RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZNF664Q8N3J9 261 aa9.78□□□□□ -0.84
BRCA1-223ENST00000494123 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
BRCA1-223ENST00000494123 IGKV2D-24A0A075B6R9 120 aa9.77□□□□□ -0.85
BRCA1-223ENST00000494123 PSCAO43653 123 aa9.77□□□□□ -0.85
BRCA1-223ENST00000494123 URB1-AS1Q96HZ7 61 aa9.77□□□□□ -0.85
BRCA1-223ENST00000494123 CDC42SE2Q9NRR3 84 aa9.77□□□□□ -0.85
BRCA1-223ENST00000494123 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
BRCA1-223ENST00000494123 CHCHD1Q96BP2 118 aaKnown RBP9.76□□□□□ -0.85
BRCA1-223ENST00000494123 C1orf43Q9BWL3 253 aa9.76□□□□□ -0.85
BRCA1-223ENST00000494123 TM2D2Q9BX73 214 aa9.76□□□□□ -0.85
BRCA1-223ENST00000494123 PYGO1Q9Y3Y4 419 aa9.76□□□□□ -0.85
BRCA1-223ENST00000494123 LINC01549A6NIU2 74 aa9.75□□□□□ -0.85
BRCA1-223ENST00000494123 RNASE13Q5GAN3 156 aaKnown RBP9.75□□□□□ -0.85
BRCA1-223ENST00000494123 Q6ZUT4 128 aa9.75□□□□□ -0.85
BRCA1-223ENST00000494123 COX11Q9Y6N1 276 aa9.75□□□□□ -0.85
BRCA1-223ENST00000494123 RTL8CO15255 209 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-223ENST00000494123 RYR3Q15413 4870 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 IGLV10-54A0A075B6I4 117 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 TRAV8-4A0A0B4J246 113 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 C1orf196B1AJZ1 125 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BKO60814 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HSBP1O75506 76 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HBDP02042 147 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
BRCA1-223ENST00000494123 PMCHL1Q16048 86 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-223ENST00000494123 Q6ZN92 141 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 Q6ZRN7 208 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 TMEM141Q96I45 108 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 SCGB3A1Q96QR1 104 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
BRCA1-223ENST00000494123 IGLV4-3A0A075B6K6 122 aa9.72□□□□□ -0.85
BRCA1-223ENST00000494123 IGIPA6NJ69 53 aa9.72□□□□□ -0.85
BRCA1-223ENST00000494123 SERF1AO75920 110 aa9.72□□□□□ -0.85
BRCA1-223ENST00000494123 SS18Q15532 418 aa9.72□□□□□ -0.85
BRCA1-223ENST00000494123 LINC00336Q6ZUF6 198 aa9.72□□□□□ -0.85
BRCA1-223ENST00000494123 ERASQ7Z444 233 aa9.72□□□□□ -0.85
BRCA1-223ENST00000494123 TIMM17AQ99595 171 aa9.72□□□□□ -0.85
BRCA1-223ENST00000494123 NPSP0C0P6 89 aa9.71□□□□□ -0.85
BRCA1-223ENST00000494123 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.85
BRCA1-223ENST00000494123 TEX43Q6ZNM6 134 aa9.71□□□□□ -0.85
BRCA1-223ENST00000494123 A0A096LNJ9 63 aa9.71□□□□□ -0.86
BRCA1-223ENST00000494123 TRAV13-1A0A0B4J241 112 aa9.71□□□□□ -0.86
BRCA1-223ENST00000494123 LINC00959A0A1B0GUT2 108 aa9.71□□□□□ -0.86
BRCA1-223ENST00000494123 PRSS29PA6NIE9 313 aa9.71□□□□□ -0.86
BRCA1-223ENST00000494123 IFITM10A6NMD0 228 aa9.71□□□□□ -0.86
BRCA1-223ENST00000494123 FAM104AQ969W3 186 aa9.71□□□□□ -0.86
BRCA1-223ENST00000494123 VCX2Q9H322 139 aa9.71□□□□□ -0.86
BRCA1-223ENST00000494123 CHCHD10Q8WYQ3 142 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-223ENST00000494123 C2orf88Q9BSF0 95 aa9.7□□□□□ -0.86
BRCA1-223ENST00000494123 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-223ENST00000494123 CCL25O15444 150 aa9.69□□□□□ -0.86
BRCA1-223ENST00000494123 FAM19A2Q8N3H0 131 aa9.69□□□□□ -0.86
BRCA1-223ENST00000494123 GAGE12HA6NDE8 117 aa9.68□□□□□ -0.86
BRCA1-223ENST00000494123 XCL1P47992 114 aa9.68□□□□□ -0.86
BRCA1-223ENST00000494123 LINC00310P59036 64 aa9.68□□□□□ -0.86
BRCA1-223ENST00000494123 TNP2Q05952 138 aa9.68□□□□□ -0.86
BRCA1-223ENST00000494123 ATP5LO75964 103 aa9.67□□□□□ -0.86
BRCA1-223ENST00000494123 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
BRCA1-223ENST00000494123 EREGO14944 169 aa9.67□□□□□ -0.86
BRCA1-223ENST00000494123 BAALCQ8WXS3 180 aa9.67□□□□□ -0.86
BRCA1-223ENST00000494123 AMELXQ99217 191 aa9.67□□□□□ -0.86
BRCA1-223ENST00000494123 NUPR1O60356 82 aa9.66□□□□□ -0.86
BRCA1-223ENST00000494123 NDUFA6P56556 154 aa9.66□□□□□ -0.86
BRCA1-223ENST00000494123 ZC2HC1BQ5TFG8 222 aa9.66□□□□□ -0.86
BRCA1-223ENST00000494123 KRTAP26-1Q6PEX3 210 aa9.66□□□□□ -0.86
BRCA1-223ENST00000494123 MAPKAPK5-AS1Q8N8E1 139 aa9.66□□□□□ -0.86
BRCA1-223ENST00000494123 DNAH2Q9P225 4427 aa9.66□□□□□ -0.86
BRCA1-223ENST00000494123 A0A087WTM6 91 aa9.65□□□□□ -0.86
BRCA1-223ENST00000494123 LECT2O14960 151 aa9.65□□□□□ -0.86
BRCA1-223ENST00000494123 CD164L2Q6UWJ8 174 aa9.65□□□□□ -0.86
BRCA1-223ENST00000494123 LINC00173Q6ZV60 143 aa9.65□□□□□ -0.86
BRCA1-223ENST00000494123 LEPROTL1O95214 131 aa9.64□□□□□ -0.87
BRCA1-223ENST00000494123 PMVKQ15126 192 aa9.64□□□□□ -0.87
BRCA1-223ENST00000494123 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
BRCA1-223ENST00000494123 UBE2D1P51668 147 aa9.64□□□□□ -0.87
BRCA1-223ENST00000494123 FOXI1Q12951 378 aa9.64□□□□□ -0.87
BRCA1-223ENST00000494123 IFI27L1Q96BM0 104 aa9.63□□□□□ -0.87
BRCA1-223ENST00000494123 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
BRCA1-223ENST00000494123 PRSS1P07477 247 aa9.62□□□□□ -0.87
BRCA1-223ENST00000494123 FABP4P15090 132 aa9.62□□□□□ -0.87
BRCA1-223ENST00000494123 SEC11AP67812 179 aa9.62□□□□□ -0.87
BRCA1-223ENST00000494123 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
BRCA1-223ENST00000494123 LINC00242Q5T6M2 205 aa9.62□□□□□ -0.87
BRCA1-223ENST00000494123 CST9LQ9H4G1 147 aa9.62□□□□□ -0.87
BRCA1-223ENST00000494123 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
BRCA1-223ENST00000494123 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
BRCA1-223ENST00000494123 COX7A2LO14548 114 aa9.61□□□□□ -0.87
BRCA1-223ENST00000494123 MALP21145 153 aa9.61□□□□□ -0.87
BRCA1-223ENST00000494123 WFDC2Q14508 124 aa9.61□□□□□ -0.87
BRCA1-223ENST00000494123 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms