RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RPL28P46779 137 aaKnown RBP4.34□□□□□ -1.72
USP38-203ENST00000511739 CCKP06307 115 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 OXLD1Q5BKU9 147 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 DCANP1Q8TF63 244 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 TP53TG3Q9ULZ0 132 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 ODF3BA8MYP8 253 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
USP38-203ENST00000511739 WFDC13Q8IUB5 93 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 EXPH5Q8NEV8 1989 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 KMT2EQ8IZD2 1858 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 K7EQG2 157 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 P0C879 139 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 ODF3Q96PU9 254 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 SPANXB1Q9NS25 103 aaPredicted RBP4.33□□□□□ -1.72
USP38-203ENST00000511739 C3orf84H3BNL1 204 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 MLST8Q9BVC4 326 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 IGLV2-14P01704 120 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 MPLKIPQ8TAP9 179 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 HIVEP3Q5T1R4 2406 aa4.33□□□□□ -1.72
USP38-203ENST00000511739 TRBV6-4A0A1B0GX49 114 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 J3KT08 172 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 PLA2G2AP14555 144 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 LINC01006Q8NI28 216 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 RPL37AP8A6NKH3 93 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 IBA57-AS1B1ANH7 110 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 CTRLP40313 264 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 IGLV2-8P01709 118 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 LELP1Q5T871 98 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 LINC00337Q8N6G1 96 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 CCDC140Q96MF4 163 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 PRRC2AP48634 2157 aaKnown RBP4.32□□□□□ -1.72
USP38-203ENST00000511739 M0R378 163 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 CLUHP3Q96NS8 147 aa4.32□□□□□ -1.72
USP38-203ENST00000511739 TNRC6AQ8NDV7 1962 aaKnown RBP4.31□□□□□ -1.72
USP38-203ENST00000511739 CPAMD8Q8IZJ3 1885 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 PLA2G2EQ9NZK7 142 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 C6orf99Q4VX62 202 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 COA6Q5JTJ3 125 aaKnown RBP4.31□□□□□ -1.72
USP38-203ENST00000511739 SLPIP03973 132 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 TTTY13Q9BZ97 58 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 LINC00173Q6ZV60 143 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 C20orf197Q8N268 126 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 LINC00526Q96FQ7 95 aa4.31□□□□□ -1.72
USP38-203ENST00000511739 FXYD2P54710 66 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 RBX1P62877 108 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 MRPL55Q7Z7F7 128 aaKnown RBP4.3□□□□□ -1.72
USP38-203ENST00000511739 CDKN2A-AS1Q9UH64 79 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 U3KQK5 164 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 C1orf134Q5TEV5 83 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 LINC00643Q86TS7 51 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 DSCAML1Q8TD84 2053 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 G3V4G9 280 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 EIF4EBP1Q13541 118 aaPredicted RBP4.3□□□□□ -1.72
USP38-203ENST00000511739 CD164L2Q6UWJ8 174 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 A0A0J9YXY3 114 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 IGLV2-11P01706 119 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 Q6ZPA2 131 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 FAM167A-AS1Q96KT0 104 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 HIGD1BQ9P298 99 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 ATG2AQ2TAZ0 1938 aa4.3□□□□□ -1.72
USP38-203ENST00000511739 CFAP126Q5VTH2 177 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 V9GYY9 64 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 ABCA2Q9BZC7 2435 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 ENHOQ6UWT2 76 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 E7EUB6 86 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 LST1O00453 97 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 A6NED7 52 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 TDRG1Q3Y452 100 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 TNRC6BQ9UPQ9 1833 aaKnown RBP4.29□□□□□ -1.72
USP38-203ENST00000511739 PRR14LQ5THK1 2151 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 M0QXV9 152 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 MSMPQ1L6U9 139 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 PIK3CD-AS1Q5SR53 167 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 PSMG3-AS1Q96PY0 264 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 EML5Q05BV3 1969 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 ARHGAP21Q5T5U3 1957 aa4.29□□□□□ -1.72
USP38-203ENST00000511739 FAM240AA0A1B0GVK7 77 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 WFDC2Q14508 124 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 WFDC10AQ9H1F0 79 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 C10orf99Q6UWK7 81 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 ZFAND3Q9H8U3 227 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 ATP5EP2Q5VTU8 51 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 SDIM1Q6ZPB5 146 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 Q6ZQY7 126 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 PIEZO1Q92508 2521 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 KIAA1549Q9HCM3 1950 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 C1orf137Q5JT78 98 aa4.28□□□□□ -1.72
USP38-203ENST00000511739 MRGPRG-AS1Q2M3A8 158 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 LINC01556Q5JQF7 62 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 ZNF702PQ9H963 129 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 SMR3AQ99954 134 aa4.27□□□□□ -1.73
USP38-203ENST00000511739 ANKHD1Q8IWZ3 2542 aaKnown RBP4.27□□□□□ -1.73
USP38-203ENST00000511739 PRR4Q16378 134 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms