	123 aa		7.66	□□□□□ -1.18
SPIDR-222	ENST00000524006		J3QL48	77 aa		7.66	□□□□□ -1.18
SPIDR-222	ENST00000524006		K7EP34	96 aa		7.66	□□□□□ -1.18
SPIDR-222	ENST00000524006	TSPEAR-AS2	P59090	65 aa		7.66	□□□□□ -1.18
SPIDR-222	ENST00000524006	CHCHD5	Q9BSY4	110 aa		7.66	□□□□□ -1.18
SPIDR-222	ENST00000524006		Q9UF83	564 aa		7.66	□□□□□ -1.18
SPIDR-222	ENST00000524006	SPCS1	Q9Y6A9	102 aa		7.66	□□□□□ -1.18
SPIDR-222	ENST00000524006	IGHV1-58	A0A0C4DH39	117 aa		7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	SPINK8	P0C7L1	97 aa		7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	IGHV3-30-3	P0DP02	117 aa		7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	UBE2D1	P51668	147 aa		7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	DAD1	P61803	113 aa		7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	RPL24	P83731	157 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	C12orf74	Q32Q52	190 aa		7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	NAA38	Q9BRA0	125 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	CSDC2	Q9Y534	153 aa	Known RBP	7.65	□□□□□ -1.18
SPIDR-222	ENST00000524006	DNAH3	Q8TD57	4116 aa		7.65	□□□□□ -1.19
SPIDR-222	ENST00000524006	TRAV13-1	A0A0B4J241	112 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006		A0A0J9YY99	117 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	LOC100131303	A0A0U1RQF7	123 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	CCL25	O15444	150 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	MIF	P14174	115 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	GYPE	P15421	78 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	TIRAP	P58753	221 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	GAGE6	Q13070	117 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	FHL2	Q14192	279 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	FAM222A	Q5U5X8	452 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	NDUFA12	Q9UI09	145 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006		X6R8D5	127 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	NBEAL2	Q6ZNJ1	2754 aa		7.64	□□□□□ -1.19
SPIDR-222	ENST00000524006	TEX48	A0A1B0GUV7	120 aa		7.63	□□□□□ -1.19
SPIDR-222	ENST00000524006		K7EP13	123 aa		7.63	□□□□□ -1.19
SPIDR-222	ENST00000524006	CIRBP	Q14011	172 aa	Known RBP	7.63	□□□□□ -1.19
SPIDR-222	ENST00000524006	ATP6V0E2	Q8NHE4	81 aa		7.63	□□□□□ -1.19
SPIDR-222	ENST00000524006	VSIG2	Q96IQ7	327 aa		7.63	□□□□□ -1.19
SPIDR-222	ENST00000524006	PRO0255	Q9UI72	69 aa		7.63	□□□□□ -1.19
SPIDR-222	ENST00000524006	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.63	□□□□□ -1.19
SPIDR-222	ENST00000524006	TRAV8-3	A0A0A6YYJ7	113 aa		7.62	□□□□□ -1.19
SPIDR-222	ENST00000524006	PAX4	O43316	350 aa		7.62	□□□□□ -1.19
SPIDR-222	ENST00000524006	APOM	O95445	188 aa		7.62	□□□□□ -1.19
SPIDR-222	ENST00000524006	SBSPON	Q8IVN8	264 aa		7.62	□□□□□ -1.19
SPIDR-222	ENST00000524006	LINC00612	Q8N6U2	182 aa		7.62	□□□□□ -1.19
SPIDR-222	ENST00000524006	COPS9	Q8WXC6	57 aa		7.62	□□□□□ -1.19
SPIDR-222	ENST00000524006	TRBV6-8	A0A0A6YYG3	113 aa		7.61	□□□□□ -1.19
SPIDR-222	ENST00000524006	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.61	□□□□□ -1.19
SPIDR-222	ENST00000524006	IGHV4-28	A0A0C4DH34	117 aa		7.61	□□□□□ -1.19
SPIDR-222	ENST00000524006	IGKV3OR2-268	A0A0C4DH90	116 aa		7.61	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms