RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 LINC01560Q8TB33 94 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 TIMM17AQ99595 171 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 C11orf68Q9H3H3 251 aaKnown RBP5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 USP9XQ93008 2570 aaPredicted RBP5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 LRCOL1A6NCL2 159 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 E7EQL1 145 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 WIPF1O43516 503 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 GHRHP01286 108 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 SPINK13Q1W4C9 94 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 ENHOQ6UWT2 76 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 IL17DQ8TAD2 202 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 MRAPQ8TCY5 172 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 ITLN2Q8WWU7 325 aaPredicted RBP5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 PRORYQ9H606 182 aa5.31□□□□□ -1.56
LIMCH1-207ENST00000508466 APCP25054 2843 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 M0QY20 66 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 CXCL5P42830 114 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 SERP2Q8N6R1 65 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 LINC00308Q8TCZ7 52 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 TOMM7Q9P0U1 55 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 NF1P21359 2839 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 IGHV1-58A0A0C4DH39 117 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 C19orf84I3L1E1 186 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 RBM3P98179 157 aaKnown RBP5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 LY6DQ14210 128 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 PRIMA1Q86XR5 153 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 FAM104AQ969W3 186 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 UPK3BQ9BT76 320 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 BPESC1Q9GZL8 116 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 IGF2RP11717 2491 aa5.3□□□□□ -1.56
LIMCH1-207ENST00000508466 MALP21145 153 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 DEFB121Q5J5C9 76 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 Q6ZSN1 163 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 VSIG2Q96IQ7 327 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 CHD6Q8TD26 2715 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 LY6LH3BQJ8 138 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 COX7A2LO14548 114 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 IGHG3P01860 377 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 SPANXA1Q9NS26 97 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 IGHV1-69DA0A0B4J2H0 117 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 TRBV27A0A0K0K1C4 114 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 GRNP28799 593 aaKnown RBP5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 LY6G5BQ8NDX9 201 aa5.29□□□□□ -1.56
LIMCH1-207ENST00000508466 UTP20O75691 2785 aaKnown RBP5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 LECT2O14960 151 aa5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 LY6EQ16553 131 aa5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 TMEM30BQ3MIR4 351 aa5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 Q6ZTI0 123 aa5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 RMI2Q96E14 147 aa5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 SEC61GP60059 68 aa5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 TMEM258P61165 79 aa5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 DGAT2L7PQ6IED9 249 aa5.28□□□□□ -1.56
LIMCH1-207ENST00000508466 PPP1R17O96001 155 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 ACYP1P07311 99 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 PRR3P79522 188 aaKnown RBP5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 LINC00467Q9BRT7 94 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 TEX15Q9BXT5 2789 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 SCXQ7RTU7 201 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 LINC00482Q8N8I6 264 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 MUC6Q6W4X9 2439 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 NCOR2Q9Y618 2525 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 ZNF415Q09FC8 603 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 Q8N9W7 124 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 TMEM190Q8WZ59 177 aa5.27□□□□□ -1.57
LIMCH1-207ENST00000508466 EPG5Q9HCE0 2579 aa5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 IGHV4OR15-8A0A075B7B6 117 aa5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 A0A087WW49 117 aa5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 RPL36AP83881 106 aaKnown RBP5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 RPL36ALQ969Q0 106 aaKnown RBP5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 UCNP55089 124 aa5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 CFHR3Q02985 330 aa5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 BEAN1Q3B7T3 259 aa5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 RHPN1-AS1Q9BWJ2 59 aa5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 PIEZO1Q92508 2521 aa5.26□□□□□ -1.57
LIMCH1-207ENST00000508466 IGHV3-53P01767 116 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 ZFP36P26651 326 aaKnown RBP5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 BRD3OSQ6XYD6 125 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 LINC00337Q8N6G1 96 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 CR1P17927 2039 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 NAV2Q8IVL1 2488 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 CHD8Q9HCK8 2581 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 IGHV3OR16-12A0A075B7B8 117 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 RBMY1BA6NDE4 496 aaKnown RBP5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 RBMY1EA6NEQ0 496 aaKnown RBP5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 RBMY1DP0C7P1 496 aaKnown RBP5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 RBMY1A1P0DJD3 496 aaKnown RBP5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 RBMY1CP0DJD4 496 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 RBMY1FQ15415 496 aaKnown RBP5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 NPBQ8NG41 125 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 F8P00451 2351 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 CFAP46Q8IYW2 2715 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 PKD1L2Q7Z442 2459 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 XCL1P47992 114 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 MIR7-3HGQ8N6C7 128 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 SPANXDQ9BXN6 97 aa5.25□□□□□ -1.57
LIMCH1-207ENST00000508466 SPANXCQ9NY87 97 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms