RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 ALKBH7Q9BT30 221 aaPredicted RBP0.85□□□□□ -2.27
RNU6-548P-201ENST00000517083 MND1Q9BWT6 205 aa0.85□□□□□ -2.27
RNU6-548P-201ENST00000517083 ZNF471Q9BX82 626 aaPredicted RBP0.85□□□□□ -2.27
RNU6-548P-201ENST00000517083 KRTAP3-1Q9BYR8 98 aa0.85□□□□□ -2.27
RNU6-548P-201ENST00000517083 TMEM126AQ9H061 195 aa0.85□□□□□ -2.27
RNU6-548P-201ENST00000517083 KCNIP3Q9Y2W7 256 aa0.85□□□□□ -2.27
RNU6-548P-201ENST00000517083 IGLV5-37A0A075B6J1 123 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 TRAV13-1A0A0B4J241 112 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 GRIFINA4D1Z8 144 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 FABP5P3A8MUU1 101 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 SYNGR2O43760 224 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 ERC2-IT1O76042 136 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 PRSS2P07478 247 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 TMBIM6P55061 237 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 CKS1BP61024 79 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 SSTP61278 116 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 UBE2L3P68036 154 aaKnown RBP0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 SMAGPQ0VAQ4 97 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 IL18Q14116 193 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 SCGB2B2Q4G0G5 96 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 PCP2Q8IVA1 136 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 AP3S1Q92572 193 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 AP1S3Q96PC3 154 aa0.84□□□□□ -2.27
RNU6-548P-201ENST00000517083 TMSB15BA0A087X1C1 80 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 IGHV3OR16-9A0A0B4J2B5 98 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 IGKV3D-20A0A0C4DH25 116 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 SERTM2A0A1B0GWG4 89 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 SMIM30A4D0T7 59 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 TMEM238C9JI98 176 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 UPK1BO75841 260 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 NCR2O95944 276 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 METTL15P1P0C7V9 234 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 ANXA3P12429 323 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 CALB2P22676 271 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 TAS2R30P59541 319 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 BAXQ07812 192 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 KRTAP15-1Q3LI76 137 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 RNASE10Q5GAN6 216 aaKnown RBP0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 SPANXN2Q5MJ10 180 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 SAPCD1Q5SSQ6 148 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 MIC13Q5XKP0 118 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 RASL11AQ6T310 242 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 GLYATL2Q8WU03 294 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 RAB24Q969Q5 203 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 MRAP2Q96G30 205 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 OBSCN-AS1Q96MR7 158 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 MGST2Q99735 147 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 SEC22CQ9BRL7 303 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 MRPS26Q9BYN8 205 aaKnown RBP0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 ACOT13Q9NPJ3 140 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 NUDT15Q9NV35 164 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 PSENENQ9NZ42 101 aa0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 RSL24D1Q9UHA3 163 aaKnown RBP0.83□□□□□ -2.28
RNU6-548P-201ENST00000517083 TGIF2-C20orf24A0A0A6YYL0 155 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 TRAV1-2A0A0B4J238 106 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 LOC100130705A0A1B0GUX0 176 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 KRTAP9-6A8MVA2 160 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 H7C2G1 150 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 M0QY20 66 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 CTDSP2O14595 271 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 TMEM127O75204 238 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 SLC25A6P12236 298 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 FOXA3P55318 350 aaPredicted RBP0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 DEFA3P59666 94 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 FLI1Q01543 452 aaPredicted RBP0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 SPHARQ15513 63 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 LINC00483Q53H64 154 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 SUMO4Q6EEV6 95 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 C2orf82Q6UX34 121 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 TMEM91Q6ZNR0 172 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 MIR17HGQ75NE6 70 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 SMCR5Q8TEV8 140 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 APH1BQ8WW43 257 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 ANP32BQ92688 251 aaKnown RBP0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 S100A16Q96FQ6 103 aaKnown RBP0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 Q96NJ1 140 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 GGACTQ9BVM4 153 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 SLC25A2Q9BXI2 301 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 NIT2Q9NQR4 276 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 OTORQ9NRC9 128 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 TXNL4BQ9NX01 149 aaKnown RBP0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 TOMM7Q9P0U1 55 aa0.82□□□□□ -2.28
RNU6-548P-201ENST00000517083 UBE2L5PA0A1B0GUS4 154 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 ETDCA0A1B0GVM5 59 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 SMIM31A0A1B0GVY4 71 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 A0A1W2PNM2 257 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 A8MWL6 223 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 KRBOX1C9JBD0 128 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 M0R378 163 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 SSSCA1O60232 199 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 PMCHP20382 165 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 RPL29P47914 159 aaKnown RBP0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 TAS2R45P59539 299 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 AP3S2P59780 193 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 GNG5P63218 68 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 S100A12P80511 92 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 FABP5Q01469 135 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 Q1RN00 199 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 KRTAP19-8Q3LI54 63 aa0.81□□□□□ -2.28
RNU6-548P-201ENST00000517083 KHDC3LQ587J8 217 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms