RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 NRACQ8N912 160 aa10.74□□□□□ -0.69
PABPC1-221ENST00000522720 PCLOQ9Y6V0 5065 aa10.74□□□□□ -0.69
PABPC1-221ENST00000522720 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.73□□□□□ -0.69
PABPC1-221ENST00000522720 IGKV2-29A2NJV5 120 aaPredicted RBP10.73□□□□□ -0.69
PABPC1-221ENST00000522720 ESDP10768 282 aa10.73□□□□□ -0.69
PABPC1-221ENST00000522720 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
PABPC1-221ENST00000522720 MRPL18Q9H0U6 180 aaKnown RBP10.73□□□□□ -0.69
PABPC1-221ENST00000522720 IGLV10-54A0A075B6I4 117 aa10.72□□□□□ -0.69
PABPC1-221ENST00000522720 USP17L23D6RBM5 183 aa10.72□□□□□ -0.69
PABPC1-221ENST00000522720 VCYO14598 125 aa10.72□□□□□ -0.69
PABPC1-221ENST00000522720 FGF6P10767 208 aa10.72□□□□□ -0.69
PABPC1-221ENST00000522720 CKS2P33552 79 aa10.72□□□□□ -0.69
PABPC1-221ENST00000522720 SUMO2P61956 95 aaKnown RBP10.71□□□□□ -0.69
PABPC1-221ENST00000522720 RNASEKQ6P5S7 137 aaKnown RBP10.71□□□□□ -0.69
PABPC1-221ENST00000522720 DNAH8Q96JB1 4490 aa10.71□□□□□ -0.7
PABPC1-221ENST00000522720 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
PABPC1-221ENST00000522720 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
PABPC1-221ENST00000522720 FAM30AQ9NZY2 134 aa10.7□□□□□ -0.7
PABPC1-221ENST00000522720 LAMTOR2Q9Y2Q5 125 aa10.7□□□□□ -0.7
PABPC1-221ENST00000522720 C20orf78Q9BR46 151 aa10.69□□□□□ -0.7
PABPC1-221ENST00000522720 PHOX2AO14813 284 aa10.68□□□□□ -0.7
PABPC1-221ENST00000522720 TRGC2P03986 189 aa10.68□□□□□ -0.7
PABPC1-221ENST00000522720 LINC01620Q4KN68 170 aa10.68□□□□□ -0.7
PABPC1-221ENST00000522720 Q6ZSA8 131 aa10.68□□□□□ -0.7
PABPC1-221ENST00000522720 TMEM101Q96IK0 257 aa10.68□□□□□ -0.7
PABPC1-221ENST00000522720 KIR2DL4Q99706 377 aa10.68□□□□□ -0.7
PABPC1-221ENST00000522720 ABCA13Q86UQ4 5058 aa10.68□□□□□ -0.7
PABPC1-221ENST00000522720 IGKV3OR2-268A0A0C4DH90 116 aa10.67□□□□□ -0.7
PABPC1-221ENST00000522720 C1orf196B1AJZ1 125 aa10.67□□□□□ -0.7
PABPC1-221ENST00000522720 PRSS1P07477 247 aa10.67□□□□□ -0.7
PABPC1-221ENST00000522720 FCER1GP30273 86 aa10.67□□□□□ -0.7
PABPC1-221ENST00000522720 RPL32P62910 135 aaKnown RBP10.67□□□□□ -0.7
PABPC1-221ENST00000522720 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
PABPC1-221ENST00000522720 FAT1Q14517 4588 aa10.67□□□□□ -0.7
PABPC1-221ENST00000522720 D6R8Y8 96 aa10.66□□□□□ -0.7
PABPC1-221ENST00000522720 TNFRSF6BO95407 300 aa10.66□□□□□ -0.7
PABPC1-221ENST00000522720 HAMPP81172 84 aa10.66□□□□□ -0.7
PABPC1-221ENST00000522720 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
PABPC1-221ENST00000522720 OR5A1Q8NGJ0 315 aa10.66□□□□□ -0.7
PABPC1-221ENST00000522720 PRELID3AQ96N28 172 aa10.66□□□□□ -0.7
PABPC1-221ENST00000522720 EPM2AB3EWF7 344 aa10.65□□□□□ -0.7
PABPC1-221ENST00000522720 KIAA1644Q3SXP7 199 aa10.65□□□□□ -0.7
PABPC1-221ENST00000522720 CDC42SE2Q9NRR3 84 aa10.65□□□□□ -0.7
PABPC1-221ENST00000522720 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
PABPC1-221ENST00000522720 CHCHD10Q8WYQ3 142 aaPredicted RBP10.64□□□□□ -0.71
PABPC1-221ENST00000522720 ALKBH7Q9BT30 221 aaPredicted RBP10.64□□□□□ -0.71
PABPC1-221ENST00000522720 TCAPO15273 167 aa10.63□□□□□ -0.71
PABPC1-221ENST00000522720 NPYP01303 97 aa10.63□□□□□ -0.71
PABPC1-221ENST00000522720 SMR3BP02814 79 aaPredicted RBP10.63□□□□□ -0.71
PABPC1-221ENST00000522720 RAB5BP61020 215 aa10.63□□□□□ -0.71
PABPC1-221ENST00000522720 ZNF664Q8N3J9 261 aa10.63□□□□□ -0.71
PABPC1-221ENST00000522720 SMIM2Q9BVW6 85 aa10.63□□□□□ -0.71
PABPC1-221ENST00000522720 CSDC2Q9Y534 153 aaKnown RBP10.63□□□□□ -0.71
PABPC1-221ENST00000522720 LINC00959A0A1B0GUT2 108 aa10.62□□□□□ -0.71
PABPC1-221ENST00000522720 PRSS47A8MTI9 375 aa10.62□□□□□ -0.71
PABPC1-221ENST00000522720 SMAGPQ0VAQ4 97 aa10.62□□□□□ -0.71
PABPC1-221ENST00000522720 C9orf163Q8N9P6 203 aa10.62□□□□□ -0.71
PABPC1-221ENST00000522720 MAP1LC3AQ9H492 121 aa10.62□□□□□ -0.71
PABPC1-221ENST00000522720 hDV102S1A0JD36 115 aa10.61□□□□□ -0.71
PABPC1-221ENST00000522720 CFAP161Q6P656 301 aa10.61□□□□□ -0.71
PABPC1-221ENST00000522720 TMEM18Q96B42 140 aa10.61□□□□□ -0.71
PABPC1-221ENST00000522720 UBE2D4Q9Y2X8 147 aa10.61□□□□□ -0.71
PABPC1-221ENST00000522720 PRSS3P2Q8NHM4 247 aa10.6□□□□□ -0.71
PABPC1-221ENST00000522720 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
PABPC1-221ENST00000522720 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
PABPC1-221ENST00000522720 K7EMI3 77 aa10.59□□□□□ -0.71
PABPC1-221ENST00000522720 CNBPP62633 177 aaKnown RBP10.59□□□□□ -0.71
PABPC1-221ENST00000522720 FOXI1Q12951 378 aa10.59□□□□□ -0.71
PABPC1-221ENST00000522720 SS18Q15532 418 aa10.59□□□□□ -0.71
PABPC1-221ENST00000522720 Q5VSD8 79 aa10.59□□□□□ -0.71
PABPC1-221ENST00000522720 C15orf56Q8N910 161 aa10.59□□□□□ -0.71
PABPC1-221ENST00000522720 CHAC1Q9BUX1 264 aa10.59□□□□□ -0.71
PABPC1-221ENST00000522720 AP5S1Q9NUS5 200 aa10.59□□□□□ -0.71
PABPC1-221ENST00000522720 FAM229AH3BQW9 127 aa10.58□□□□□ -0.72
PABPC1-221ENST00000522720 CCL25O15444 150 aa10.58□□□□□ -0.72
PABPC1-221ENST00000522720 SLPIP03973 132 aa10.58□□□□□ -0.72
PABPC1-221ENST00000522720 G0S2P27469 103 aa10.58□□□□□ -0.72
PABPC1-221ENST00000522720 XCL1P47992 114 aa10.58□□□□□ -0.72
PABPC1-221ENST00000522720 BAGE3Q86Y29 109 aa10.58□□□□□ -0.72
PABPC1-221ENST00000522720 SCXQ7RTU7 201 aa10.57□□□□□ -0.72
PABPC1-221ENST00000522720 C18orf32Q8TCD1 76 aa10.57□□□□□ -0.72
PABPC1-221ENST00000522720 SRRM2Q9UQ35 2752 aaKnown RBP10.56□□□□□ -0.72
PABPC1-221ENST00000522720 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-221ENST00000522720 LOC389332A0A1B0GUA5 103 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 LINC00614P0C842 121 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 RPL39P62891 51 aaKnown RBP10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-221ENST00000522720 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 SDIM1Q6ZPB5 146 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 Q8N8P6 123 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
PABPC1-221ENST00000522720 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms