RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 SLC25A29Q8N8R3 303 aa11.09□□□□□ -0.63
SHISA5-216ENST00000494854 H3BRM9 83 aa11.08□□□□□ -0.64
SHISA5-216ENST00000494854 FXYD2P54710 66 aa11.08□□□□□ -0.64
SHISA5-216ENST00000494854 A0A0J9YXV3 536 aa11.07□□□□□ -0.64
SHISA5-216ENST00000494854 TM2D2Q9BX73 214 aa11.07□□□□□ -0.64
SHISA5-216ENST00000494854 CIDEAO60543 219 aa11.07□□□□□ -0.64
SHISA5-216ENST00000494854 VAMP3Q15836 100 aa11.07□□□□□ -0.64
SHISA5-216ENST00000494854 TMEM223A0PJW6 202 aa11.06□□□□□ -0.64
SHISA5-216ENST00000494854 K7EP13 123 aa11.06□□□□□ -0.64
SHISA5-216ENST00000494854 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
SHISA5-216ENST00000494854 UBE2V1Q13404 147 aa11.06□□□□□ -0.64
SHISA5-216ENST00000494854 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
SHISA5-216ENST00000494854 HIST1H4GQ99525 98 aa11.06□□□□□ -0.64
SHISA5-216ENST00000494854 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
SHISA5-216ENST00000494854 PTTG1IPP53801 180 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 UBE2D3P61077 147 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 UBE2D2P62837 147 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 RNASE13Q5GAN3 156 aaKnown RBP11.05□□□□□ -0.64
SHISA5-216ENST00000494854 GAGE12JA6NER3 117 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 TSPEAR-AS2P59090 65 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 MRPS36P82909 103 aaKnown RBP11.05□□□□□ -0.64
SHISA5-216ENST00000494854 GAGE4Q13068 117 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 GAGE5Q13069 117 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 GAGE13Q4V321 117 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
SHISA5-216ENST00000494854 C9orf118A6NHY6 69 aa11.04□□□□□ -0.64
SHISA5-216ENST00000494854 Q6ZUT4 128 aa11.04□□□□□ -0.64
SHISA5-216ENST00000494854 PLEKHB2Q96CS7 222 aa11.04□□□□□ -0.64
SHISA5-216ENST00000494854 TRBV6-4A0A1B0GX49 114 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 J3QQQ9 107 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 CCL25O15444 150 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 SMIM13P0DJ93 91 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 RAB37Q96AX2 223 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 TIMM21Q9BVV7 248 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 TRGV4A0A0C4DH28 118 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 A8MZ25 164 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 LEPROTO15243 131 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 TENM3Q9P273 2699 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
SHISA5-216ENST00000494854 LGALS3P17931 250 aaKnown RBP11.02□□□□□ -0.65
SHISA5-216ENST00000494854 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.65
SHISA5-216ENST00000494854 KIR2DL5BQ8NHK3 375 aa11.02□□□□□ -0.65
SHISA5-216ENST00000494854 X6R8D5 127 aa11.02□□□□□ -0.65
SHISA5-216ENST00000494854 DGAT2L7PQ6IED9 249 aa11.01□□□□□ -0.65
SHISA5-216ENST00000494854 NHP2Q9NX24 153 aaKnown RBP11.01□□□□□ -0.65
SHISA5-216ENST00000494854 TINCRA0A1B0GVN0 87 aa11.01□□□□□ -0.65
SHISA5-216ENST00000494854 SMIM9A6NGZ8 99 aa11.01□□□□□ -0.65
SHISA5-216ENST00000494854 FHL2Q14192 279 aa11.01□□□□□ -0.65
SHISA5-216ENST00000494854 IGHV3-64A0A075B6Q5 118 aa11□□□□□ -0.65
SHISA5-216ENST00000494854 A0A0J9YY99 117 aa11□□□□□ -0.65
SHISA5-216ENST00000494854 LOC100131303A0A0U1RQF7 123 aa11□□□□□ -0.65
SHISA5-216ENST00000494854 H3BUT2 72 aa11□□□□□ -0.65
SHISA5-216ENST00000494854 GTSF1LQ9H1H1 148 aa11□□□□□ -0.65
SHISA5-216ENST00000494854 LINC00694P0DN24 101 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 SBSPONQ8IVN8 264 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 WWC2-AS2Q96NR7 200 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 K7ERJ3 54 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 IGHV4-30-4P0DP06 118 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 DEFB130BP0DP73 79 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 DEFB130AP0DP74 79 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 UBE2D1P51668 147 aa10.99□□□□□ -0.65
SHISA5-216ENST00000494854 NAA38Q9BRA0 125 aaKnown RBP10.99□□□□□ -0.65
SHISA5-216ENST00000494854 SRSF9Q13242 221 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHISA5-216ENST00000494854 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
SHISA5-216ENST00000494854 APOC4P55056 127 aa10.97□□□□□ -0.65
SHISA5-216ENST00000494854 IGHV3-30-3P0DP02 117 aa10.97□□□□□ -0.65
SHISA5-216ENST00000494854 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
SHISA5-216ENST00000494854 C12orf74Q32Q52 190 aa10.97□□□□□ -0.65
SHISA5-216ENST00000494854 SPANXB1Q9NS25 103 aaPredicted RBP10.97□□□□□ -0.65
SHISA5-216ENST00000494854 DEFB135Q30KP9 77 aa10.96□□□□□ -0.65
SHISA5-216ENST00000494854 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.65
SHISA5-216ENST00000494854 TMEM243Q9BU79 118 aa10.96□□□□□ -0.65
SHISA5-216ENST00000494854 GEMIN7Q9H840 131 aaKnown RBP10.96□□□□□ -0.65
SHISA5-216ENST00000494854 IGHV1-58A0A0C4DH39 117 aa10.96□□□□□ -0.66
SHISA5-216ENST00000494854 A0A1W2PPM0 123 aa10.96□□□□□ -0.66
SHISA5-216ENST00000494854 UBE2L6O14933 153 aa10.96□□□□□ -0.66
SHISA5-216ENST00000494854 TIRAPP58753 221 aa10.96□□□□□ -0.66
SHISA5-216ENST00000494854 TRAV8-3A0A0A6YYJ7 113 aa10.95□□□□□ -0.66
SHISA5-216ENST00000494854 TM2D3Q9BRN9 247 aa10.95□□□□□ -0.66
SHISA5-216ENST00000494854 TMEM238LA0A1B0GVL6 79 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 A0A1B0GWB2 263 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 GAGE10A6NGK3 116 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 A6NJY4 79 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 HUWE1Q7Z6Z7 4374 aaKnown RBP10.94□□□□□ -0.66
SHISA5-216ENST00000494854 IGLV5-45A0A087WSX0 123 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 H7C423 109 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 SPINK8P0C7L1 97 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 VSIG2Q96IQ7 327 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 CDC42SE2Q9NRR3 84 aa10.94□□□□□ -0.66
SHISA5-216ENST00000494854 LYRM9A8MSI8 78 aa10.93□□□□□ -0.66
SHISA5-216ENST00000494854 FAM222AQ5U5X8 452 aa10.93□□□□□ -0.66
SHISA5-216ENST00000494854 GTF2H5Q6ZYL4 71 aa10.93□□□□□ -0.66
SHISA5-216ENST00000494854 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
SHISA5-216ENST00000494854 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
SHISA5-216ENST00000494854 IGHV3-30P01768 117 aa10.92□□□□□ -0.66
SHISA5-216ENST00000494854 IGHV3-30-5P0DP03 117 aa10.92□□□□□ -0.66
SHISA5-216ENST00000494854 FABP2P12104 132 aa10.92□□□□□ -0.66
SHISA5-216ENST00000494854 HERVK_113P63121 156 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms