RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 OOSP1A8MZH6 123 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 J3QQQ9 107 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 HMGN4O00479 90 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 SSSCA1O60232 199 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 TACC2O95359 2948 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 IGKV1D-33P01593 117 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 IGKV1-33P01594 117 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 PRM2P04554 102 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 CRYGSP22914 178 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 ZNF80P51504 273 aaPredicted RBP2.72□□□□□ -1.97
SF3B1-212ENST00000496458 DSCR4P56555 118 aaPredicted RBP2.72□□□□□ -1.97
SF3B1-212ENST00000496458 RTL8BQ17RB0 113 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 C16orf47Q6ZP98 133 aaPredicted RBP2.72□□□□□ -1.97
SF3B1-212ENST00000496458 RPS19BP1Q86WX3 136 aaKnown RBP2.72□□□□□ -1.97
SF3B1-212ENST00000496458 Q96M85 177 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 UPK3BQ9BT76 320 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 AICDAQ9GZX7 198 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 AGPAT4-IT1Q9H0P7 198 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 ABCA12Q86UK0 2595 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 SPG11Q96JI7 2443 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 MAST4O15021 2626 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 ITPR2Q14571 2701 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 ICE1Q9Y2F5 2266 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 FREM3P0C091 2139 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 FAM236AA0A1B0GUQ0 79 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 FAM236BA0A1B0GV22 79 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 CPSF4LA6NMK7 179 aaKnown RBP2.71□□□□□ -1.98
SF3B1-212ENST00000496458 C17orf51A8MQB3 221 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 LECT2O14960 151 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 PGLYRP1O75594 196 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-212ENST00000496458 TRGV3P03979 118 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 ACYP1P07311 99 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 ASAH2BP0C7U1 165 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 CCL3P10147 92 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 COL8A2P25067 703 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 FKBP2P26885 142 aaKnown RBP2.71□□□□□ -1.98
SF3B1-212ENST00000496458 RPL27AP46776 148 aaKnown RBP2.71□□□□□ -1.98
SF3B1-212ENST00000496458 FXYD2P54710 66 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 DEFB110Q30KQ9 67 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 C1orf140Q5VVS0 124 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 C6orf201Q7Z4U5 140 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 LYZL2Q7Z4W2 148 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 OR5AS1Q8N127 324 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 RPP25LQ8N5L8 163 aaKnown RBP2.71□□□□□ -1.98
SF3B1-212ENST00000496458 COPS9Q8WXC6 57 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 BORCS8Q96FH0 119 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 WFDC6Q9BQY6 131 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 XAGE1AQ9HD64 81 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 AKAP6Q13023 2319 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 MED12Q93074 2177 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 PKDREJQ9NTG1 2253 aa2.71□□□□□ -1.98
SF3B1-212ENST00000496458 TRAV12-2A0A075B6T6 113 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 TRAV2A0A0B4J234 112 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 TRAV13-1A0A0B4J241 112 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 A0A0J9YW62 118 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 RBAKDNA6NC62 111 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 BUB1B-PAK6H3BSN5 160 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 ATOX1O00244 68 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 SH2D1AO60880 128 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 NPYP01303 97 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 STATHP02808 62 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 IL4P05112 153 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 UBE2D3P61077 147 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 UBE2D2P62837 147 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 LINC01590Q5TEZ4 76 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 CRYBG3Q68DQ2 2970 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 AAED1Q7RTV5 226 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 ODF3Q96PU9 254 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 MGST2Q99735 147 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 RNF5Q99942 180 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 NHP2Q9NX24 153 aaKnown RBP2.7□□□□□ -1.98
SF3B1-212ENST00000496458 UBR5O95071 2799 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-212ENST00000496458 ABCA4P78363 2273 aa2.7□□□□□ -1.98
SF3B1-212ENST00000496458 DOPEY1Q5JWR5 2465 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 MED12LQ86YW9 2145 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 ROS1P08922 2347 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 CREBBPQ92793 2442 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 TRAV27A0A087WT01 109 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 MYMXA0A1B0GTQ4 84 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 A6NED7 52 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 H0YGG7 62 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 H3BMM0 161 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 K7EM74 188 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 M0R378 163 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 SLC25A20O43772 301 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 CST7O76096 145 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 IGKCP01834 107 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 GYPBP06028 91 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 PYYP10082 97 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 COX6A1P12074 109 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 GCHFRP30047 84 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 MRPS36P82909 103 aaKnown RBP2.69□□□□□ -1.98
SF3B1-212ENST00000496458 VMA21Q3ZAQ7 101 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 DEFB121Q5J5C9 76 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 TMEM170BQ5T4T1 132 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 SLC48A1Q6P1K1 146 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 Q6ZQT7 251 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 RPRMLQ8N4K4 120 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 LINC00304Q8N9R0 145 aa2.69□□□□□ -1.98
SF3B1-212ENST00000496458 UBE2WQ96B02 151 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms