RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 IGKV3OR2-268A0A0C4DH90 116 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 TRBV7-7A0A0K0K1E9 115 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 TRBV10-3A0A0K0K1G6 114 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 A0A1B0GUV1 79 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 J3KT08 172 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 COX7CP15954 63 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 PFN2P35080 140 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 SLURP1P55000 103 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 APOC4P55056 127 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 RBM3P98179 157 aaKnown RBP1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 DEFB113Q30KQ7 82 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 ADAMTSL4-AS1Q5T5F5 129 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 LINC00242Q5T6M2 205 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 CEMP1Q6PRD7 247 aaPredicted RBP1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 Q6ZQT7 251 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 Q8N2B8 174 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 CLEC2BQ92478 149 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 LINC00526Q96FQ7 95 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 ZNF625Q96I27 306 aaPredicted RBP1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 MAP6D1Q9H9H5 199 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 NOP10Q9NPE3 64 aaKnown RBP1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 SS18L2Q9UHA2 77 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 LAMTOR3Q9UHA4 124 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 PRO0628Q9UI54 55 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 CHD9Q3L8U1 2897 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 PTPRZ1P23471 2315 aaPredicted RBP1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 AKAP6Q13023 2319 aa1.5□□□□□ -2.17
RNU1-40P-201ENST00000516816 HTTP42858 3142 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 A0A087WZ39 114 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 TRBV6-8A0A0A6YYG3 113 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGLV5-39A0A0G2JS06 123 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 FAM236AA0A1B0GUQ0 79 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 FAM236BA0A1B0GV22 79 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 LYRM9A8MSI8 78 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 A8MTW9 85 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 NDUFC2-KCTD14E9PQ53 114 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 C19orf84I3L1E1 186 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 NDUFC1O43677 76 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 NDUFC2O95298 119 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 CCKP06307 115 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 RNASE1P07998 156 aaKnown RBP1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 LORP23490 312 aaPredicted RBP1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 PROK1P58294 105 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 TSPEAR-AS2P59090 65 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 DEFB1P60022 68 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 CD164Q04900 197 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 RBMY1FQ15415 496 aaKnown RBP1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 CDSNQ15517 529 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 RNASE13Q5GAN3 156 aaKnown RBP1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 Q6JHZ5 121 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 FAM19A5Q7Z5A7 132 aaPredicted RBP1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 Q8IZM0 81 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 MIR7-3HGQ8N6C7 128 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 SERP2Q8N6R1 65 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 C16orf95Q9H693 158 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 ZNF702PQ9H963 129 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 PRO0255Q9UI72 69 aa1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 KLK5Q9Y337 293 aaPredicted RBP1.49□□□□□ -2.17
RNU1-40P-201ENST00000516816 MAP1BP46821 2468 aaKnown RBP1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 OTOGLQ3ZCN5 2332 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 LOC107984640A0A0U1RRK4 108 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 LINC00959A0A1B0GUT2 108 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 A0A1B0GW54 56 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 SMIM1B2RUZ4 78 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 CCDC179H3BU77 68 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 LECT2O14960 151 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 CRLF1O75462 422 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 ANGP03950 147 aaKnown RBP1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 SPART-AS1P0CW21 52 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGHV4-31P0DP07 118 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 DEFB130BP0DP73 79 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 DEFB130AP0DP74 79 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 CRYGAP11844 174 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 RPL35AP18077 110 aaKnown RBP1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 TMEM258P61165 79 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 DAD1P61803 113 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 HAMPP81172 84 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 COX6A2Q02221 97 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 RPL18AQ02543 176 aaKnown RBP1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 C9orf66Q5T8R8 295 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 Q6ZTI0 123 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 LINC00336Q6ZUF6 198 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 C5orf38Q86SI9 138 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 C1orf158Q8N1D5 194 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 Q8N814 137 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 C11orf72Q8NBR9 251 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 SMIM11BQ8TCY0 68 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 Q96MF0 132 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 LITAFQ99732 161 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 MKI67P46013 3256 aaKnown RBP1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 BRCA2P51587 3418 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 CACNA1HO95180 2353 aa1.48□□□□□ -2.17
RNU1-40P-201ENST00000516816 DOPEY2Q9Y3R5 2298 aa1.47□□□□□ -2.17
RNU1-40P-201ENST00000516816 EP300Q09472 2414 aaPredicted RBP1.47□□□□□ -2.17
RNU1-40P-201ENST00000516816 A0A0C4DFX4 3053 aa1.47□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGHV3OR16-9A0A0B4J2B5 98 aa1.47□□□□□ -2.17
RNU1-40P-201ENST00000516816 TRBV7-6A0A0J9YX20 115 aa1.47□□□□□ -2.17
RNU1-40P-201ENST00000516816 A0A0U1RQV1 116 aa1.47□□□□□ -2.17
RNU1-40P-201ENST00000516816 A0A1W2PPR1 153 aa1.47□□□□□ -2.17
RNU1-40P-201ENST00000516816 IGLV1-51P01701 117 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms