RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 HIST1H2BKO60814 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST1H2BJP06899 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST1H2BOP23527 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST1H2BBP33778 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST1H2BDP58876 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST1H2BCP62807 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 REG3AQ06141 175 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST2H2BEQ16778 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST1H2BHQ93079 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST1H2BNQ99877 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 HIST1H2BMQ99879 126 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 PRR34Q9NV39 138 aa12.34□□□□□ -0.43
TSSC4-210ENST00000496468 NFE4Q86UQ8 179 aa12.33□□□□□ -0.44
TSSC4-210ENST00000496468 LINC01549A6NIU2 74 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 HBDP02042 147 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 PMCHL1Q16048 86 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 MIAQ16674 131 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 ENHOQ6UWT2 76 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 ZNF664Q8N3J9 261 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 RMI2Q96E14 147 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 CDC42SE2Q9NRR3 84 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 PYGO1Q9Y3Y4 419 aa12.32□□□□□ -0.44
TSSC4-210ENST00000496468 IGKV3OR2-268A0A0C4DH90 116 aa12.31□□□□□ -0.44
TSSC4-210ENST00000496468 HSBP1O75506 76 aa12.31□□□□□ -0.44
TSSC4-210ENST00000496468 SERF1AO75920 110 aa12.31□□□□□ -0.44
TSSC4-210ENST00000496468 RNASE13Q5GAN3 156 aaKnown RBP12.31□□□□□ -0.44
TSSC4-210ENST00000496468 FRAS1Q86XX4 4008 aa12.3□□□□□ -0.44
TSSC4-210ENST00000496468 IGLV4-3A0A075B6K6 122 aa12.3□□□□□ -0.44
TSSC4-210ENST00000496468 MRPS36P82909 103 aaKnown RBP12.3□□□□□ -0.44
TSSC4-210ENST00000496468 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
TSSC4-210ENST00000496468 C1orf43Q9BWL3 253 aa12.3□□□□□ -0.44
TSSC4-210ENST00000496468 DNAH10Q8IVF4 4471 aa12.29□□□□□ -0.44
TSSC4-210ENST00000496468 IGKV2D-24A0A075B6R9 120 aa12.29□□□□□ -0.44
TSSC4-210ENST00000496468 A0A096LNJ9 63 aa12.29□□□□□ -0.44
TSSC4-210ENST00000496468 NPSP0C0P6 89 aa12.29□□□□□ -0.44
TSSC4-210ENST00000496468 LINC00310P59036 64 aa12.29□□□□□ -0.44
TSSC4-210ENST00000496468 Q6ZN92 141 aa12.29□□□□□ -0.44
TSSC4-210ENST00000496468 TMEM141Q96I45 108 aa12.29□□□□□ -0.44
TSSC4-210ENST00000496468 SCGB3A1Q96QR1 104 aa12.29□□□□□ -0.44
TSSC4-210ENST00000496468 IGIPA6NJ69 53 aa12.28□□□□□ -0.44
TSSC4-210ENST00000496468 ERASQ7Z444 233 aa12.28□□□□□ -0.44
TSSC4-210ENST00000496468 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
TSSC4-210ENST00000496468 IGLV10-54A0A075B6I4 117 aa12.27□□□□□ -0.45
TSSC4-210ENST00000496468 TRAV8-4A0A0B4J246 113 aa12.27□□□□□ -0.45
TSSC4-210ENST00000496468 PAPPA-AS1Q5QFB9 102 aa12.27□□□□□ -0.45
TSSC4-210ENST00000496468 TEX43Q6ZNM6 134 aa12.27□□□□□ -0.45
TSSC4-210ENST00000496468 Q6ZRN7 208 aaPredicted RBP12.27□□□□□ -0.45
TSSC4-210ENST00000496468 TM2D2Q9BX73 214 aa12.27□□□□□ -0.45
TSSC4-210ENST00000496468 IFITM10A6NMD0 228 aa12.26□□□□□ -0.45
TSSC4-210ENST00000496468 PSCAO43653 123 aa12.26□□□□□ -0.45
TSSC4-210ENST00000496468 FAM104AQ969W3 186 aa12.26□□□□□ -0.45
TSSC4-210ENST00000496468 C2orf88Q9BSF0 95 aa12.26□□□□□ -0.45
TSSC4-210ENST00000496468 COX11Q9Y6N1 276 aa12.26□□□□□ -0.45
TSSC4-210ENST00000496468 RTL8CO15255 209 aa12.25□□□□□ -0.45
TSSC4-210ENST00000496468 PDZD11Q5EBL8 140 aa12.25□□□□□ -0.45
TSSC4-210ENST00000496468 TRAV13-1A0A0B4J241 112 aa12.24□□□□□ -0.45
TSSC4-210ENST00000496468 LINC00959A0A1B0GUT2 108 aa12.24□□□□□ -0.45
TSSC4-210ENST00000496468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.24□□□□□ -0.45
TSSC4-210ENST00000496468 FAM19A2Q8N3H0 131 aa12.24□□□□□ -0.45
TSSC4-210ENST00000496468 DNAH17Q9UFH2 4485 aa12.24□□□□□ -0.45
TSSC4-210ENST00000496468 ATP5LO75964 103 aa12.23□□□□□ -0.45
TSSC4-210ENST00000496468 SS18Q15532 418 aa12.23□□□□□ -0.45
TSSC4-210ENST00000496468 CHCHD10Q8WYQ3 142 aaPredicted RBP12.23□□□□□ -0.45
TSSC4-210ENST00000496468 VCX2Q9H322 139 aa12.23□□□□□ -0.45
TSSC4-210ENST00000496468 NUPR1O60356 82 aa12.22□□□□□ -0.45
TSSC4-210ENST00000496468 NDUFA6P56556 154 aa12.22□□□□□ -0.45
TSSC4-210ENST00000496468 COA6Q5JTJ3 125 aaKnown RBP12.22□□□□□ -0.45
TSSC4-210ENST00000496468 LINC00173Q6ZV60 143 aa12.22□□□□□ -0.45
TSSC4-210ENST00000496468 AMELXQ99217 191 aa12.22□□□□□ -0.45
TSSC4-210ENST00000496468 CCL25O15444 150 aa12.21□□□□□ -0.45
TSSC4-210ENST00000496468 XCL1P47992 114 aa12.21□□□□□ -0.45
TSSC4-210ENST00000496468 ZC2HC1BQ5TFG8 222 aa12.21□□□□□ -0.45
TSSC4-210ENST00000496468 LINC00336Q6ZUF6 198 aa12.21□□□□□ -0.45
TSSC4-210ENST00000496468 BAALCQ8WXS3 180 aa12.21□□□□□ -0.45
TSSC4-210ENST00000496468 GAGE12HA6NDE8 117 aa12.19□□□□□ -0.46
TSSC4-210ENST00000496468 LEPROTL1O95214 131 aa12.19□□□□□ -0.46
TSSC4-210ENST00000496468 FAT2Q9NYQ8 4349 aa12.19□□□□□ -0.46
TSSC4-210ENST00000496468 PRSS29PA6NIE9 313 aa12.18□□□□□ -0.46
TSSC4-210ENST00000496468 UBE2D1P51668 147 aa12.18□□□□□ -0.46
TSSC4-210ENST00000496468 KRTAP26-1Q6PEX3 210 aa12.18□□□□□ -0.46
TSSC4-210ENST00000496468 IFI27L1Q96BM0 104 aa12.18□□□□□ -0.46
TSSC4-210ENST00000496468 HSPB8Q9UJY1 196 aa12.18□□□□□ -0.46
TSSC4-210ENST00000496468 TNP2Q05952 138 aa12.17□□□□□ -0.46
TSSC4-210ENST00000496468 PMVKQ15126 192 aa12.17□□□□□ -0.46
TSSC4-210ENST00000496468 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
TSSC4-210ENST00000496468 FOXI1Q12951 378 aa12.16□□□□□ -0.46
TSSC4-210ENST00000496468 MAPKAPK5-AS1Q8N8E1 139 aa12.16□□□□□ -0.46
TSSC4-210ENST00000496468 CST9LQ9H4G1 147 aa12.16□□□□□ -0.46
TSSC4-210ENST00000496468 S100A6P06703 90 aa12.15□□□□□ -0.46
TSSC4-210ENST00000496468 FABP4P15090 132 aa12.15□□□□□ -0.46
TSSC4-210ENST00000496468 LECT2O14960 151 aa12.14□□□□□ -0.47
TSSC4-210ENST00000496468 PRSS1P07477 247 aa12.14□□□□□ -0.47
TSSC4-210ENST00000496468 LINC00242Q5T6M2 205 aa12.14□□□□□ -0.47
TSSC4-210ENST00000496468 A0A087WTM6 91 aa12.13□□□□□ -0.47
TSSC4-210ENST00000496468 LRCOL1A6NCL2 159 aa12.13□□□□□ -0.47
TSSC4-210ENST00000496468 COX7A2LO14548 114 aa12.13□□□□□ -0.47
TSSC4-210ENST00000496468 EREGO14944 169 aa12.13□□□□□ -0.47
TSSC4-210ENST00000496468 SEC11AP67812 179 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms