RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 P01737 135 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 PRSS1P07477 247 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 CTRLP40313 264 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 CNBPP62633 177 aaKnown RBP3.86□□□□□ -1.79
FAM49B-228ENST00000523993 CIRBPQ14011 172 aaKnown RBP3.86□□□□□ -1.79
FAM49B-228ENST00000523993 C15orf54Q8N8G6 183 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 FAM218AQ96MZ4 157 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 BIN3Q9NQY0 253 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 MUC21A0A0G2JKD1 596 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 MUC21A0A140T8X8 626 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 RAB19A4D1S5 217 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 NDUFS6O75380 124 aaKnown RBP3.85□□□□□ -1.79
FAM49B-228ENST00000523993 OXTP01178 125 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 TRGC1P0CF51 173 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 GZMBP10144 247 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 BCL2P10415 239 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 NTF3P20783 257 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 GNG4P50150 75 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 SEC61GP60059 68 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 REG3AQ06141 175 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 RASL11AQ6T310 242 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 SDIM1Q6ZPB5 146 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 SLC51BQ86UW2 128 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 LINC00269Q8N2A0 174 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 C20orf203Q8NBC4 194 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 OR2D3Q8NGH3 330 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 LYPD6BQ8NI32 183 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 DPH3P1Q9H4G8 78 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 NIT2Q9NQR4 276 aa3.85□□□□□ -1.79
FAM49B-228ENST00000523993 IFNA1P01562 189 aa3.84□□□□□ -1.79
FAM49B-228ENST00000523993 SLPIP03973 132 aa3.84□□□□□ -1.79
FAM49B-228ENST00000523993 FOXA3P55318 350 aaPredicted RBP3.84□□□□□ -1.79
FAM49B-228ENST00000523993 RIGQ13278 110 aa3.84□□□□□ -1.79
FAM49B-228ENST00000523993 LYZL1Q6UWQ5 148 aa3.84□□□□□ -1.79
FAM49B-228ENST00000523993 FAM210AQ96ND0 272 aa3.84□□□□□ -1.79
FAM49B-228ENST00000523993 MED9Q9NWA0 146 aa3.84□□□□□ -1.79
FAM49B-228ENST00000523993 IGLV4-60A0A075B6I1 120 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 PCP4L1A6NKN8 68 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 TMEM250H0YL14 139 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 H7C423 109 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 K7EN84 100 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 HLA-DQA1P01909 254 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 NKX2-5P52952 324 aaPredicted RBP3.83□□□□□ -1.8
FAM49B-228ENST00000523993 FAM231DQ6ZW35 169 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 STPG4Q8N801 248 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 TMEM243Q9BU79 118 aa3.83□□□□□ -1.8
FAM49B-228ENST00000523993 TNXBP22105 4242 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 NCR2O95944 276 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 MGPP08493 103 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 FAM74A3Q4VXF1 159 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 TEX261Q6UWH6 196 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 GATD1Q8NB37 220 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 GTSF1Q8WW33 167 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 RNF185Q96GF1 192 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 GFRA4Q9GZZ7 299 aa3.82□□□□□ -1.8
FAM49B-228ENST00000523993 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
FAM49B-228ENST00000523993 TRBV6-5A0A0K0K1A5 114 aa3.81□□□□□ -1.8
FAM49B-228ENST00000523993 FAM231BA6NCW3 169 aa3.81□□□□□ -1.8
FAM49B-228ENST00000523993 PANO1I0J062 215 aa3.81□□□□□ -1.8
FAM49B-228ENST00000523993 COTL1Q14019 142 aa3.81□□□□□ -1.8
FAM49B-228ENST00000523993 KIAA1644Q3SXP7 199 aa3.81□□□□□ -1.8
FAM49B-228ENST00000523993 CLPSL2Q6UWE3 100 aa3.81□□□□□ -1.8
FAM49B-228ENST00000523993 C15orf56Q8N910 161 aa3.81□□□□□ -1.8
FAM49B-228ENST00000523993 RNASE7Q9H1E1 156 aaKnown RBP3.81□□□□□ -1.8
FAM49B-228ENST00000523993 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 IGLV10-54A0A075B6I4 117 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 IGHV3-64A0A075B6Q5 118 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.8□□□□□ -1.8
FAM49B-228ENST00000523993 A8MWL6 223 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 UBE2L6O14933 153 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 ESDP10768 282 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 ZNF25P17030 456 aaPredicted RBP3.8□□□□□ -1.8
FAM49B-228ENST00000523993 HNRNPA3P51991 378 aaKnown RBP3.8□□□□□ -1.8
FAM49B-228ENST00000523993 RPL37AP61513 92 aaKnown RBP3.8□□□□□ -1.8
FAM49B-228ENST00000523993 Q6ZRU5 148 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 SPACA4Q8TDM5 124 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 PLAC8Q9NZF1 115 aa3.8□□□□□ -1.8
FAM49B-228ENST00000523993 CHTOPQ9Y3Y2 248 aaKnown RBP3.8□□□□□ -1.8
FAM49B-228ENST00000523993 GVQW2A0A096LPI5 108 aaPredicted RBP3.79□□□□□ -1.8
FAM49B-228ENST00000523993 TRAV26-2A0A0B4J265 109 aa3.79□□□□□ -1.8
FAM49B-228ENST00000523993 TRBV27A0A0K0K1C4 114 aa3.79□□□□□ -1.8
FAM49B-228ENST00000523993 SDHAF1A6NFY7 115 aa3.79□□□□□ -1.8
FAM49B-228ENST00000523993 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
FAM49B-228ENST00000523993 SMIM15Q7Z3B0 74 aa3.79□□□□□ -1.8
FAM49B-228ENST00000523993 RPL39LQ96EH5 51 aaKnown RBP3.79□□□□□ -1.8
FAM49B-228ENST00000523993 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
FAM49B-228ENST00000523993 TMEM191AQ9H0A3 160 aa3.79□□□□□ -1.8
FAM49B-228ENST00000523993 A0A087WYN8 130 aa3.78□□□□□ -1.8
FAM49B-228ENST00000523993 I3L3M4 83 aa3.78□□□□□ -1.8
FAM49B-228ENST00000523993 GATCO43716 136 aaKnown RBP3.78□□□□□ -1.8
FAM49B-228ENST00000523993 APCSP02743 223 aa3.78□□□□□ -1.8
FAM49B-228ENST00000523993 MT1HL1P0DM35 61 aa3.78□□□□□ -1.8
FAM49B-228ENST00000523993 FGF6P10767 208 aa3.78□□□□□ -1.8
FAM49B-228ENST00000523993 RPS10P46783 165 aaKnown RBP3.78□□□□□ -1.8
FAM49B-228ENST00000523993 UQCC3Q6UW78 93 aa3.78□□□□□ -1.8
FAM49B-228ENST00000523993 MRPL52Q86TS9 123 aaKnown RBP3.78□□□□□ -1.8
FAM49B-228ENST00000523993 LINC01551Q86U37 167 aa3.78□□□□□ -1.8
FAM49B-228ENST00000523993 AKAP14Q86UN6 197 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms