RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	GAS8-AS1	O95177	125 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	TFF1	P04155	84 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	LINC00869	P0C866	280 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	ZNF705D	P0CH99	300 aa	Predicted RBP	3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	ZNF705B	P0CI00	300 aa	Predicted RBP	3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	ARL14EPL	P0DKL9	152 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636		Q0VG73	95 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	PMCHL1	Q16048	86 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	KIAA1644	Q3SXP7	199 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636		Q6AWC8	147 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	EBLN2	Q6P2I7	272 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	AMTN	Q6UX39	209 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	TRPT1	Q86TN4	253 aa	Known RBP	3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	TMEM167A	Q8TBQ9	72 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	RNF5	Q99942	180 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	TMEM191A	Q9H0A3	160 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	ST20	Q9HBF5	79 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	OSTC	Q9NRP0	149 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	KAAG1	Q9UBP8	84 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	PYGO1	Q9Y3Y4	419 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	NACA	E9PAV3	2078 aa		3.59	□□□□□ -1.83
PABPC1-223	ENST00000523636	IGHV7-81	A0A0B4J1V7	117 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	TRAV3	A0A0B4J244	114 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	FAM236A	A0A1B0GUQ0	79 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	FAM236B	A0A1B0GV22	79 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	COX7A2P2	O60397	106 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	IGHV3-7	P01780	117 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	IFITM1	P13164	125 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	CRISP2	P16562	243 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	NPPC	P23582	126 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	FOXA3	P55318	350 aa	Predicted RBP	3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	LGALS9B	Q3B8N2	356 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	C10orf113	Q5VZT2	155 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	MORN3	Q6PF18	240 aa	Predicted RBP	3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	BAGE3	Q86Y29	109 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	BAGE2	Q86Y30	109 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	C3orf22	Q8N5N4	141 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	H1FX	Q92522	213 aa	Known RBP	3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	LEAP2	Q969E1	77 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	SLC25A2	Q9BXI2	301 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	NDUFA4L2	Q9NRX3	87 aa		3.58	□□□□□ -1.84
PABPC1-223	ENST00000523636	TRBV20OR9-2	A0A075B6H5	130 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	TRAV41	A0A0B4J266	112 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	COX7A2L	O14548	114 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	IGLV2-11	P01706	119 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	RBP4	P02753	201 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	SMR3B	P02814	79 aa	Predicted RBP	3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	SCGB1C2	P0DMR2	95 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	RNASE2	P10153	161 aa	Known RBP	3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	MIR17HG	Q75NE6	70 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	KTN1-AS1	Q86SY8	53 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	FAM216B	Q8N7L0	139 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	CMTM2	Q8TAZ6	248 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	PMCHL2	Q9BQD1	86 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	OCR1	Q9BZK8	76 aa		3.57	□□□□□ -1.84
PABPC1-223	ENST00000523636	ZNF253	O75346	499 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	IGHV3-48	P01763	117 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	HLA-DQA1	P01909	254 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	SAA1	P0DJI8	122 aa	Predicted RBP	3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	ZNF137P	P52743	207 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	UBE2G1	P62253	170 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	UBE2L3	P68036	154 aa	Known RBP	3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	ATP5G2	Q06055	141 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	BVES-AS1	Q5T3Y7	98 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636		Q6ZUT4	128 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	CSNK1G2-AS1	Q8NCQ2	148 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	DCANP1	Q8TF63	244 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	TOMM6	Q96B49	74 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	TRGV9	Q99603	122 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	KRTAP1-5	Q9BYS1	174 aa		3.56	□□□□□ -1.84
PABPC1-223	ENST00000523636	DSCAML1	Q8TD84	2053 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	SMIM27	A0A1W2PRY6	76 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	NDUFC2-KCTD14	E9PQ53	114 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	IGLV2-8	P01709	118 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	APCS	P02743	223 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	IGKV1-16	P04430	117 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	CHTF8	P0CG12	524 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	IGHV1-8	P0DP01	117 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	MGST1	P10620	155 aa	Known RBP	3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	PSMB8	P28062	276 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	RPL27A	P46776	148 aa	Known RBP	3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	HINT1	P49773	126 aa	Predicted RBP	3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	HES1	Q14469	280 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	SPATA45	Q537H7	98 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	SPATA12	Q7Z6I5	190 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	BRK1	Q8WUW1	75 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	DPM3	Q9P2X0	92 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636	TP73-AS1	Q9UF72	201 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636		V9GYV3	84 aa		3.55	□□□□□ -1.84
PABPC1-223	ENST00000523636		A0A087WW49	117 aa		3.54	□□□□□ -1.84
PABPC1-223	ENST00000523636	IGHV3-16	A0A0C4DH30	117 aa		3.54	□□□□□ -1.84
PABPC1-223	ENST00000523636	TRBV7-6	A0A0J9YX20	115 aa		3.54	□□□□□ -1.84
PABPC1-223	ENST00000523636	OR2T8	A6NH00	312 aa		3.54	□□□□□ -1.84
PABPC1-223	ENST00000523636	RPL37AP8	A6NKH3	93 aa		3.54	□□□□□ -1.84
PABPC1-223	ENST00000523636		A8MWL6	223 aa		3.54	□□□□□ -1.84
PABPC1-223	ENST00000523636		M0R1W7	72 aa		3.54	□□□□□ -1.84
PABPC1-223	ENST00000523636		M0R378	163 aa		3.54	□□□□□ -1.84
PABPC1-223	ENST00000523636	PEX7	O00628	323 aa		3.54	□□□□□ -1.84

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