RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 Q8NAQ8 132 aa13□□□□□ -0.33
FAM49B-214ENST00000519540 TMEM223A0PJW6 202 aa13□□□□□ -0.33
FAM49B-214ENST00000519540 ZNF25P17030 456 aaPredicted RBP13□□□□□ -0.33
FAM49B-214ENST00000519540 CSDC2Q9Y534 153 aaKnown RBP13□□□□□ -0.33
FAM49B-214ENST00000519540 STAB1Q9NY15 2570 aa12.99□□□□□ -0.33
FAM49B-214ENST00000519540 ORAOV1Q8WV07 137 aa12.99□□□□□ -0.33
FAM49B-214ENST00000519540 SEC11AP67812 179 aa12.98□□□□□ -0.33
FAM49B-214ENST00000519540 TMEM243Q9BU79 118 aa12.98□□□□□ -0.33
FAM49B-214ENST00000519540 TINCRA0A1B0GVN0 87 aa12.97□□□□□ -0.33
FAM49B-214ENST00000519540 ZNF815PA8K554 130 aa12.97□□□□□ -0.33
FAM49B-214ENST00000519540 PRO0255Q9UI72 69 aa12.97□□□□□ -0.33
FAM49B-214ENST00000519540 A8MZ25 164 aa12.96□□□□□ -0.33
FAM49B-214ENST00000519540 UBE2D1P51668 147 aa12.96□□□□□ -0.34
FAM49B-214ENST00000519540 TSPEAR-AS2P59090 65 aa12.96□□□□□ -0.34
FAM49B-214ENST00000519540 SMAGPQ0VAQ4 97 aa12.96□□□□□ -0.34
FAM49B-214ENST00000519540 Q6ZVH6 145 aa12.96□□□□□ -0.34
FAM49B-214ENST00000519540 GYPEP15421 78 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 TRBV6-8A0A0A6YYG3 113 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 H7C423 109 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 J3QQQ9 107 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 TAX1BP3O14907 124 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 UBE2L6O14933 153 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 LEPROTO15243 131 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 DAD1P61803 113 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 CELA1Q9UNI1 258 aa12.95□□□□□ -0.34
FAM49B-214ENST00000519540 TAL2Q16559 108 aa12.94□□□□□ -0.34
FAM49B-214ENST00000519540 CDC42SE2Q9NRR3 84 aa12.94□□□□□ -0.34
FAM49B-214ENST00000519540 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
FAM49B-214ENST00000519540 GCSHP23434 173 aa12.93□□□□□ -0.34
FAM49B-214ENST00000519540 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
FAM49B-214ENST00000519540 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
FAM49B-214ENST00000519540 A6NDN8 102 aa12.93□□□□□ -0.34
FAM49B-214ENST00000519540 SPART-AS1P0CW21 52 aa12.93□□□□□ -0.34
FAM49B-214ENST00000519540 ATP6V0E2Q8NHE4 81 aa12.93□□□□□ -0.34
FAM49B-214ENST00000519540 PLEKHB2Q96CS7 222 aa12.93□□□□□ -0.34
FAM49B-214ENST00000519540 TM2D2Q9BX73 214 aa12.93□□□□□ -0.34
FAM49B-214ENST00000519540 PAX4O43316 350 aa12.92□□□□□ -0.34
FAM49B-214ENST00000519540 LGALS3P17931 250 aaKnown RBP12.92□□□□□ -0.34
FAM49B-214ENST00000519540 TIRAPP58753 221 aa12.92□□□□□ -0.34
FAM49B-214ENST00000519540 CEND1Q8N111 149 aa12.92□□□□□ -0.34
FAM49B-214ENST00000519540 MAST4O15021 2626 aa12.91□□□□□ -0.34
FAM49B-214ENST00000519540 IGHV3-64A0A075B6Q5 118 aa12.91□□□□□ -0.34
FAM49B-214ENST00000519540 G3V4G9 280 aa12.91□□□□□ -0.34
FAM49B-214ENST00000519540 SCGB1D4Q6XE38 83 aa12.91□□□□□ -0.34
FAM49B-214ENST00000519540 TMEM101Q96IK0 257 aa12.91□□□□□ -0.34
FAM49B-214ENST00000519540 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
FAM49B-214ENST00000519540 FXYD2P54710 66 aa12.91□□□□□ -0.34
FAM49B-214ENST00000519540 HIST1H4GQ99525 98 aa12.91□□□□□ -0.34
FAM49B-214ENST00000519540 FAM19A3Q7Z5A8 133 aa12.9□□□□□ -0.34
FAM49B-214ENST00000519540 LINC00469Q8N7U9 141 aa12.9□□□□□ -0.34
FAM49B-214ENST00000519540 VSIG2Q96IQ7 327 aa12.9□□□□□ -0.34
FAM49B-214ENST00000519540 IGLV5-45A0A087WSX0 123 aa12.89□□□□□ -0.35
FAM49B-214ENST00000519540 K7EP13 123 aa12.89□□□□□ -0.35
FAM49B-214ENST00000519540 ATP5G1P05496 136 aa12.89□□□□□ -0.35
FAM49B-214ENST00000519540 IGHV3-30-3P0DP02 117 aa12.89□□□□□ -0.35
FAM49B-214ENST00000519540 GAGE6Q13070 117 aa12.89□□□□□ -0.35
FAM49B-214ENST00000519540 LINC00242Q5T6M2 205 aa12.89□□□□□ -0.35
FAM49B-214ENST00000519540 PKD1L1Q8TDX9 2849 aa12.89□□□□□ -0.35
FAM49B-214ENST00000519540 TRAV8-3A0A0A6YYJ7 113 aa12.88□□□□□ -0.35
FAM49B-214ENST00000519540 IGHV1-58A0A0C4DH39 117 aa12.88□□□□□ -0.35
FAM49B-214ENST00000519540 A0A0J9YY99 117 aa12.88□□□□□ -0.35
FAM49B-214ENST00000519540 COX6A2Q02221 97 aa12.88□□□□□ -0.35
FAM49B-214ENST00000519540 CHCHD5Q9BSY4 110 aa12.88□□□□□ -0.35
FAM49B-214ENST00000519540 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
FAM49B-214ENST00000519540 TRAV13-1A0A0B4J241 112 aa12.87□□□□□ -0.35
FAM49B-214ENST00000519540 H3BRM9 83 aa12.87□□□□□ -0.35
FAM49B-214ENST00000519540 PTTG1IPP53801 180 aa12.87□□□□□ -0.35
FAM49B-214ENST00000519540 HERVK_113P63121 156 aa12.87□□□□□ -0.35
FAM49B-214ENST00000519540 RETNQ9HD89 108 aa12.87□□□□□ -0.35
FAM49B-214ENST00000519540 COL6A5A8TX70 2615 aa12.87□□□□□ -0.35
FAM49B-214ENST00000519540 SPINK8P0C7L1 97 aa12.86□□□□□ -0.35
FAM49B-214ENST00000519540 SAMD5Q5TGI4 173 aa12.86□□□□□ -0.35
FAM49B-214ENST00000519540 F5H768 121 aa12.85□□□□□ -0.35
FAM49B-214ENST00000519540 IGLV4-60A0A075B6I1 120 aa12.84□□□□□ -0.35
FAM49B-214ENST00000519540 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
FAM49B-214ENST00000519540 A0A096LPF7 62 aa12.84□□□□□ -0.35
FAM49B-214ENST00000519540 TEX48A0A1B0GUV7 120 aa12.84□□□□□ -0.35
FAM49B-214ENST00000519540 SMIM13P0DJ93 91 aa12.84□□□□□ -0.35
FAM49B-214ENST00000519540 SRSF9Q13242 221 aaKnown RBP eCLIP12.84□□□□□ -0.35
FAM49B-214ENST00000519540 SPANXB1Q9NS25 103 aaPredicted RBP12.83□□□□□ -0.36
FAM49B-214ENST00000519540 CMYA5Q8N3K9 4069 aa12.83□□□□□ -0.36
FAM49B-214ENST00000519540 NHP2Q9NX24 153 aaKnown RBP12.83□□□□□ -0.36
FAM49B-214ENST00000519540 HTN3P15516 51 aa12.82□□□□□ -0.36
FAM49B-214ENST00000519540 C10orf126Q8N4M7 172 aa12.82□□□□□ -0.36
FAM49B-214ENST00000519540 RAB37Q96AX2 223 aa12.82□□□□□ -0.36
FAM49B-214ENST00000519540 C9orf118A6NHY6 69 aa12.81□□□□□ -0.36
FAM49B-214ENST00000519540 C12orf74Q32Q52 190 aa12.81□□□□□ -0.36
FAM49B-214ENST00000519540 NDUFA12Q9UI09 145 aa12.8□□□□□ -0.36
FAM49B-214ENST00000519540 IGLV5-39A0A0G2JS06 123 aa12.79□□□□□ -0.36
FAM49B-214ENST00000519540 A0A0J9YXY3 114 aa12.79□□□□□ -0.36
FAM49B-214ENST00000519540 A0A1B0GUV1 79 aa12.79□□□□□ -0.36
FAM49B-214ENST00000519540 K7ERJ3 54 aa12.79□□□□□ -0.36
FAM49B-214ENST00000519540 ZFAND6Q6FIF0 208 aa12.79□□□□□ -0.36
FAM49B-214ENST00000519540 TMEM262E9PQX1 116 aa12.79□□□□□ -0.36
FAM49B-214ENST00000519540 VAMP3Q15836 100 aa12.79□□□□□ -0.36
FAM49B-214ENST00000519540 MRPL23Q16540 153 aaKnown RBP12.79□□□□□ -0.36
FAM49B-214ENST00000519540 SMIM1B2RUZ4 78 aa12.78□□□□□ -0.36
FAM49B-214ENST00000519540 IGHV3-30P01768 117 aa12.78□□□□□ -0.36
FAM49B-214ENST00000519540 IGHV3-30-5P0DP03 117 aa12.78□□□□□ -0.36
FAM49B-214ENST00000519540 RBX1P62877 108 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms