RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TMEM243Q9BU79 118 aa7.26□□□□□ -1.25
HDAC3-214ENST00000495485 CHCHD7Q9BUK0 85 aa7.26□□□□□ -1.25
HDAC3-214ENST00000495485 IGLV4-3A0A075B6K6 122 aa7.25□□□□□ -1.25
HDAC3-214ENST00000495485 IGHV3-38A0A0C4DH36 116 aa7.25□□□□□ -1.25
HDAC3-214ENST00000495485 C11orf86A6NJI1 115 aa7.25□□□□□ -1.25
HDAC3-214ENST00000495485 PAX4O43316 350 aa7.25□□□□□ -1.25
HDAC3-214ENST00000495485 ZNF25P17030 456 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-214ENST00000495485 CTAG1AP78358 180 aa7.25□□□□□ -1.25
HDAC3-214ENST00000495485 Q8NAQ8 132 aa7.25□□□□□ -1.25
HDAC3-214ENST00000495485 UBE2D4Q9Y2X8 147 aa7.25□□□□□ -1.25
HDAC3-214ENST00000495485 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
HDAC3-214ENST00000495485 NFE4Q86UQ8 179 aa7.24□□□□□ -1.25
HDAC3-214ENST00000495485 BOD1L2Q8IYS8 172 aa7.24□□□□□ -1.25
HDAC3-214ENST00000495485 ATP6V0E2Q8NHE4 81 aa7.24□□□□□ -1.25
HDAC3-214ENST00000495485 DEFB104AQ8WTQ1 72 aa7.24□□□□□ -1.25
HDAC3-214ENST00000495485 WWC2-AS2Q96NR7 200 aa7.24□□□□□ -1.25
HDAC3-214ENST00000495485 AMELXQ99217 191 aa7.24□□□□□ -1.25
HDAC3-214ENST00000495485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-214ENST00000495485 IGKV2-29A2NJV5 120 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-214ENST00000495485 E9PLD3 99 aa7.23□□□□□ -1.25
HDAC3-214ENST00000495485 GYPEP15421 78 aa7.23□□□□□ -1.25
HDAC3-214ENST00000495485 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
HDAC3-214ENST00000495485 OR5A1Q8NGJ0 315 aa7.23□□□□□ -1.25
HDAC3-214ENST00000495485 TRAV26-1A0A087WT03 109 aa7.22□□□□□ -1.25
HDAC3-214ENST00000495485 TRBV6-8A0A0A6YYG3 113 aa7.22□□□□□ -1.25
HDAC3-214ENST00000495485 TINCRA0A1B0GVN0 87 aa7.22□□□□□ -1.25
HDAC3-214ENST00000495485 H3BRM9 83 aa7.22□□□□□ -1.25
HDAC3-214ENST00000495485 FGF6P10767 208 aa7.22□□□□□ -1.25
HDAC3-214ENST00000495485 MRPL23Q16540 153 aaKnown RBP7.22□□□□□ -1.25
HDAC3-214ENST00000495485 CHAC1Q9BUX1 264 aa7.22□□□□□ -1.25
HDAC3-214ENST00000495485 C11orf68Q9H3H3 251 aaKnown RBP7.22□□□□□ -1.25
HDAC3-214ENST00000495485 GEMIN7Q9H840 131 aaKnown RBP7.22□□□□□ -1.25
HDAC3-214ENST00000495485 HIGD1BQ9P298 99 aa7.22□□□□□ -1.25
HDAC3-214ENST00000495485 F5H768 121 aa7.21□□□□□ -1.26
HDAC3-214ENST00000495485 COL5A1-AS1Q5SY13 56 aa7.21□□□□□ -1.26
HDAC3-214ENST00000495485 PLEKHB2Q96CS7 222 aa7.21□□□□□ -1.26
HDAC3-214ENST00000495485 Q9UF83 564 aa7.21□□□□□ -1.26
HDAC3-214ENST00000495485 IGLV4-69A0A075B6H9 119 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 TRAV8-6A0A0B4J262 113 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 LINC00694P0DN24 101 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 TIRAPP58753 221 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 HERVK_113P63121 156 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 NTM-AS1Q6ZSK4 140 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 CHCHD5Q9BSY4 110 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 ICOSQ9Y6W8 199 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 TENM2Q9NT68 2774 aa7.2□□□□□ -1.26
HDAC3-214ENST00000495485 CSMD3Q7Z407 3707 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 DYNC2H1Q8NCM8 4307 aaKnown RBP7.19□□□□□ -1.26
HDAC3-214ENST00000495485 LOC100131303A0A0U1RQF7 123 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 H3BNG1 76 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 LEPROTO15243 131 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 DEFB4AO15263 64 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
HDAC3-214ENST00000495485 HSD52Q0P140 79 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 BATFQ16520 125 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 TAL2Q16559 108 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 OPRPNQ99935 248 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-214ENST00000495485 SNHG12Q9BXW3 62 aa7.19□□□□□ -1.26
HDAC3-214ENST00000495485 A0A0J9YXV3 536 aa7.18□□□□□ -1.26
HDAC3-214ENST00000495485 A6NDN8 102 aa7.18□□□□□ -1.26
HDAC3-214ENST00000495485 C3orf84H3BNL1 204 aa7.18□□□□□ -1.26
HDAC3-214ENST00000495485 CCL25O15444 150 aa7.18□□□□□ -1.26
HDAC3-214ENST00000495485 FAM19A3Q7Z5A8 133 aa7.18□□□□□ -1.26
HDAC3-214ENST00000495485 CDC42SE2Q9NRR3 84 aa7.18□□□□□ -1.26
HDAC3-214ENST00000495485 A0A1B0GUV1 79 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 HTN3P15516 51 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 ZNF22P17026 224 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-214ENST00000495485 HINT1P49773 126 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-214ENST00000495485 UBE2D1P51668 147 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 TCTAP57738 103 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 CEMP1Q6PRD7 247 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-214ENST00000495485 SCGB1D4Q6XE38 83 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 Q6ZUT4 128 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 PCP2Q8IVA1 136 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 LINC00469Q8N7U9 141 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 CELA1Q9UNI1 258 aa7.17□□□□□ -1.26
HDAC3-214ENST00000495485 IGKV2D-26A0A0A0MRZ7 120 aa7.16□□□□□ -1.26
HDAC3-214ENST00000495485 A0A0J9YY99 117 aa7.16□□□□□ -1.26
HDAC3-214ENST00000495485 ZNF815PA8K554 130 aa7.16□□□□□ -1.26
HDAC3-214ENST00000495485 TMEM262E9PQX1 116 aa7.16□□□□□ -1.26
HDAC3-214ENST00000495485 J3QQQ9 107 aa7.16□□□□□ -1.26
HDAC3-214ENST00000495485 GAGE6Q13070 117 aa7.16□□□□□ -1.26
HDAC3-214ENST00000495485 MPV17L2Q567V2 206 aa7.16□□□□□ -1.26
HDAC3-214ENST00000495485 C12orf74Q32Q52 190 aa7.15□□□□□ -1.26
HDAC3-214ENST00000495485 C2orf91Q6ZV80 131 aa7.15□□□□□ -1.26
HDAC3-214ENST00000495485 C11orf45Q8TAV5 145 aa7.15□□□□□ -1.26
HDAC3-214ENST00000495485 MUC7Q8TAX7 377 aa7.15□□□□□ -1.26
HDAC3-214ENST00000495485 HIST1H4GQ99525 98 aa7.15□□□□□ -1.26
HDAC3-214ENST00000495485 RETNQ9HD89 108 aa7.15□□□□□ -1.26
HDAC3-214ENST00000495485 IGLV5-45A0A087WSX0 123 aa7.14□□□□□ -1.27
HDAC3-214ENST00000495485 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
HDAC3-214ENST00000495485 A0A0J9YWU9 116 aa7.14□□□□□ -1.27
HDAC3-214ENST00000495485 EREGO14944 169 aa7.14□□□□□ -1.27
HDAC3-214ENST00000495485 SS18Q15532 418 aa7.14□□□□□ -1.27
HDAC3-214ENST00000495485 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
HDAC3-214ENST00000495485 BVES-AS1Q5T3Y7 98 aa7.14□□□□□ -1.27
HDAC3-214ENST00000495485 LELP1Q5T871 98 aa7.14□□□□□ -1.27
HDAC3-214ENST00000495485 ORAOV1Q8WV07 137 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms