RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 Q6ZTC4 211 aa8.4□□□□□ -1.06
POLR2J3-211ENST00000506060 ZNF664Q8N3J9 261 aa8.4□□□□□ -1.06
POLR2J3-211ENST00000506060 NANOS2P60321 138 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-211ENST00000506060 SEC11AP67812 179 aa8.39□□□□□ -1.07
POLR2J3-211ENST00000506060 CMYA5Q8N3K9 4069 aa8.38□□□□□ -1.07
POLR2J3-211ENST00000506060 TIRAPP58753 221 aa8.38□□□□□ -1.07
POLR2J3-211ENST00000506060 HERVK_113P61574 105 aa8.38□□□□□ -1.07
POLR2J3-211ENST00000506060 AMELXQ99217 191 aa8.38□□□□□ -1.07
POLR2J3-211ENST00000506060 hDV102S1A0JD36 115 aa8.37□□□□□ -1.07
POLR2J3-211ENST00000506060 PCP4L1A6NKN8 68 aa8.37□□□□□ -1.07
POLR2J3-211ENST00000506060 LELP1Q5T871 98 aa8.37□□□□□ -1.07
POLR2J3-211ENST00000506060 C15orf53Q8NAA6 179 aa8.37□□□□□ -1.07
POLR2J3-211ENST00000506060 PRO1933Q9H354 126 aa8.37□□□□□ -1.07
POLR2J3-211ENST00000506060 A0A096LPF7 62 aa8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 TMEM262E9PQX1 116 aa8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 GAGE6Q13070 117 aa8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 ZC2HC1BQ5TFG8 222 aa8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 CEMP1Q6PRD7 247 aaPredicted RBP8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 Q6ZUT4 128 aa8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 NFE4Q86UQ8 179 aa8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 OPRPNQ99935 248 aaPredicted RBP8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 UQCR10Q9UDW1 63 aa8.36□□□□□ -1.07
POLR2J3-211ENST00000506060 TRAV8-6A0A0B4J262 113 aa8.35□□□□□ -1.07
POLR2J3-211ENST00000506060 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
POLR2J3-211ENST00000506060 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
POLR2J3-211ENST00000506060 MIEN1Q9BRT3 115 aa8.35□□□□□ -1.07
POLR2J3-211ENST00000506060 CHAC1Q9BUX1 264 aa8.35□□□□□ -1.07
POLR2J3-211ENST00000506060 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-211ENST00000506060 CDC42SE2Q9NRR3 84 aa8.35□□□□□ -1.07
POLR2J3-211ENST00000506060 DNAH3Q8TD57 4116 aa8.35□□□□□ -1.07
POLR2J3-211ENST00000506060 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
POLR2J3-211ENST00000506060 TINCRA0A1B0GVN0 87 aa8.34□□□□□ -1.07
POLR2J3-211ENST00000506060 C11orf86A6NJI1 115 aa8.34□□□□□ -1.07
POLR2J3-211ENST00000506060 MAJINQ3KP22 176 aa8.34□□□□□ -1.07
POLR2J3-211ENST00000506060 SLC25A34Q6PIV7 304 aa8.34□□□□□ -1.07
POLR2J3-211ENST00000506060 H3BRM9 83 aa8.33□□□□□ -1.08
POLR2J3-211ENST00000506060 DDTP30046 118 aa8.33□□□□□ -1.08
POLR2J3-211ENST00000506060 DEFA6Q01524 100 aa8.33□□□□□ -1.08
POLR2J3-211ENST00000506060 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
POLR2J3-211ENST00000506060 STPG4Q8N801 248 aa8.33□□□□□ -1.08
POLR2J3-211ENST00000506060 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 CCL25O15444 150 aa8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 COX8AP10176 69 aa8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 UBE2D1P51668 147 aa8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 HERVK_113P63121 156 aa8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 RNASE13Q5GAN3 156 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 LYPD5Q6UWN5 251 aa8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 FAM104AQ969W3 186 aa8.32□□□□□ -1.08
POLR2J3-211ENST00000506060 NMUP48645 174 aa8.31□□□□□ -1.08
POLR2J3-211ENST00000506060 RBX1P62877 108 aa8.31□□□□□ -1.08
POLR2J3-211ENST00000506060 ANKRD39Q53RE8 183 aa8.31□□□□□ -1.08
POLR2J3-211ENST00000506060 FAM19A3Q7Z5A8 133 aa8.31□□□□□ -1.08
POLR2J3-211ENST00000506060 C14orf144Q96I85 54 aa8.31□□□□□ -1.08
POLR2J3-211ENST00000506060 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
POLR2J3-211ENST00000506060 E9PLD3 99 aa8.3□□□□□ -1.08
POLR2J3-211ENST00000506060 DLEU1O43261 78 aa8.3□□□□□ -1.08
POLR2J3-211ENST00000506060 HNRNPA3P51991 378 aaKnown RBP8.3□□□□□ -1.08
POLR2J3-211ENST00000506060 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
POLR2J3-211ENST00000506060 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-211ENST00000506060 SS18Q15532 418 aa8.29□□□□□ -1.08
POLR2J3-211ENST00000506060 PLEKHB2Q96CS7 222 aa8.29□□□□□ -1.08
POLR2J3-211ENST00000506060 IGLV4-60A0A075B6I1 120 aa8.28□□□□□ -1.08
POLR2J3-211ENST00000506060 ANGP03950 147 aaKnown RBP8.28□□□□□ -1.08
POLR2J3-211ENST00000506060 MPV17L2Q567V2 206 aa8.28□□□□□ -1.08
POLR2J3-211ENST00000506060 IGLV5-45A0A087WSX0 123 aa8.27□□□□□ -1.09
POLR2J3-211ENST00000506060 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
POLR2J3-211ENST00000506060 LEPROTO15243 131 aa8.27□□□□□ -1.09
POLR2J3-211ENST00000506060 SIVA1O15304 175 aa8.27□□□□□ -1.09
POLR2J3-211ENST00000506060 LGALS3P17931 250 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-211ENST00000506060 CCL18P55774 89 aa8.27□□□□□ -1.09
POLR2J3-211ENST00000506060 LINC00242Q5T6M2 205 aa8.27□□□□□ -1.09
POLR2J3-211ENST00000506060 BOD1L2Q8IYS8 172 aa8.27□□□□□ -1.09
POLR2J3-211ENST00000506060 IGLL5B9A064 214 aa8.26□□□□□ -1.09
POLR2J3-211ENST00000506060 TCTAP57738 103 aa8.26□□□□□ -1.09
POLR2J3-211ENST00000506060 KLK5Q9Y337 293 aaPredicted RBP8.26□□□□□ -1.09
POLR2J3-211ENST00000506060 MRPS16Q9Y3D3 137 aaKnown RBP8.26□□□□□ -1.09
POLR2J3-211ENST00000506060 IGKV3OR2-268A0A0C4DH90 116 aa8.25□□□□□ -1.09
POLR2J3-211ENST00000506060 LINC00959A0A1B0GUT2 108 aa8.25□□□□□ -1.09
POLR2J3-211ENST00000506060 NUPR2A6NF83 97 aa8.25□□□□□ -1.09
POLR2J3-211ENST00000506060 ESRGQ1W209 222 aa8.25□□□□□ -1.09
POLR2J3-211ENST00000506060 IGKV2D-26A0A0A0MRZ7 120 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 MYMXA0A1B0GTQ4 84 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 J3QQQ9 107 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 CRPP02741 224 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 REG3AQ06141 175 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 PCP2Q8IVA1 136 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 CDKN2A-AS1Q9UH64 79 aa8.24□□□□□ -1.09
POLR2J3-211ENST00000506060 ZNF815PA8K554 130 aa8.23□□□□□ -1.09
POLR2J3-211ENST00000506060 LINC00587B1AMM8 73 aa8.23□□□□□ -1.09
POLR2J3-211ENST00000506060 HIGD1BQ9P298 99 aa8.23□□□□□ -1.09
POLR2J3-211ENST00000506060 TRAV8-4A0A0B4J246 113 aa8.22□□□□□ -1.09
POLR2J3-211ENST00000506060 SPINK8P0C7L1 97 aa8.22□□□□□ -1.09
POLR2J3-211ENST00000506060 IGHV3-30-3P0DP02 117 aa8.22□□□□□ -1.09
POLR2J3-211ENST00000506060 CTAG1AP78358 180 aa8.22□□□□□ -1.09
POLR2J3-211ENST00000506060 COX6A2Q02221 97 aa8.22□□□□□ -1.09
POLR2J3-211ENST00000506060 LINC01556Q5JQF7 62 aa8.22□□□□□ -1.09
POLR2J3-211ENST00000506060 SCGB1D4Q6XE38 83 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms