RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 HIST1H2BDP58876 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST1H2BCP62807 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST2H2BEQ16778 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 LINC00336Q6ZUF6 198 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 C6orf223Q8N319 242 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST1H2BHQ93079 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST1H2BNQ99877 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 HIST1H2BMQ99879 126 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 IGLV4-3A0A075B6K6 122 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 KIR2DL4Q99706 377 aa5.49□□□□□ -1.53
CDC42SE2-208ENST00000505065 TRAV8-4A0A0B4J246 113 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 KIAA1644Q3SXP7 199 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 NFE4Q86UQ8 179 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 ZNF664Q8N3J9 261 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 MIAQ16674 131 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 LINC00614P0C842 121 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 FOXI1Q12951 378 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 ODF1Q14990 250 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 TMEM141Q96I45 108 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 LY6G6CO95867 125 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 G0S2P27469 103 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 SSTP61278 116 aa5.48□□□□□ -1.53
CDC42SE2-208ENST00000505065 EPM2AB3EWF7 344 aa5.47□□□□□ -1.53
CDC42SE2-208ENST00000505065 HSPG2P98160 4391 aa5.47□□□□□ -1.53
CDC42SE2-208ENST00000505065 TRAV9-2A0A087WT02 112 aa5.47□□□□□ -1.53
CDC42SE2-208ENST00000505065 TRAV8-3A0A0A6YYJ7 113 aa5.47□□□□□ -1.53
CDC42SE2-208ENST00000505065 UBE2D1P51668 147 aa5.47□□□□□ -1.53
CDC42SE2-208ENST00000505065 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.46□□□□□ -1.53
CDC42SE2-208ENST00000505065 IGKV2-29A2NJV5 120 aaPredicted RBP5.46□□□□□ -1.53
CDC42SE2-208ENST00000505065 RPL39P62891 51 aaKnown RBP5.46□□□□□ -1.53
CDC42SE2-208ENST00000505065 SMAGPQ0VAQ4 97 aa5.46□□□□□ -1.53
CDC42SE2-208ENST00000505065 ERASQ7Z444 233 aa5.46□□□□□ -1.53
CDC42SE2-208ENST00000505065 NUPR1O60356 82 aa5.46□□□□□ -1.54
CDC42SE2-208ENST00000505065 RAB5BP61020 215 aa5.46□□□□□ -1.54
CDC42SE2-208ENST00000505065 TRAV12-1A0A0B4J245 112 aa5.46□□□□□ -1.54
CDC42SE2-208ENST00000505065 LINC00959A0A1B0GUT2 108 aa5.46□□□□□ -1.54
CDC42SE2-208ENST00000505065 C2orf66Q6UXQ4 117 aa5.46□□□□□ -1.54
CDC42SE2-208ENST00000505065 TMEM18Q96B42 140 aa5.46□□□□□ -1.54
CDC42SE2-208ENST00000505065 Q6ZUT4 128 aa5.45□□□□□ -1.54
CDC42SE2-208ENST00000505065 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
CDC42SE2-208ENST00000505065 COX11Q9Y6N1 276 aa5.45□□□□□ -1.54
CDC42SE2-208ENST00000505065 SPATA12Q7Z6I5 190 aa5.45□□□□□ -1.54
CDC42SE2-208ENST00000505065 REG3AQ06141 175 aa5.45□□□□□ -1.54
CDC42SE2-208ENST00000505065 Q8N976 141 aa5.45□□□□□ -1.54
CDC42SE2-208ENST00000505065 IGHV3OR16-9A0A0B4J2B5 98 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 IGLC3P0DOY3 106 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 GAGE6Q13070 117 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 C1orf134Q5TEV5 83 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 NTN5Q8WTR8 489 aaPredicted RBP5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 CYSLTR1Q9Y271 337 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 IGLV4-69A0A075B6H9 119 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 GVQW2A0A096LPI5 108 aaPredicted RBP5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 C15orf56Q8N910 161 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 BIRC6Q9NR09 4857 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 F8WDY8 70 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 BAALCQ8WXS3 180 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 AP5S1Q9NUS5 200 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 HBDP02042 147 aa5.44□□□□□ -1.54
CDC42SE2-208ENST00000505065 CNBPP62633 177 aaKnown RBP5.43□□□□□ -1.54
CDC42SE2-208ENST00000505065 LINC00269Q8N2A0 174 aa5.43□□□□□ -1.54
CDC42SE2-208ENST00000505065 CHCHD5Q9BSY4 110 aa5.43□□□□□ -1.54
CDC42SE2-208ENST00000505065 A0A087WTM6 91 aa5.43□□□□□ -1.54
CDC42SE2-208ENST00000505065 SERF1AO75920 110 aa5.43□□□□□ -1.54
CDC42SE2-208ENST00000505065 LINC00242Q5T6M2 205 aa5.43□□□□□ -1.54
CDC42SE2-208ENST00000505065 CD164L2Q6UWJ8 174 aa5.43□□□□□ -1.54
CDC42SE2-208ENST00000505065 LOC389332A0A1B0GUA5 103 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 TINCRA0A1B0GVN0 87 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 IGHV3-30P01768 117 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 IGHV3-33P01772 117 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 IGHV3-30-3P0DP02 117 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 IGHV3-30-5P0DP03 117 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 LINC00469Q8N7U9 141 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 CST9LQ9H4G1 147 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 CDPF1Q6NVV7 123 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 Q6ZSA8 131 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 Q8N814 137 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 CIRBPQ14011 172 aaKnown RBP5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 RYR1P21817 5038 aa5.42□□□□□ -1.54
CDC42SE2-208ENST00000505065 IFITM10A6NMD0 228 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 WFDC2Q14508 124 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 RMI2Q96E14 147 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 KLK12Q9UKR0 248 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 A0A087WZ39 114 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 PRSS3P2Q8NHM4 247 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 TM2D2Q9BX73 214 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 UBE2L6O14933 153 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 TNP2Q05952 138 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 IGLV5-39A0A0G2JS06 123 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 KIAA0087Q14695 138 aa5.41□□□□□ -1.54
CDC42SE2-208ENST00000505065 C5orf52A6NGY3 159 aa5.4□□□□□ -1.54
CDC42SE2-208ENST00000505065 PCP4L1A6NKN8 68 aa5.4□□□□□ -1.54
CDC42SE2-208ENST00000505065 TMEM101Q96IK0 257 aa5.4□□□□□ -1.54
CDC42SE2-208ENST00000505065 OPRPNQ99935 248 aaPredicted RBP5.4□□□□□ -1.54
CDC42SE2-208ENST00000505065 COX6A2Q02221 97 aa5.4□□□□□ -1.54
CDC42SE2-208ENST00000505065 RNF151Q2KHN1 245 aa5.4□□□□□ -1.54
CDC42SE2-208ENST00000505065 FA2HQ7L5A8 372 aa5.4□□□□□ -1.54
CDC42SE2-208ENST00000505065 A0A087WX48 190 aa5.4□□□□□ -1.55
CDC42SE2-208ENST00000505065 ANGP03950 147 aaKnown RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms