RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 Q6ZUT4 128 aa6.95□□□□□ -1.3
NR1I3-227ENST00000510951 FA2HQ7L5A8 372 aa6.95□□□□□ -1.3
NR1I3-227ENST00000510951 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
NR1I3-227ENST00000510951 TMEM18Q96B42 140 aa6.95□□□□□ -1.3
NR1I3-227ENST00000510951 C1orf43Q9BWL3 253 aa6.95□□□□□ -1.3
NR1I3-227ENST00000510951 PRR34Q9NV39 138 aa6.95□□□□□ -1.3
NR1I3-227ENST00000510951 ORMDL2Q53FV1 153 aa6.94□□□□□ -1.3
NR1I3-227ENST00000510951 C18orf32Q8TCD1 76 aa6.94□□□□□ -1.3
NR1I3-227ENST00000510951 RMI2Q96E14 147 aa6.94□□□□□ -1.3
NR1I3-227ENST00000510951 SMAGPQ0VAQ4 97 aa6.93□□□□□ -1.3
NR1I3-227ENST00000510951 MIAQ16674 131 aa6.93□□□□□ -1.3
NR1I3-227ENST00000510951 C2orf66Q6UXQ4 117 aa6.93□□□□□ -1.3
NR1I3-227ENST00000510951 OPRPNQ99935 248 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-227ENST00000510951 TM2D2Q9BX73 214 aa6.93□□□□□ -1.3
NR1I3-227ENST00000510951 CYSLTR1Q9Y271 337 aa6.93□□□□□ -1.3
NR1I3-227ENST00000510951 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
NR1I3-227ENST00000510951 DNAH10Q8IVF4 4471 aa6.92□□□□□ -1.3
NR1I3-227ENST00000510951 K7EMI3 77 aa6.92□□□□□ -1.3
NR1I3-227ENST00000510951 LECT2O14960 151 aa6.92□□□□□ -1.3
NR1I3-227ENST00000510951 ZNF664Q8N3J9 261 aa6.92□□□□□ -1.3
NR1I3-227ENST00000510951 TIMM21Q9BVV7 248 aa6.92□□□□□ -1.3
NR1I3-227ENST00000510951 CDC42SE2Q9NRR3 84 aa6.92□□□□□ -1.3
NR1I3-227ENST00000510951 SPANXA1Q9NS26 97 aa6.92□□□□□ -1.3
NR1I3-227ENST00000510951 A0A087WTM6 91 aa6.91□□□□□ -1.3
NR1I3-227ENST00000510951 WFDC2Q14508 124 aa6.91□□□□□ -1.3
NR1I3-227ENST00000510951 PMCHL1Q16048 86 aa6.91□□□□□ -1.3
NR1I3-227ENST00000510951 MAPKAPK5-AS1Q8N8E1 139 aa6.91□□□□□ -1.3
NR1I3-227ENST00000510951 BAALCQ8WXS3 180 aa6.91□□□□□ -1.3
NR1I3-227ENST00000510951 URB1-AS1Q96HZ7 61 aa6.91□□□□□ -1.3
NR1I3-227ENST00000510951 CSDC2Q9Y534 153 aaKnown RBP6.91□□□□□ -1.3
NR1I3-227ENST00000510951 DNAH17Q9UFH2 4485 aa6.9□□□□□ -1.3
NR1I3-227ENST00000510951 IGLV4-3A0A075B6K6 122 aa6.9□□□□□ -1.3
NR1I3-227ENST00000510951 A0A1B0GVY2 172 aa6.9□□□□□ -1.3
NR1I3-227ENST00000510951 LINC01546A6NGU7 62 aa6.9□□□□□ -1.3
NR1I3-227ENST00000510951 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.3
NR1I3-227ENST00000510951 FAM104AQ969W3 186 aa6.9□□□□□ -1.3
NR1I3-227ENST00000510951 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
NR1I3-227ENST00000510951 COX11Q9Y6N1 276 aa6.9□□□□□ -1.3
NR1I3-227ENST00000510951 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 TRAV8-4A0A0B4J246 113 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 LRCOL1A6NCL2 159 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 GAGE12HA6NDE8 117 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 LINC00614P0C842 121 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 XCL1P47992 114 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 MRPS36P82909 103 aaKnown RBP6.89□□□□□ -1.31
NR1I3-227ENST00000510951 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 CHCHD10Q8WYQ3 142 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-227ENST00000510951 TOMM6Q96B49 74 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 FAT2Q9NYQ8 4349 aa6.89□□□□□ -1.31
NR1I3-227ENST00000510951 IFITM10A6NMD0 228 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 EREGO14944 169 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 CCL25O15444 150 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 RAB5BP61020 215 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 SS18Q15532 418 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 ZC2HC1BQ5TFG8 222 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 SCGB3A1Q96QR1 104 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 PYGO1Q9Y3Y4 419 aa6.88□□□□□ -1.31
NR1I3-227ENST00000510951 A0A096LNJ9 63 aa6.87□□□□□ -1.31
NR1I3-227ENST00000510951 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
NR1I3-227ENST00000510951 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
NR1I3-227ENST00000510951 HBDP02042 147 aa6.87□□□□□ -1.31
NR1I3-227ENST00000510951 G0S2P27469 103 aa6.87□□□□□ -1.31
NR1I3-227ENST00000510951 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
NR1I3-227ENST00000510951 Q6ZN92 141 aa6.87□□□□□ -1.31
NR1I3-227ENST00000510951 TEX43Q6ZNM6 134 aa6.87□□□□□ -1.31
NR1I3-227ENST00000510951 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-227ENST00000510951 FOXI1Q12951 378 aa6.86□□□□□ -1.31
NR1I3-227ENST00000510951 LINC00173Q6ZV60 143 aa6.86□□□□□ -1.31
NR1I3-227ENST00000510951 ERASQ7Z444 233 aa6.86□□□□□ -1.31
NR1I3-227ENST00000510951 Q8N814 137 aa6.86□□□□□ -1.31
NR1I3-227ENST00000510951 CHCHD1Q96BP2 118 aaKnown RBP6.86□□□□□ -1.31
NR1I3-227ENST00000510951 TIMM17AQ99595 171 aa6.86□□□□□ -1.31
NR1I3-227ENST00000510951 C2orf88Q9BSF0 95 aa6.86□□□□□ -1.31
NR1I3-227ENST00000510951 A6NJY4 79 aa6.85□□□□□ -1.31
NR1I3-227ENST00000510951 C1orf196B1AJZ1 125 aa6.85□□□□□ -1.31
NR1I3-227ENST00000510951 HSBP1O75506 76 aa6.85□□□□□ -1.31
NR1I3-227ENST00000510951 SERF1AO75920 110 aa6.85□□□□□ -1.31
NR1I3-227ENST00000510951 LINC00310P59036 64 aa6.85□□□□□ -1.31
NR1I3-227ENST00000510951 VCX2Q9H322 139 aa6.85□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BKO60814 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BJP06899 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BOP23527 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BBP33778 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BDP58876 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BCP62807 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST2H2BEQ16778 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIGD2BQ4VC39 106 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.84□□□□□ -1.31
NR1I3-227ENST00000510951 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BHQ93079 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BNQ99877 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 HIST1H2BMQ99879 126 aa6.84□□□□□ -1.31
NR1I3-227ENST00000510951 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
NR1I3-227ENST00000510951 LINC01549A6NIU2 74 aa6.83□□□□□ -1.32
NR1I3-227ENST00000510951 C16orf90A8MZG2 172 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms