RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), human

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-205	ENST00000505583	GATD1	Q8NB37	220 aa		3.63	□□□□□ -1.83
GYPB-205	ENST00000505583	C7orf33	Q8WU49	177 aa		3.63	□□□□□ -1.83
GYPB-205	ENST00000505583	RPL39L	Q96EH5	51 aa	Known RBP	3.63	□□□□□ -1.83
GYPB-205	ENST00000505583	DPH3P1	Q9H4G8	78 aa		3.63	□□□□□ -1.83
GYPB-205	ENST00000505583	GNG13	Q9P2W3	67 aa		3.63	□□□□□ -1.83
GYPB-205	ENST00000505583	FAM231B	A6NCW3	169 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583		F2Z2F3	143 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	UBE2L6	O14933	153 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	BCL2L11	O43521	198 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	GAS8-AS1	O95177	125 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	IFNA1	P01562	189 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	VPREB1	P12018	145 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	CTRL	P40313	264 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	GNG4	P50150	75 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	RPS20	P60866	119 aa	Known RBP	3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	C9orf62	Q8N4C0	152 aa		3.62	□□□□□ -1.83
GYPB-205	ENST00000505583	TRAV1-1	A0A0B4J248	108 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	HMSD	A8MTL9	139 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	TRGC1	P0CF51	173 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	FGF6	P10767	208 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	XCL1	P47992	114 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	TWIST1	Q15672	202 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	RNASEK	Q6P5S7	137 aa	Known RBP	3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	SPINK6	Q6UWN8	80 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	CNFN	Q9BYD5	112 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	RNASE7	Q9H1E1	156 aa	Known RBP	3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	MANBAL	Q9NQG1	85 aa		3.61	□□□□□ -1.83
GYPB-205	ENST00000505583	LINC00959	A0A1B0GUT2	108 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583		A0A1W2PNN7	141 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583	KANTR	A0A1W2PQU2	76 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583	KRTAP9-7	A8MTY7	169 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583		K7EN84	100 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583	CCL25	O15444	150 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583	MEF2B	Q02080	365 aa	Predicted RBP	3.6	□□□□□ -1.83
GYPB-205	ENST00000505583	AMMECR1L	Q6DCA0	310 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583	KRTAP3-1	Q9BYR8	98 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583	MED9	Q9NWA0	146 aa		3.6	□□□□□ -1.83
GYPB-205	ENST00000505583	XKRY2	A2RUG3	117 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	SDHAF1	A6NFY7	115 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	NCR2	O95944	276 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	TSHB	P01222	138 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	APCS	P02743	223 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	ESD	P10768	282 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	RGS21	Q2M5E4	152 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	REG3G	Q6UW15	175 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583		Q6ZRP5	223 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	OR5A1	Q8NGJ0	315 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	OCC1	Q8TAD7	63 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	SMIM12	Q96EX1	92 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	CARD19	Q96LW7	228 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	KRTAP4-11	Q9BYQ6	195 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	RPP21	Q9H633	154 aa	Known RBP	3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	BATF3	Q9NR55	127 aa		3.59	□□□□□ -1.83
GYPB-205	ENST00000505583	IGHV1-58	A0A0C4DH39	117 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583		H7C423	109 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583		I3L3M4	83 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	VCY	O14598	125 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	PDE6D	O43924	150 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	BCL2	P10415	239 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	SYCN	Q0VAF6	134 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	GAGE2B	Q13066	116 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	CDC42SE2	Q9NRR3	84 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	TMEM242	Q9NWH2	141 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	PAM16	Q9Y3D7	125 aa		3.58	□□□□□ -1.84
GYPB-205	ENST00000505583	IGLV4-69	A0A075B6H9	119 aa		3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	TRBV6-5	A0A0K0K1A5	114 aa		3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	ZNF25	P17030	456 aa	Predicted RBP	3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	PMCH	P20382	165 aa		3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	RNASE13	Q5GAN3	156 aa	Known RBP	3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	CD164L2	Q6UWJ8	174 aa		3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	KRTAP11-1	Q8IUC1	163 aa		3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	TMEM18	Q96B42	140 aa		3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	LINC00474	Q9P2X8	69 aa		3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	PSORS1C2	Q9UIG4	136 aa		3.57	□□□□□ -1.84
GYPB-205	ENST00000505583	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	POLR2K	P53803	58 aa	Known RBP	3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	EIF5A	P63241	154 aa	Known RBP	3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	SS18	Q15532	418 aa		3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	C9orf116	Q5BN46	136 aa	Predicted RBP	3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	PHF5A	Q7RTV0	110 aa	Known RBP	3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	MRPL52	Q86TS9	123 aa	Known RBP	3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	ZNF664	Q8N3J9	261 aa		3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	PRR26	Q8N8Z3	221 aa		3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	NUP35	Q8NFH5	326 aa		3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	MRAP2	Q96G30	205 aa		3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	BTF3L4	Q96K17	158 aa		3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	OPRPN	Q99935	248 aa	Predicted RBP	3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	BIN3	Q9NQY0	253 aa		3.56	□□□□□ -1.84
GYPB-205	ENST00000505583	LOC107984640	A0A0U1RRK4	108 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	FAM168B	A1KXE4	195 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	SMKR1	H3BMG3	65 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	TEX46	H3BTG2	121 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	GATC	O43716	136 aa	Known RBP	3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	RAB4A	P20338	218 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	TEX261	Q6UWH6	196 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	C5orf38	Q86SI9	138 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	AMN1	Q8IY45	258 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	FAM104A	Q969W3	186 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	TMEM101	Q96IK0	257 aa		3.55	□□□□□ -1.84
GYPB-205	ENST00000505583	ST20	Q9HBF5	79 aa		3.55	□□□□□ -1.84

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