RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 C14orf178Q8N769 122 aaPredicted RBP3.4□□□□□ -1.87
CTNNA1-239ENST00000523685 C9orf85Q96MD7 179 aa3.4□□□□□ -1.87
CTNNA1-239ENST00000523685 SNHG12Q9BXW3 62 aa3.4□□□□□ -1.87
CTNNA1-239ENST00000523685 SAMD10Q9BYL1 202 aa3.4□□□□□ -1.87
CTNNA1-239ENST00000523685 SH3BGRL3Q9H299 93 aa3.4□□□□□ -1.87
CTNNA1-239ENST00000523685 JPT2Q9H910 190 aa3.4□□□□□ -1.87
CTNNA1-239ENST00000523685 Q9UF83 564 aa3.4□□□□□ -1.87
CTNNA1-239ENST00000523685 FAT3Q8TDW7 4589 aa3.4□□□□□ -1.87
CTNNA1-239ENST00000523685 TRBV24-1A0A075B6N3 115 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 A0A087WX48 190 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 TMEM262E9PQX1 116 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 K7EQM0 130 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 GZMBP10144 247 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 RNASE3P12724 160 aaKnown RBP3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 FABP4P15090 132 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 ZNF25P17030 456 aaPredicted RBP3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 FHITP49789 147 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 HNRNPA3P51991 378 aaKnown RBP3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 IQCJQ1A5X6 159 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 AKR1C8PQ5T2L2 129 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 FAM74A4Q5TZK3 123 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 NIT1Q86X76 327 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 ZNF664Q8N3J9 261 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 CYB561D1Q8N8Q1 229 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 C11orf52Q96A22 123 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 PRO1933Q9H354 126 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 TMEM242Q9NWH2 141 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 VAX2Q9UIW0 290 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 PSG8Q9UQ74 426 aa3.39□□□□□ -1.87
CTNNA1-239ENST00000523685 IGLV4-3A0A075B6K6 122 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 BORCS7-ASMTA0A0B4J1R7 106 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 A8MWV9 139 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 H3BVH4 76 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 TCRAP04437 139 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 CXCL1P09341 107 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 TRGC1P0CF51 173 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 ARL14EPLP0DKL9 152 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 LINC00694P0DN24 101 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 G0S2P27469 103 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 RPL12P30050 165 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 ASIPP42127 132 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 FGF8P55075 233 aaPredicted RBP3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 ZFP2Q6ZN57 461 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 C5orf17Q8NAS9 161 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 OR10G9Q8NGN4 311 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 OR2G3Q8NGZ4 309 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 WFDC1Q9HC57 220 aa3.38□□□□□ -1.87
CTNNA1-239ENST00000523685 TGIF2-C20orf24A0A0A6YYL0 155 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 IGKV3D-20A0A0C4DH25 116 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 SERTM2A0A1B0GWG4 89 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 GRIFINA4D1Z8 144 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 HLA-DQA1P01909 254 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 CRPP02741 224 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 PPBPP02775 128 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 SRP19P09132 144 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 TAGLN2P37802 199 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 CDC34P49427 236 aaPredicted RBP3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 NDUFV3P56181 108 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 RBX1P62877 108 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 RIGQ13278 110 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 TMEM241Q24JQ0 296 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 PTH2Q96A98 100 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 CHCHD5Q9BSY4 110 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 EIF5A2Q9GZV4 153 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 EPDR1Q9UM22 224 aa3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 CHTOPQ9Y3Y2 248 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-239ENST00000523685 TMSB15BA0A087X1C1 80 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 TRAV1-1A0A0B4J248 108 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 M0R381 172 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 ANGP03950 147 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 TRGC2P03986 189 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 ARMS2P0C7Q2 107 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 GCHFRP30047 84 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 Q0VG73 95 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 UFSP1Q6NVU6 142 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 DPH3Q96FX2 82 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 ZC2HC1AQ96GY0 325 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 ZFP30Q9Y2G7 519 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 ARL2-SNX15V9GYD0 113 aa3.36□□□□□ -1.87
CTNNA1-239ENST00000523685 FABP5P3A8MUU1 101 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 PANO1I0J062 215 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 STAG3L2P0CL84 134 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 STAG3L3P0CL85 134 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 UBE2G2P60604 165 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 RPS20P60866 119 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 MPV17L2Q567V2 206 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 PDZD11Q5EBL8 140 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 COL5A1-AS1Q5SY13 56 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 ENHOQ6UWT2 76 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 TEX43Q6ZNM6 134 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 Q8N377 158 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 ORAOV1Q8WV07 137 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 BTF3L4Q96K17 158 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 IMMP2LQ96T52 175 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 DPH3P1Q9H4G8 78 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 TMEM167BQ9NRX6 74 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 IL36BQ9NZH7 164 aa3.35□□□□□ -1.87
CTNNA1-239ENST00000523685 PHLDA3Q9Y5J5 127 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms