RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 CCL25O15444 150 aa3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 ATP5LO75964 103 aa3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 RPL39P62891 51 aaKnown RBP3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 SEC11AP67812 179 aa3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 CFAP161Q6P656 301 aa3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 LINC00336Q6ZUF6 198 aa3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 UBE2D4Q9Y2X8 147 aa3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 PYGO1Q9Y3Y4 419 aa3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 DNAH9Q9NYC9 4486 aa3.69□□□□□ -1.82
SCARNA16.4-201ENST00000516956 IGLV4-60A0A075B6I1 120 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 IGLV10-54A0A075B6I4 117 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 PRSS1P07477 247 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 NPSP0C0P6 89 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 MALP21145 153 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 MRPS36P82909 103 aaKnown RBP3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 C14orf177Q52M58 125 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 Q6ZR54 194 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 ERASQ7Z444 233 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 Q8N3U1 123 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 TOMM6Q96B49 74 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 TIMM17AQ99595 171 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 GEMIN7Q9H840 131 aaKnown RBP3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 CDC42SE2Q9NRR3 84 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HSPB8Q9UJY1 196 aa3.68□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HUWE1Q7Z6Z7 4374 aaKnown RBP3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 LINC00959A0A1B0GUT2 108 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 GAGE12HA6NDE8 117 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 LINC01546A6NGU7 62 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 PRSS29PA6NIE9 313 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 SERF1AO75920 110 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 LEPROTL1O95214 131 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 APOMO95445 188 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 FABP4P15090 132 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 S100A2P29034 98 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 XCL1P47992 114 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 PMVKQ15126 192 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 PMCHL1Q16048 86 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 RNASE13Q5GAN3 156 aaKnown RBP3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 ENHOQ6UWT2 76 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 Q6ZUT4 128 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 PRR34Q9NV39 138 aa3.67□□□□□ -1.82
SCARNA16.4-201ENST00000516956 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 H0Y8G0 127 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 COX7A2LO14548 114 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BKO60814 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BJP06899 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BOP23527 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BBP33778 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BDP58876 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BCP62807 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST2H2BEQ16778 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 FAM19A2Q8N3H0 131 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BHQ93079 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 IFI27L1Q96BM0 104 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 PACRGQ96M98 296 aaPredicted RBP3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BNQ99877 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 HIST1H2BMQ99879 126 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 MAP1LC3CQ9BXW4 147 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 KRTAP1-5Q9BYS1 174 aa3.66□□□□□ -1.82
SCARNA16.4-201ENST00000516956 IGIPA6NJ69 53 aa3.65□□□□□ -1.83
SCARNA16.4-201ENST00000516956 H3BRM9 83 aa3.65□□□□□ -1.83
SCARNA16.4-201ENST00000516956 ZNF561-AS1K7EIQ3 104 aa3.65□□□□□ -1.83
SCARNA16.4-201ENST00000516956 PRSS2P07478 247 aa3.65□□□□□ -1.83
SCARNA16.4-201ENST00000516956 HERVK_113P63121 156 aa3.65□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CD164L2Q6UWJ8 174 aa3.65□□□□□ -1.83
SCARNA16.4-201ENST00000516956 BAALCQ8WXS3 180 aa3.65□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CSMD3Q7Z407 3707 aa3.65□□□□□ -1.83
SCARNA16.4-201ENST00000516956 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 IGHV1-58A0A0C4DH39 117 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 hDV102S1A0JD36 115 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 C20orf202A1L168 122 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 LECT2O14960 151 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 PDZD11Q5EBL8 140 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 C5orf38Q86SI9 138 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 LINC00469Q8N7U9 141 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 URB1-AS1Q96HZ7 61 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CST9LQ9H4G1 147 aa3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CHTOPQ9Y3Y2 248 aaKnown RBP3.64□□□□□ -1.83
SCARNA16.4-201ENST00000516956 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 A0A087WTM6 91 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 A0A0J9YXV3 536 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 TINCRA0A1B0GVN0 87 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 USP17L23D6RBM5 183 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 RTL8CO15255 209 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 UBE2D1P51668 147 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 AKR1D1P51857 326 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 TNP2Q05952 138 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 TMEM170BQ5T4T1 132 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 AMELXQ99217 191 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CHAC1Q9BUX1 264 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 PGPEP1Q9NXJ5 209 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 PKIGQ9Y2B9 76 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 DNAH7Q8WXX0 4024 aa3.63□□□□□ -1.83
SCARNA16.4-201ENST00000516956 IGLV5-52A0A0A0MRZ9 124 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 TRAV12-1A0A0B4J245 112 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 NUPR1O60356 82 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms