RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	GATD1	Q8NB37	220 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238	C20orf203	Q8NBC4	194 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238	TMEM243	Q9BU79	118 aa		5.16	□□□□□ -1.58
UBE2D3-222	ENST00000508238		A0A1B0GW15	77 aa		5.15	□□□□□ -1.59
UBE2D3-222	ENST00000508238	TCAP	O15273	167 aa		5.15	□□□□□ -1.59
UBE2D3-222	ENST00000508238	PRSS1	P07477	247 aa		5.15	□□□□□ -1.59
UBE2D3-222	ENST00000508238	CFAP161	Q6P656	301 aa		5.15	□□□□□ -1.59
UBE2D3-222	ENST00000508238	LINC01551	Q86U37	167 aa		5.15	□□□□□ -1.59
UBE2D3-222	ENST00000508238	BTF3L4	Q96K17	158 aa		5.15	□□□□□ -1.59
UBE2D3-222	ENST00000508238	NAT8B	Q9UHF3	227 aa		5.15	□□□□□ -1.59
UBE2D3-222	ENST00000508238	LINC00862	A6NCI5	91 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	HIGD1C	A8MV81	97 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238		I3L3M4	83 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	SRP19	P09132	144 aa	Known RBP	5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	PMCH	P20382	165 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	AMT	P48728	403 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	AMMECR1L	Q6DCA0	310 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	C9orf163	Q8N9P6	203 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	CIRBP-AS1	Q8TBR5	109 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	MRAP2	Q96G30	205 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	TMEM101	Q96IK0	257 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	TMEM191A	Q9H0A3	160 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	ST20	Q9HBF5	79 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	NAT8	Q9UHE5	227 aa		5.14	□□□□□ -1.59
UBE2D3-222	ENST00000508238	IGLV4-60	A0A075B6I1	120 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	TRAV26-2	A0A0B4J265	109 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	TRBV6-5	A0A0K0K1A5	114 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238		F8W036	122 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	VCY	O14598	125 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	PPP1R2P9	O14990	202 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	HLA-DQA1	P01909	254 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	ZNF25	P17030	456 aa	Predicted RBP	5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	CNBP	P62633	177 aa	Known RBP	5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	SDIM1	Q6ZPB5	146 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	TMEM18	Q96B42	140 aa		5.13	□□□□□ -1.59
UBE2D3-222	ENST00000508238	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	PRY	O14603	147 aa		5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	CCL25	O15444	150 aa		5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	APCS	P02743	223 aa		5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	KRTAP10-4	P60372	401 aa	Predicted RBP	5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	CLPSL2	Q6UWE3	100 aa		5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	DEFB104A	Q8WTQ1	72 aa		5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	RPL39L	Q96EH5	51 aa	Known RBP	5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	KIR2DL4	Q99706	377 aa		5.12	□□□□□ -1.59
UBE2D3-222	ENST00000508238	IGLV10-54	A0A075B6I4	117 aa		5.11	□□□□□ -1.59
UBE2D3-222	ENST00000508238	SDHAF1	A6NFY7	115 aa		5.11	□□□□□ -1.59
UBE2D3-222	ENST00000508238	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.11	□□□□□ -1.59
UBE2D3-222	ENST00000508238	PNRC1	Q12796	327 aa	Predicted RBP	5.11	□□□□□ -1.59
UBE2D3-222	ENST00000508238	CIRBP	Q14011	172 aa	Known RBP	5.11	□□□□□ -1.59
UBE2D3-222	ENST00000508238	ADIRF	Q15847	76 aa		5.11	□□□□□ -1.59
UBE2D3-222	ENST00000508238	ISOC2	Q96AB3	205 aa		5.11	□□□□□ -1.59
UBE2D3-222	ENST00000508238	PKIG	Q9Y2B9	76 aa		5.11	□□□□□ -1.59
UBE2D3-222	ENST00000508238	TRBV27	A0A0K0K1C4	114 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238		A0A1B0GVG6	124 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	SMIM27	A0A1W2PRY6	76 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	PPBP	P02775	128 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	ESD	P10768	282 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	RAB4A	P20338	218 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	FCER1G	P30273	86 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	POLR2K	P53803	58 aa	Known RBP	5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	RPL23	P62829	140 aa	Known RBP	5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	RNASEK	Q6P5S7	137 aa	Known RBP	5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	NUP35	Q8NFH5	326 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	C20orf78	Q9BR46	151 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238		V9GYV3	84 aa		5.1	□□□□□ -1.59
UBE2D3-222	ENST00000508238	hDV102S1	A0JD36	115 aa		5.09	□□□□□ -1.59
UBE2D3-222	ENST00000508238	GAS8-AS1	O95177	125 aa		5.09	□□□□□ -1.59
UBE2D3-222	ENST00000508238	MT-ND4L	P03901	98 aa		5.09	□□□□□ -1.59
UBE2D3-222	ENST00000508238	FGF6	P10767	208 aa		5.09	□□□□□ -1.59
UBE2D3-222	ENST00000508238	CKS2	P33552	79 aa		5.09	□□□□□ -1.59
UBE2D3-222	ENST00000508238	SS18	Q15532	418 aa		5.09	□□□□□ -1.59
UBE2D3-222	ENST00000508238	DPH3	Q96FX2	82 aa		5.09	□□□□□ -1.59
UBE2D3-222	ENST00000508238	RNF185	Q96GF1	192 aa		5.09	□□□□□ -1.59
UBE2D3-222	ENST00000508238	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	TSHB	P01222	138 aa		5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	G0S2	P27469	103 aa		5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	FAM104B	Q5XKR9	115 aa		5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	ATP5L2	Q7Z4Y8	100 aa		5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	MRPL52	Q86TS9	123 aa	Known RBP	5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	C15orf56	Q8N910	161 aa		5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	OR5A1	Q8NGJ0	315 aa		5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	CSDC2	Q9Y534	153 aa	Known RBP	5.08	□□□□□ -1.6
UBE2D3-222	ENST00000508238	TRBV24-1	A0A075B6N3	115 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	IGHV3-64	A0A075B6Q5	118 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	C7orf77	A4D0Y5	90 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238		C9JQL5	133 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	PANO1	I0J062	215 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	PHOX2A	O14813	284 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	RAB5A	P20339	215 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	RPS10	P46783	165 aa	Known RBP	5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	CAMP	P49913	170 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	RPL32	P62910	135 aa	Known RBP	5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	HBB	P68871	147 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	AMN1	Q8IY45	258 aa		5.07	□□□□□ -1.6
UBE2D3-222	ENST00000508238	LRP1	Q07954	4544 aa	Known RBP	5.06	□□□□□ -1.6
UBE2D3-222	ENST00000508238	C1orf196	B1AJZ1	125 aa		5.06	□□□□□ -1.6
UBE2D3-222	ENST00000508238	OXT	P01178	125 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms