RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 PHF5AQ7RTV0 110 aaKnown RBP3.52□□□□□ -1.85
GYPB-208ENST00000507009 ZNF664Q8N3J9 261 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 KCNRGQ8N5I3 272 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 RPL39LQ96EH5 51 aaKnown RBP3.52□□□□□ -1.85
GYPB-208ENST00000507009 TMEM101Q96IK0 257 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 BTF3L4Q96K17 158 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 PGLYRP4Q96LB8 373 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 TCEAL7Q9BRU2 100 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 MLST8Q9BVC4 326 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 IGLV4-69A0A075B6H9 119 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 LINC00959A0A1B0GUT2 108 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 IFNA1P01562 189 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 IGLC6P0CF74 106 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 PMCHP20382 165 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 NTF3P20783 257 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 RPL35P42766 123 aaKnown RBP3.51□□□□□ -1.85
GYPB-208ENST00000507009 CAMPP49913 170 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 RPS20P60866 119 aaKnown RBP3.51□□□□□ -1.85
GYPB-208ENST00000507009 EIF5AP63241 154 aaKnown RBP3.51□□□□□ -1.85
GYPB-208ENST00000507009 TWIST1Q15672 202 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 C9orf116Q5BN46 136 aaPredicted RBP3.51□□□□□ -1.85
GYPB-208ENST00000507009 CENPWQ5EE01 88 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 GATD1Q8NB37 220 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 OR5A1Q8NGJ0 315 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 MUC2Q02817 5179 aa3.51□□□□□ -1.85
GYPB-208ENST00000507009 A0A087WZ39 114 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 XKRY2A2RUG3 117 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 RAB19A4D1S5 217 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 ARPC5O15511 151 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 TSPAN13O95857 204 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 GIPP09681 153 aaPredicted RBP3.5□□□□□ -1.85
GYPB-208ENST00000507009 UBE2D1P51668 147 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 SS18Q15532 418 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 ISOC2Q96AB3 205 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 CAMK2N2Q96S95 79 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 OPRPNQ99935 248 aaPredicted RBP3.5□□□□□ -1.85
GYPB-208ENST00000507009 GNG13Q9P2W3 67 aa3.5□□□□□ -1.85
GYPB-208ENST00000507009 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
GYPB-208ENST00000507009 F2Z2F3 143 aa3.49□□□□□ -1.85
GYPB-208ENST00000507009 IGLV7-43P04211 117 aa3.49□□□□□ -1.85
GYPB-208ENST00000507009 GNG4P50150 75 aa3.49□□□□□ -1.85
GYPB-208ENST00000507009 FOXA3P55318 350 aaPredicted RBP3.49□□□□□ -1.85
GYPB-208ENST00000507009 RNASE13Q5GAN3 156 aaKnown RBP3.49□□□□□ -1.85
GYPB-208ENST00000507009 LINC00299Q6ZSB3 139 aa3.49□□□□□ -1.85
GYPB-208ENST00000507009 CYTL1Q9NRR1 136 aa3.49□□□□□ -1.85
GYPB-208ENST00000507009 TMEM242Q9NWH2 141 aa3.49□□□□□ -1.85
GYPB-208ENST00000507009 C19orf71A6NCJ1 209 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 SDHAF1A6NFY7 115 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 H0Y9J4 135 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 SMLR1H3BR10 107 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 COX7A2LO14548 114 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 APOMO95445 188 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 NCR2O95944 276 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 ZNF25P17030 456 aaPredicted RBP3.48□□□□□ -1.85
GYPB-208ENST00000507009 CCL20P78556 96 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 EIF5AL1Q6IS14 154 aaKnown RBP3.48□□□□□ -1.85
GYPB-208ENST00000507009 SMIM15Q7Z3B0 74 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 FAM19A5Q7Z5A7 132 aaPredicted RBP3.48□□□□□ -1.85
GYPB-208ENST00000507009 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 NUP35Q8NFH5 326 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 MBD3L1Q8WWY6 194 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 MRAP2Q96G30 205 aa3.48□□□□□ -1.85
GYPB-208ENST00000507009 TRAV13-1A0A0B4J241 112 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 TRAV1-1A0A0B4J248 108 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.47□□□□□ -1.85
GYPB-208ENST00000507009 H7C423 109 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 I3L3M4 83 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 BCL2L11O43521 198 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 UBE2BP63146 152 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 MEF2BQ02080 365 aaPredicted RBP3.47□□□□□ -1.85
GYPB-208ENST00000507009 SPAG11BQ08648 103 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 CD164L2Q6UWJ8 174 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 KRTAP11-1Q8IUC1 163 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 RNASE7Q9H1E1 156 aaKnown RBP3.47□□□□□ -1.85
GYPB-208ENST00000507009 MED9Q9NWA0 146 aa3.47□□□□□ -1.85
GYPB-208ENST00000507009 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 UMAD1C9J7I0 102 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 TSHBP01222 138 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 CTRLP40313 264 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 GAGE2EQ4V326 116 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 C9orf62Q8N4C0 152 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 C11orf52Q96A22 123 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 RPP21Q9H633 154 aaKnown RBP3.46□□□□□ -1.86
GYPB-208ENST00000507009 ST20Q9HBF5 79 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 MANBALQ9NQG1 85 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 CDC42SE2Q9NRR3 84 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 GAGE2DQ9UEU5 116 aa3.46□□□□□ -1.86
GYPB-208ENST00000507009 TRBV20OR9-2A0A075B6H5 130 aa3.45□□□□□ -1.86
GYPB-208ENST00000507009 C7orf77A4D0Y5 90 aa3.45□□□□□ -1.86
GYPB-208ENST00000507009 C1orf196B1AJZ1 125 aa3.45□□□□□ -1.86
GYPB-208ENST00000507009 G3V3Q6 166 aa3.45□□□□□ -1.86
GYPB-208ENST00000507009 FCER1GP30273 86 aa3.45□□□□□ -1.86
GYPB-208ENST00000507009 ORAOV1Q8WV07 137 aa3.45□□□□□ -1.86
GYPB-208ENST00000507009 BIN3Q9NQY0 253 aa3.45□□□□□ -1.86
GYPB-208ENST00000507009 KANTRA0A1W2PQU2 76 aa3.44□□□□□ -1.86
GYPB-208ENST00000507009 SMKR1H3BMG3 65 aa3.44□□□□□ -1.86
GYPB-208ENST00000507009 M0QXV9 152 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms