RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 CCL16O15467 120 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SNCGO76070 127 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CST7O76096 145 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 NCR2O95944 276 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 APOA2P02652 100 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 APOC2P02655 101 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 FREM3P0C091 2139 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SFTA3P0C7M3 94 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 C3orf79P0CE67 100 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CKS2P33552 79 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 POLR2JP52435 117 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ROMO1P60602 79 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CNBPP62633 177 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 EIF5AP63241 154 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CCL20P78556 96 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 RHOHQ15669 191 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ASB16-AS1Q495Z4 193 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 LELP1Q5T871 98 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CFAP126Q5VTH2 177 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 NCBP2-AS2Q69YL0 99 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 EIF5AL1Q6IS14 154 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 C5orf38Q86SI9 138 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SBSPONQ8IVN8 264 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 DEFB107AQ8IZN7 70 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 OR5AS1Q8N127 324 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 C20orf197Q8N268 126 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 Q8N6K4 173 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SIGLECL1Q8N7X8 197 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 TMEM70Q9BUB7 260 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 DPY30Q9C005 99 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 FXYD6Q9H0Q3 95 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ST20Q9HBF5 79 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CCDC167Q9P0B6 97 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 UQCR10Q9UDW1 63 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CACFD1Q9UGQ2 172 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 IER3IP1Q9Y5U9 82 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ARL2-SNX15V9GYD0 113 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 MED13LQ71F56 2210 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ABCA4P78363 2273 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SMG6Q86US8 1419 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 NSD3Q9BZ95 1437 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CCDC88BA6NC98 1476 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ATP10BO94823 1461 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 POLA1P09884 1462 aaPredicted RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 IQSEC2Q5JU85 1478 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 NEO1Q92859 1461 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CUX1P39880 1505 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 HMGXB3Q12766 1538 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ZMYM4Q5VZL5 1548 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 DUOX2Q9NRD8 1548 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SPTBN4Q9H254 2564 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CHD8Q9HCK8 2581 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 NRKQ7Z2Y5 1582 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 DIP2CQ9Y2E4 1556 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 TMEM131LA2VDJ0 1609 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SHROOM2Q13796 1616 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ZCCHC11Q5TAX3 1644 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 MYO3AQ8NEV4 1616 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 PHRF1Q9P1Y6 1649 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ZNF142P52746 1687 aaPredicted RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 POLR1AO95602 1720 aaPredicted RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 DOT1LQ8TEK3 1739 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CRYBG1Q9Y4K1 1723 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SCN11AQ9UI33 1791 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 AFDNP55196 1824 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ABCA1O95477 2261 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 TRANK1O15050 2925 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 ASH1LQ9NR48 2969 aaKnown RBP0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 TRAV23DV6A0A075B6W5 121 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 A0A087WXM4 84 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 IGLV3-32A0A0A0MS00 114 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 TRAV12-3A0A0B4J271 114 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 UBE2L5PA0A1B0GUS4 154 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 hDV103S1A0JD37 113 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 TMEM30CPA0ZSE6 113 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 CRYM-AS1A6NIL9 109 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 H7BZZ5 65 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 M0R2P5 195 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 FXYD1O00168 92 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 UQCRQO14949 82 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 LYRM1O43325 122 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 SPINK4O60575 86 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 GYPBP06028 91 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 DBIP07108 87 aaKnown RBP0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 IFI6P09912 130 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 SMIM13P0DJ93 91 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 CCL4P13236 92 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 S100A4P26447 101 aaKnown RBP0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 FCER1GP30273 86 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 ADIRFQ15847 76 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 ESRGQ1W209 222 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 DEFB112Q30KQ8 113 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 C10orf128Q5T292 105 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 ZNF818PQ6ZRF7 136 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 ZNF826PQ6ZT77 177 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 MIR17HGQ75NE6 70 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 PHF5AQ7RTV0 110 aaKnown RBP0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 NUP35Q8NFH5 326 aa0.26□□□□□ -2.37
CDC42SE2-210ENST00000506929 CCL4L1Q8NHW4 92 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms