RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 S100A7L2Q5SY68 101 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 ZNF826PQ6ZT77 177 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 KLF14Q8TD94 323 aaPredicted RBP3.68□□□□□ -1.82
SQLE-203ENST00000518931 CYYR1Q96J86 154 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 ANAPC11Q9NYG5 84 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 NUMA1Q14980 2115 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 SCN3AQ9NY46 2000 aa3.68□□□□□ -1.82
SQLE-203ENST00000518931 IGLV10-54A0A075B6I4 117 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 LINC01546A6NGU7 62 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 H7BZZ5 65 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 FCER1GP30273 86 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 Q6JHZ5 121 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 LYPD5Q6UWN5 251 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 C2orf82Q6UX34 121 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 ST20-AS1Q8NBB2 130 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 TMEM254Q8TBM7 123 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 ARHGAP5-AS1Q96IT6 56 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 PRO1854Q9UHT4 67 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 ZNF831Q5JPB2 1677 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 MYO16Q9Y6X6 1858 aa3.67□□□□□ -1.82
SQLE-203ENST00000518931 TRBV30A0A0K0K1B3 111 aa3.66□□□□□ -1.82
SQLE-203ENST00000518931 C5orf67F2Z3F1 127 aa3.66□□□□□ -1.82
SQLE-203ENST00000518931 FXYD3Q14802 87 aa3.66□□□□□ -1.82
SQLE-203ENST00000518931 KIAA2026Q5HYC2 2103 aa3.66□□□□□ -1.82
SQLE-203ENST00000518931 UBALD1Q8TB05 177 aa3.66□□□□□ -1.82
SQLE-203ENST00000518931 CYP4F30PQ9H0H9 118 aa3.66□□□□□ -1.82
SQLE-203ENST00000518931 TMEM167BQ9NRX6 74 aa3.66□□□□□ -1.82
SQLE-203ENST00000518931 IGKV1D-42A0A075B6H8 117 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 IGKV1D-17A0A075B6S4 117 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 A0A1B0GU33 70 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 HIGD1CA8MV81 97 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 IQCF6A8MYZ5 107 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 KLKP1Q107X0 134 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 C9orf116Q5BN46 136 aaPredicted RBP3.65□□□□□ -1.83
SQLE-203ENST00000518931 Q8NAQ8 132 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 LINC00474Q9P2X8 69 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 R4GMQ9 66 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 PLXNB2O15031 1838 aa3.65□□□□□ -1.83
SQLE-203ENST00000518931 NCOA6Q14686 2063 aaPredicted RBP3.64□□□□□ -1.83
SQLE-203ENST00000518931 SSC5DA1L4H1 1573 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 TRAV13-2A0A0B4J235 113 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 TRBV10-3A0A0K0K1G6 114 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 K7EMI3 77 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 ERC2-IT1O76042 136 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 IGHV3-33P01772 117 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 ARL14EPLP0DKL9 152 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 MIFP14174 115 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 FAM223AQ8IWN6 122 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 MINOS1-NBL1R4GNA1 71 aa3.64□□□□□ -1.83
SQLE-203ENST00000518931 COL27A1Q8IZC6 1860 aaPredicted RBP3.64□□□□□ -1.83
SQLE-203ENST00000518931 FAM223BA6NKX1 122 aa3.63□□□□□ -1.83
SQLE-203ENST00000518931 PLNP26678 52 aa3.63□□□□□ -1.83
SQLE-203ENST00000518931 C20orf166-AS1Q96NR2 134 aa3.63□□□□□ -1.83
SQLE-203ENST00000518931 PROK2Q9HC23 129 aa3.63□□□□□ -1.83
SQLE-203ENST00000518931 PCDH15Q96QU1 1955 aa3.63□□□□□ -1.83
SQLE-203ENST00000518931 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
SQLE-203ENST00000518931 HMGN2P05204 90 aaKnown RBP3.62□□□□□ -1.83
SQLE-203ENST00000518931 TRAV10A0A0B4J240 114 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 TRAV12-1A0A0B4J245 112 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 C16orf90A8MZG2 172 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 COX6CP09669 75 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 IAPPP10997 89 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 HMGA1P17096 107 aaKnown RBP3.61□□□□□ -1.83
SQLE-203ENST00000518931 FXYD4P59646 89 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 TFF3Q07654 80 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 ZNF818PQ6ZRF7 136 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 TMEM263Q8WUH6 116 aaKnown RBP3.61□□□□□ -1.83
SQLE-203ENST00000518931 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 UBE2D4Q9Y2X8 147 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 DOCK11Q5JSL3 2073 aa3.61□□□□□ -1.83
SQLE-203ENST00000518931 KIAA1549LQ6ZVL6 1849 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 COL4A4P53420 1690 aaPredicted RBP3.6□□□□□ -1.83
SQLE-203ENST00000518931 IGLV3-32A0A0A0MS00 114 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 IGHV3-30P01768 117 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 IGHV3-30-5P0DP03 117 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 PLGLAQ15195 96 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 ATP5EP2Q5VTU8 51 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 C20orf197Q8N268 126 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 LINC00167Q96N53 147 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 TIMM8BQ9Y5J9 83 aaPredicted RBP3.6□□□□□ -1.83
SQLE-203ENST00000518931 MALRD1Q5VYJ5 2156 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 MGAMO43451 1857 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 EML5Q05BV3 1969 aa3.6□□□□□ -1.83
SQLE-203ENST00000518931 TMEM30CPA0ZSE6 113 aa3.59□□□□□ -1.83
SQLE-203ENST00000518931 HCG22E2RYF7 251 aa3.59□□□□□ -1.83
SQLE-203ENST00000518931 SFTA2Q6UW10 78 aa3.59□□□□□ -1.83
SQLE-203ENST00000518931 VMO1Q7Z5L0 202 aa3.59□□□□□ -1.83
SQLE-203ENST00000518931 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.83
SQLE-203ENST00000518931 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
SQLE-203ENST00000518931 SNRNP200O75643 2136 aaKnown RBP3.58□□□□□ -1.84
SQLE-203ENST00000518931 IGHV3OR16-8A0A075B7F1 116 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 TRAV40A0A0B4J280 105 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 A0A0J9YX75 114 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 A0A0J9YY99 117 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 A0A1B0GUT8 65 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 H3BSH0 61 aa3.58□□□□□ -1.84
SQLE-203ENST00000518931 PSCAO43653 123 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms