RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SLPIP03973 132 aa9.51□□□□□ -0.89
UBE2D3-228ENST00000508974 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
UBE2D3-228ENST00000508974 SDIM1Q6ZPB5 146 aa9.51□□□□□ -0.89
UBE2D3-228ENST00000508974 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-228ENST00000508974 ESDP10768 282 aa9.5□□□□□ -0.89
UBE2D3-228ENST00000508974 ZNF25P17030 456 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-228ENST00000508974 XCL1P47992 114 aa9.5□□□□□ -0.89
UBE2D3-228ENST00000508974 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-228ENST00000508974 OR5A1Q8NGJ0 315 aa9.5□□□□□ -0.89
UBE2D3-228ENST00000508974 IGHV3-64A0A075B6Q5 118 aa9.49□□□□□ -0.89
UBE2D3-228ENST00000508974 TRBV27A0A0K0K1C4 114 aa9.49□□□□□ -0.89
UBE2D3-228ENST00000508974 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
UBE2D3-228ENST00000508974 CHTF8P0CG12 524 aa9.49□□□□□ -0.89
UBE2D3-228ENST00000508974 FCER1GP30273 86 aa9.49□□□□□ -0.89
UBE2D3-228ENST00000508974 KRTAP10-4P60372 401 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-228ENST00000508974 MRPL51Q4U2R6 128 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-228ENST00000508974 NRACQ8N912 160 aa9.49□□□□□ -0.89
UBE2D3-228ENST00000508974 C7orf77A4D0Y5 90 aa9.48□□□□□ -0.89
UBE2D3-228ENST00000508974 CCL25O15444 150 aa9.48□□□□□ -0.89
UBE2D3-228ENST00000508974 RPL37AP61513 92 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-228ENST00000508974 MRPL54Q6P161 138 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-228ENST00000508974 CFAP161Q6P656 301 aa9.48□□□□□ -0.89
UBE2D3-228ENST00000508974 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
UBE2D3-228ENST00000508974 LINC00959A0A1B0GUT2 108 aa9.47□□□□□ -0.89
UBE2D3-228ENST00000508974 VCYO14598 125 aa9.47□□□□□ -0.89
UBE2D3-228ENST00000508974 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-228ENST00000508974 FOXI1Q12951 378 aa9.47□□□□□ -0.89
UBE2D3-228ENST00000508974 RNASE13Q5GAN3 156 aaKnown RBP9.47□□□□□ -0.89
UBE2D3-228ENST00000508974 FAM104BQ5XKR9 115 aa9.47□□□□□ -0.89
UBE2D3-228ENST00000508974 XP32Q5T750 250 aa9.46□□□□□ -0.9
UBE2D3-228ENST00000508974 ZNF664Q8N3J9 261 aa9.46□□□□□ -0.9
UBE2D3-228ENST00000508974 LINC00526Q96FQ7 95 aa9.46□□□□□ -0.9
UBE2D3-228ENST00000508974 SMDT1Q9H4I9 107 aa9.46□□□□□ -0.9
UBE2D3-228ENST00000508974 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.9
UBE2D3-228ENST00000508974 CKS2P33552 79 aa9.45□□□□□ -0.9
UBE2D3-228ENST00000508974 SS18Q15532 418 aa9.45□□□□□ -0.9
UBE2D3-228ENST00000508974 MRPL52Q86TS9 123 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-228ENST00000508974 KIR2DL4Q99706 377 aa9.45□□□□□ -0.9
UBE2D3-228ENST00000508974 PPP1R17O96001 155 aa9.44□□□□□ -0.9
UBE2D3-228ENST00000508974 COX6A2Q02221 97 aa9.44□□□□□ -0.9
UBE2D3-228ENST00000508974 GVQW2A0A096LPI5 108 aaPredicted RBP9.43□□□□□ -0.9
UBE2D3-228ENST00000508974 IGKV2-24A0A0C4DH68 120 aa9.43□□□□□ -0.9
UBE2D3-228ENST00000508974 A0A1B0GW15 77 aa9.43□□□□□ -0.9
UBE2D3-228ENST00000508974 D6R8Y8 96 aa9.43□□□□□ -0.9
UBE2D3-228ENST00000508974 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
UBE2D3-228ENST00000508974 HBBP68871 147 aa9.43□□□□□ -0.9
UBE2D3-228ENST00000508974 PRSS3P2Q8NHM4 247 aa9.43□□□□□ -0.9
UBE2D3-228ENST00000508974 UBE2D4Q9Y2X8 147 aa9.43□□□□□ -0.9
UBE2D3-228ENST00000508974 A0A087WYN8 130 aa9.42□□□□□ -0.9
UBE2D3-228ENST00000508974 TNFRSF6BO95407 300 aa9.42□□□□□ -0.9
UBE2D3-228ENST00000508974 HNRNPA3P51991 378 aaKnown RBP9.42□□□□□ -0.9
UBE2D3-228ENST00000508974 CIRBPQ14011 172 aaKnown RBP9.42□□□□□ -0.9
UBE2D3-228ENST00000508974 SPACA4Q8TDM5 124 aa9.42□□□□□ -0.9
UBE2D3-228ENST00000508974 A0A1B0GXF2 115 aa9.41□□□□□ -0.9
UBE2D3-228ENST00000508974 LINC00862A6NCI5 91 aa9.41□□□□□ -0.9
UBE2D3-228ENST00000508974 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-228ENST00000508974 F8W036 122 aa9.41□□□□□ -0.9
UBE2D3-228ENST00000508974 NPYP01303 97 aa9.41□□□□□ -0.9
UBE2D3-228ENST00000508974 Q6ZUT4 128 aa9.41□□□□□ -0.9
UBE2D3-228ENST00000508974 TRAV13-1A0A0B4J241 112 aa9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 IGHV1-58A0A0C4DH39 117 aa9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 S100A8P05109 93 aa9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 MAJINQ3KP22 176 aa9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 CD164L2Q6UWJ8 174 aa9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 C20orf78Q9BR46 151 aa9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 SMIM2Q9BVW6 85 aa9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-228ENST00000508974 PKHD1L1Q86WI1 4243 aa9.39□□□□□ -0.91
UBE2D3-228ENST00000508974 TCAPO15273 167 aa9.39□□□□□ -0.91
UBE2D3-228ENST00000508974 RAB14P61106 215 aa9.39□□□□□ -0.91
UBE2D3-228ENST00000508974 SMAGPQ0VAQ4 97 aa9.39□□□□□ -0.91
UBE2D3-228ENST00000508974 TRBV24-1A0A075B6N3 115 aa9.38□□□□□ -0.91
UBE2D3-228ENST00000508974 A0A096LNI7 61 aa9.38□□□□□ -0.91
UBE2D3-228ENST00000508974 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
UBE2D3-228ENST00000508974 MALP21145 153 aa9.38□□□□□ -0.91
UBE2D3-228ENST00000508974 TMEM18Q96B42 140 aa9.38□□□□□ -0.91
UBE2D3-228ENST00000508974 CARD19Q96LW7 228 aa9.38□□□□□ -0.91
UBE2D3-228ENST00000508974 MRPL18Q9H0U6 180 aaKnown RBP9.38□□□□□ -0.91
UBE2D3-228ENST00000508974 C1orf196B1AJZ1 125 aa9.37□□□□□ -0.91
UBE2D3-228ENST00000508974 COX7A2LO14548 114 aa9.37□□□□□ -0.91
UBE2D3-228ENST00000508974 OPRPNQ99935 248 aaPredicted RBP9.37□□□□□ -0.91
UBE2D3-228ENST00000508974 CSDC2Q9Y534 153 aaKnown RBP9.37□□□□□ -0.91
UBE2D3-228ENST00000508974 PHOX2AO14813 284 aa9.36□□□□□ -0.91
UBE2D3-228ENST00000508974 RPL32P62910 135 aaKnown RBP9.36□□□□□ -0.91
UBE2D3-228ENST00000508974 C5orf38Q86SI9 138 aa9.36□□□□□ -0.91
UBE2D3-228ENST00000508974 STPG4Q8N801 248 aa9.36□□□□□ -0.91
UBE2D3-228ENST00000508974 PRELID3AQ96N28 172 aa9.36□□□□□ -0.91
UBE2D3-228ENST00000508974 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
UBE2D3-228ENST00000508974 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
UBE2D3-228ENST00000508974 SYCNQ0VAF6 134 aa9.35□□□□□ -0.91
UBE2D3-228ENST00000508974 TMEM136Q6ZRR5 245 aa9.35□□□□□ -0.91
UBE2D3-228ENST00000508974 ATP5L2Q7Z4Y8 100 aa9.35□□□□□ -0.91
UBE2D3-228ENST00000508974 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
UBE2D3-228ENST00000508974 FAT3Q8TDW7 4589 aa9.35□□□□□ -0.91
UBE2D3-228ENST00000508974 TIMM21Q9BVV7 248 aa9.35□□□□□ -0.91
UBE2D3-228ENST00000508974 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
UBE2D3-228ENST00000508974 PPBPP02775 128 aa9.34□□□□□ -0.91
UBE2D3-228ENST00000508974 MT-ND4LP03901 98 aa9.34□□□□□ -0.91
UBE2D3-228ENST00000508974 PNRC1Q12796 327 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms