RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PLAC8Q9NZF1 115 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 IL36BQ9NZH7 164 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 KLK9Q9UKQ9 250 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 HHLA3Q9XRX5 114 aa2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 RBM7Q9Y580 266 aaKnown RBP2.36□□□□□ -2.03
HMGB1P23-201ENST00000518743 TRGV4A0A0C4DH28 118 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 IGLC7A0M8Q6 106 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 C11orf86A6NJI1 115 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 FABP5P3A8MUU1 101 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 ZNF73O43830 326 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 CRYBA4P53673 196 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 HMGN3Q15651 99 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 OR8D4Q8NGM9 314 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 C2orf50Q96LR7 162 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 PRRT1Q99946 306 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 ENY2Q9NPA8 101 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 CMC2Q9NRP2 79 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 BAIAP2Q9UQB8 552 aa2.35□□□□□ -2.03
HMGB1P23-201ENST00000518743 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.03
HMGB1P23-201ENST00000518743 K7EIM0 57 aa2.34□□□□□ -2.03
HMGB1P23-201ENST00000518743 LEPROTO15243 131 aa2.34□□□□□ -2.03
HMGB1P23-201ENST00000518743 GADD45GO95257 159 aa2.34□□□□□ -2.03
HMGB1P23-201ENST00000518743 ZNF90Q03938 601 aa2.34□□□□□ -2.03
HMGB1P23-201ENST00000518743 KRTAP19-2Q3LHN2 52 aa2.34□□□□□ -2.03
HMGB1P23-201ENST00000518743 DIRC1Q969H9 104 aa2.34□□□□□ -2.03
HMGB1P23-201ENST00000518743 Q9BRP9 147 aa2.34□□□□□ -2.03
HMGB1P23-201ENST00000518743 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.04
HMGB1P23-201ENST00000518743 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 MUC21A0A0G2JKD1 596 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 FAM236DA0A1B0GTK5 79 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 ZNF670-ZNF695F2Z2N8 137 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 ATG12O94817 140 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 IFNA7P01567 189 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 SULT1A3P0DMM9 295 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 SULT1A4P0DMN0 295 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 FAM236CP0DP71 79 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 SMIM11AP58511 58 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 HSPE1P61604 102 aaKnown RBP2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 RHOBP62745 196 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 KRTAP19-6Q3LI70 58 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 SAMD13Q5VXD3 122 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 PACRGLQ8N7B6 248 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 DNAJC30Q96LL9 226 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 TTTY13Q9BZ97 58 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 RPRMQ9NS64 109 aa2.33□□□□□ -2.04
HMGB1P23-201ENST00000518743 MUC21A0A140T8X8 626 aa2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 H7BYZ3 331 aa2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 MT-ND6P03923 174 aa2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 RPS20P60866 119 aaKnown RBP2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 AADACL3Q5VUY0 350 aa2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 TMEM244Q5VVB8 128 aa2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 OR5D14Q8NGL3 314 aa2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 TEX47Q8TBZ9 253 aa2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 GPR146Q96CH1 333 aa2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 FLGP20930 4061 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P23-201ENST00000518743 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 HTR1AP08908 422 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 TRAPPC2P0DI81 140 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 TRAPPC2BP0DI82 140 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 S100A4P26447 101 aaKnown RBP2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 HINT1P49773 126 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 RAB14P61106 215 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 MEF2BQ02080 365 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 NDUFA5Q16718 116 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 OR51A4Q8NGJ6 313 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 IMMP2LQ96T52 175 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 DERL1Q9BUN8 251 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 MRPL32Q9BYC8 188 aaKnown RBP2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 UQCC1Q9NVA1 299 aa2.31□□□□□ -2.04
HMGB1P23-201ENST00000518743 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 TMEM238C9JI98 176 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 H7C2G1 150 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 IFNA1P01562 189 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 LGALS3P17931 250 aaKnown RBP2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 FXYD2P54710 66 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 YPEL3P61236 119 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 ERHP84090 104 aaKnown RBP2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 WT1-ASQ06250 92 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 C1orf137Q5JT78 98 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 LYRM7Q5U5X0 104 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 Q6Q795 121 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 GOLT1AQ6ZVE7 132 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 LSM10Q969L4 123 aaKnown RBP2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 SCGB3A1Q96QR1 104 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 BANF2Q9H503 90 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 SLC39A9Q9NUM3 307 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 NAT8Q9UHE5 227 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 GNG8Q9UK08 70 aa2.3□□□□□ -2.04
HMGB1P23-201ENST00000518743 A0A1B0GVG6 124 aa2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 FNDC10F2Z333 226 aa2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 I3L2K1 104 aa2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 SFTA3P0C7M3 94 aa2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 METTL15P1P0C7V9 234 aa2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 ZNF93P35789 620 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 RPL28P46779 137 aaKnown RBP2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 TMEM258P61165 79 aa2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 HIST1H1AQ02539 215 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 OR13C6PQ8NH95 151 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms