RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 LINC00959A0A1B0GUT2 108 aa14.33□□□□□ -0.12
CDC42SE2-207ENST00000504701 CCL25O15444 150 aa14.33□□□□□ -0.12
CDC42SE2-207ENST00000504701 SRSF3P84103 164 aaKnown RBP14.33□□□□□ -0.12
CDC42SE2-207ENST00000504701 CFAP161Q6P656 301 aa14.33□□□□□ -0.12
CDC42SE2-207ENST00000504701 IGKV2-24A0A0C4DH68 120 aa14.32□□□□□ -0.12
CDC42SE2-207ENST00000504701 NDUFS6O75380 124 aaKnown RBP14.32□□□□□ -0.12
CDC42SE2-207ENST00000504701 ZNF25P17030 456 aaPredicted RBP14.32□□□□□ -0.12
CDC42SE2-207ENST00000504701 RPL23P62829 140 aaKnown RBP14.32□□□□□ -0.12
CDC42SE2-207ENST00000504701 NRACQ8N912 160 aa14.31□□□□□ -0.12
CDC42SE2-207ENST00000504701 MRAP2Q96G30 205 aa14.31□□□□□ -0.12
CDC42SE2-207ENST00000504701 BTF3L4Q96K17 158 aa14.31□□□□□ -0.12
CDC42SE2-207ENST00000504701 HMCN2Q8NDA2 5059 aa14.31□□□□□ -0.12
CDC42SE2-207ENST00000504701 TRBV27A0A0K0K1C4 114 aa14.3□□□□□ -0.12
CDC42SE2-207ENST00000504701 TMEM101Q96IK0 257 aa14.3□□□□□ -0.12
CDC42SE2-207ENST00000504701 PLAC8Q9NZF1 115 aa14.3□□□□□ -0.12
CDC42SE2-207ENST00000504701 TMEM241Q24JQ0 296 aa14.29□□□□□ -0.12
CDC42SE2-207ENST00000504701 MAJINQ3KP22 176 aa14.29□□□□□ -0.12
CDC42SE2-207ENST00000504701 CDC42SE2Q9NRR3 84 aa14.29□□□□□ -0.12
CDC42SE2-207ENST00000504701 A0A096LNI7 61 aa14.28□□□□□ -0.12
CDC42SE2-207ENST00000504701 C7orf77A4D0Y5 90 aa14.28□□□□□ -0.12
CDC42SE2-207ENST00000504701 PHOX2AO14813 284 aa14.28□□□□□ -0.12
CDC42SE2-207ENST00000504701 RIGQ13278 110 aa14.28□□□□□ -0.12
CDC42SE2-207ENST00000504701 ADIRFQ15847 76 aa14.28□□□□□ -0.12
CDC42SE2-207ENST00000504701 RNASE13Q5GAN3 156 aaKnown RBP14.28□□□□□ -0.12
CDC42SE2-207ENST00000504701 MRPL52Q86TS9 123 aaKnown RBP14.28□□□□□ -0.12
CDC42SE2-207ENST00000504701 MT1HL1P0DM35 61 aa14.26□□□□□ -0.13
CDC42SE2-207ENST00000504701 MRPL51Q4U2R6 128 aaKnown RBP14.26□□□□□ -0.13
CDC42SE2-207ENST00000504701 ZNF664Q8N3J9 261 aa14.26□□□□□ -0.13
CDC42SE2-207ENST00000504701 NAT8BQ9UHF3 227 aa14.25□□□□□ -0.13
CDC42SE2-207ENST00000504701 SUMO2P61956 95 aaKnown RBP14.24□□□□□ -0.13
CDC42SE2-207ENST00000504701 STPG4Q8N801 248 aa14.24□□□□□ -0.13
CDC42SE2-207ENST00000504701 IGHV1-58A0A0C4DH39 117 aa14.23□□□□□ -0.13
CDC42SE2-207ENST00000504701 VCYO14598 125 aa14.23□□□□□ -0.13
CDC42SE2-207ENST00000504701 FCER1GP30273 86 aa14.23□□□□□ -0.13
CDC42SE2-207ENST00000504701 CAMPP49913 170 aa14.23□□□□□ -0.13
CDC42SE2-207ENST00000504701 SS18Q15532 418 aa14.23□□□□□ -0.13
CDC42SE2-207ENST00000504701 FAM74A3Q4VXF1 159 aa14.23□□□□□ -0.13
CDC42SE2-207ENST00000504701 NAT8Q9UHE5 227 aa14.23□□□□□ -0.13
CDC42SE2-207ENST00000504701 UBE2D4Q9Y2X8 147 aa14.23□□□□□ -0.13
CDC42SE2-207ENST00000504701 SMIM27A0A1W2PRY6 76 aa14.22□□□□□ -0.13
CDC42SE2-207ENST00000504701 SERTAD4-AS1Q5TG53 156 aa14.22□□□□□ -0.13
CDC42SE2-207ENST00000504701 FAM104BQ5XKR9 115 aa14.22□□□□□ -0.13
CDC42SE2-207ENST00000504701 CD164L2Q6UWJ8 174 aa14.22□□□□□ -0.13
CDC42SE2-207ENST00000504701 Q6ZUT4 128 aa14.21□□□□□ -0.13
CDC42SE2-207ENST00000504701 CARD19Q96LW7 228 aa14.21□□□□□ -0.13
CDC42SE2-207ENST00000504701 Q6ZRU5 148 aa14.19□□□□□ -0.14
CDC42SE2-207ENST00000504701 TRAV13-1A0A0B4J241 112 aa14.18□□□□□ -0.14
CDC42SE2-207ENST00000504701 MRPL54Q6P161 138 aaKnown RBP14.18□□□□□ -0.14
CDC42SE2-207ENST00000504701 C7orf33Q8WU49 177 aa14.18□□□□□ -0.14
CDC42SE2-207ENST00000504701 RPL39P62891 51 aaKnown RBP14.17□□□□□ -0.14
CDC42SE2-207ENST00000504701 FAM104AQ969W3 186 aa14.17□□□□□ -0.14
CDC42SE2-207ENST00000504701 KIR2DL4Q99706 377 aa14.17□□□□□ -0.14
CDC42SE2-207ENST00000504701 TNXBP22105 4242 aa14.16□□□□□ -0.14
CDC42SE2-207ENST00000504701 IGLV4-69A0A075B6H9 119 aa14.16□□□□□ -0.14
CDC42SE2-207ENST00000504701 PRR3P79522 188 aaKnown RBP14.16□□□□□ -0.14
CDC42SE2-207ENST00000504701 SYCNQ0VAF6 134 aa14.16□□□□□ -0.14
CDC42SE2-207ENST00000504701 PEA15Q15121 130 aa14.16□□□□□ -0.14
CDC42SE2-207ENST00000504701 PLA2G2DQ9UNK4 145 aa14.16□□□□□ -0.14
CDC42SE2-207ENST00000504701 ZNF561-AS1K7EIQ3 104 aa14.15□□□□□ -0.14
CDC42SE2-207ENST00000504701 C5orf38Q86SI9 138 aa14.15□□□□□ -0.14
CDC42SE2-207ENST00000504701 CSDC2Q9Y534 153 aaKnown RBP14.15□□□□□ -0.14
CDC42SE2-207ENST00000504701 D6R8Y8 96 aa14.14□□□□□ -0.15
CDC42SE2-207ENST00000504701 PPP1R2P9O14990 202 aa14.14□□□□□ -0.15
CDC42SE2-207ENST00000504701 TNFRSF6BO95407 300 aa14.14□□□□□ -0.15
CDC42SE2-207ENST00000504701 PPP1R17O96001 155 aa14.14□□□□□ -0.15
CDC42SE2-207ENST00000504701 NPYP01303 97 aa14.14□□□□□ -0.15
CDC42SE2-207ENST00000504701 CKS2P33552 79 aa14.14□□□□□ -0.15
CDC42SE2-207ENST00000504701 OPRPNQ99935 248 aaPredicted RBP14.14□□□□□ -0.15
CDC42SE2-207ENST00000504701 A0A1B0GXF2 115 aa14.13□□□□□ -0.15
CDC42SE2-207ENST00000504701 C1orf196B1AJZ1 125 aa14.13□□□□□ -0.15
CDC42SE2-207ENST00000504701 COX7A2LO14548 114 aa14.13□□□□□ -0.15
CDC42SE2-207ENST00000504701 ODF1Q14990 250 aa14.13□□□□□ -0.15
CDC42SE2-207ENST00000504701 TRBV24-1A0A075B6N3 115 aa14.12□□□□□ -0.15
CDC42SE2-207ENST00000504701 MALP21145 153 aa14.12□□□□□ -0.15
CDC42SE2-207ENST00000504701 C20orf78Q9BR46 151 aa14.12□□□□□ -0.15
CDC42SE2-207ENST00000504701 LINC00862A6NCI5 91 aa14.11□□□□□ -0.15
CDC42SE2-207ENST00000504701 TCAPO15273 167 aa14.11□□□□□ -0.15
CDC42SE2-207ENST00000504701 HBBP68871 147 aa14.11□□□□□ -0.15
CDC42SE2-207ENST00000504701 SMIM2Q9BVW6 85 aa14.11□□□□□ -0.15
CDC42SE2-207ENST00000504701 PTTG1IPP53801 180 aa14.1□□□□□ -0.15
CDC42SE2-207ENST00000504701 GAGE2BQ13066 116 aa14.1□□□□□ -0.15
CDC42SE2-207ENST00000504701 TIMM21Q9BVV7 248 aa14.1□□□□□ -0.15
CDC42SE2-207ENST00000504701 A0A0J9YXV3 536 aa14.09□□□□□ -0.15
CDC42SE2-207ENST00000504701 RPL32P62910 135 aaKnown RBP14.09□□□□□ -0.15
CDC42SE2-207ENST00000504701 A0A1B0GW15 77 aa14.08□□□□□ -0.16
CDC42SE2-207ENST00000504701 A0A1W2PNN7 141 aa14.08□□□□□ -0.16
CDC42SE2-207ENST00000504701 CAMK2N2Q96S95 79 aa14.08□□□□□ -0.16
CDC42SE2-207ENST00000504701 UBR4Q5T4S7 5183 aa14.08□□□□□ -0.16
CDC42SE2-207ENST00000504701 SMDT1Q9H4I9 107 aa14.07□□□□□ -0.16
CDC42SE2-207ENST00000504701 LINC00474Q9P2X8 69 aa14.07□□□□□ -0.16
CDC42SE2-207ENST00000504701 LOC107984640A0A0U1RRK4 108 aa14.06□□□□□ -0.16
CDC42SE2-207ENST00000504701 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.06□□□□□ -0.16
CDC42SE2-207ENST00000504701 TMEM18Q96B42 140 aa14.06□□□□□ -0.16
CDC42SE2-207ENST00000504701 SPAG11BQ08648 103 aa14.05□□□□□ -0.16
CDC42SE2-207ENST00000504701 SMAGPQ0VAQ4 97 aa14.05□□□□□ -0.16
CDC42SE2-207ENST00000504701 F8W036 122 aa14.04□□□□□ -0.16
CDC42SE2-207ENST00000504701 APOMO95445 188 aa14.02□□□□□ -0.17
CDC42SE2-207ENST00000504701 S100A8P05109 93 aa14.02□□□□□ -0.17
CDC42SE2-207ENST00000504701 RPL18AQ02543 176 aaKnown RBP14.02□□□□□ -0.17
CDC42SE2-207ENST00000504701 C2orf48Q96LS8 159 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms