RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CIRBPQ14011 172 aaKnown RBP8.03□□□□□ -1.12
HSPG2-212ENST00000493940 FAM104BQ5XKR9 115 aa8.03□□□□□ -1.12
HSPG2-212ENST00000493940 OR5A1Q8NGJ0 315 aa8.03□□□□□ -1.12
HSPG2-212ENST00000493940 LINC00526Q96FQ7 95 aa8.03□□□□□ -1.12
HSPG2-212ENST00000493940 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
HSPG2-212ENST00000493940 CDC42SE2Q9NRR3 84 aa8.03□□□□□ -1.12
HSPG2-212ENST00000493940 CAMPP49913 170 aa8.02□□□□□ -1.13
HSPG2-212ENST00000493940 FAM104AQ969W3 186 aa8.02□□□□□ -1.13
HSPG2-212ENST00000493940 HMCN2Q8NDA2 5059 aa8.02□□□□□ -1.13
HSPG2-212ENST00000493940 RNASE13Q5GAN3 156 aaKnown RBP8.01□□□□□ -1.13
HSPG2-212ENST00000493940 MRPL54Q6P161 138 aaKnown RBP8.01□□□□□ -1.13
HSPG2-212ENST00000493940 MRPL52Q86TS9 123 aaKnown RBP8.01□□□□□ -1.13
HSPG2-212ENST00000493940 A0A1B0GXF2 115 aa8□□□□□ -1.13
HSPG2-212ENST00000493940 VCYO14598 125 aa8□□□□□ -1.13
HSPG2-212ENST00000493940 CCL25O15444 150 aa8□□□□□ -1.13
HSPG2-212ENST00000493940 ZNF25P17030 456 aaPredicted RBP8□□□□□ -1.13
HSPG2-212ENST00000493940 XCL1P47992 114 aa8□□□□□ -1.13
HSPG2-212ENST00000493940 SUMO2P61956 95 aaKnown RBP8□□□□□ -1.13
HSPG2-212ENST00000493940 PRSS3P2Q8NHM4 247 aa8□□□□□ -1.13
HSPG2-212ENST00000493940 SMDT1Q9H4I9 107 aa8□□□□□ -1.13
HSPG2-212ENST00000493940 A0A087WYN8 130 aa7.99□□□□□ -1.13
HSPG2-212ENST00000493940 RAB14P61106 215 aa7.99□□□□□ -1.13
HSPG2-212ENST00000493940 COX6A2Q02221 97 aa7.99□□□□□ -1.13
HSPG2-212ENST00000493940 SERTAD4-AS1Q5TG53 156 aa7.99□□□□□ -1.13
HSPG2-212ENST00000493940 ZNF664Q8N3J9 261 aa7.99□□□□□ -1.13
HSPG2-212ENST00000493940 UBE2D4Q9Y2X8 147 aa7.99□□□□□ -1.13
HSPG2-212ENST00000493940 TRBV24-1A0A075B6N3 115 aa7.98□□□□□ -1.13
HSPG2-212ENST00000493940 IGHV3-64A0A075B6Q5 118 aa7.98□□□□□ -1.13
HSPG2-212ENST00000493940 GVQW2A0A096LPI5 108 aaPredicted RBP7.98□□□□□ -1.13
HSPG2-212ENST00000493940 C7orf77A4D0Y5 90 aa7.98□□□□□ -1.13
HSPG2-212ENST00000493940 RPL39P62891 51 aaKnown RBP7.98□□□□□ -1.13
HSPG2-212ENST00000493940 IFITM2Q01629 132 aa7.98□□□□□ -1.13
HSPG2-212ENST00000493940 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
HSPG2-212ENST00000493940 TMEM101Q96IK0 257 aa7.98□□□□□ -1.13
HSPG2-212ENST00000493940 TNFRSF6BO95407 300 aa7.97□□□□□ -1.13
HSPG2-212ENST00000493940 NPYP01303 97 aa7.97□□□□□ -1.13
HSPG2-212ENST00000493940 RPL37AP61513 92 aaKnown RBP7.97□□□□□ -1.13
HSPG2-212ENST00000493940 BTF3L4Q96K17 158 aa7.97□□□□□ -1.13
HSPG2-212ENST00000493940 OPRPNQ99935 248 aaPredicted RBP7.97□□□□□ -1.13
HSPG2-212ENST00000493940 AP5S1Q9NUS5 200 aa7.97□□□□□ -1.13
HSPG2-212ENST00000493940 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
HSPG2-212ENST00000493940 D6R8Y8 96 aa7.96□□□□□ -1.14
HSPG2-212ENST00000493940 FCER1GP30273 86 aa7.96□□□□□ -1.14
HSPG2-212ENST00000493940 CKS2P33552 79 aa7.96□□□□□ -1.14
HSPG2-212ENST00000493940 CFAP161Q6P656 301 aa7.96□□□□□ -1.14
HSPG2-212ENST00000493940 Q6ZUT4 128 aa7.96□□□□□ -1.14
HSPG2-212ENST00000493940 TNXBP22105 4242 aa7.95□□□□□ -1.14
HSPG2-212ENST00000493940 A0A096LNI7 61 aa7.95□□□□□ -1.14
HSPG2-212ENST00000493940 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
HSPG2-212ENST00000493940 LINC00862A6NCI5 91 aa7.95□□□□□ -1.14
HSPG2-212ENST00000493940 TCAPO15273 167 aa7.95□□□□□ -1.14
HSPG2-212ENST00000493940 CD164L2Q6UWJ8 174 aa7.95□□□□□ -1.14
HSPG2-212ENST00000493940 C20orf78Q9BR46 151 aa7.95□□□□□ -1.14
HSPG2-212ENST00000493940 PLAC8Q9NZF1 115 aa7.95□□□□□ -1.14
HSPG2-212ENST00000493940 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
HSPG2-212ENST00000493940 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
HSPG2-212ENST00000493940 A0A1B0GW15 77 aa7.94□□□□□ -1.14
HSPG2-212ENST00000493940 RPL32P62910 135 aaKnown RBP7.94□□□□□ -1.14
HSPG2-212ENST00000493940 HBBP68871 147 aa7.94□□□□□ -1.14
HSPG2-212ENST00000493940 SS18Q15532 418 aa7.94□□□□□ -1.14
HSPG2-212ENST00000493940 SMIM2Q9BVW6 85 aa7.94□□□□□ -1.14
HSPG2-212ENST00000493940 TRAV13-1A0A0B4J241 112 aa7.93□□□□□ -1.14
HSPG2-212ENST00000493940 IGHV1-58A0A0C4DH39 117 aa7.93□□□□□ -1.14
HSPG2-212ENST00000493940 PPP1R2P9O14990 202 aa7.93□□□□□ -1.14
HSPG2-212ENST00000493940 PPP1R17O96001 155 aa7.93□□□□□ -1.14
HSPG2-212ENST00000493940 CLLU1Q5K131 121 aa7.93□□□□□ -1.14
HSPG2-212ENST00000493940 DPH3Q96FX2 82 aa7.93□□□□□ -1.14
HSPG2-212ENST00000493940 KIR2DL4Q99706 377 aa7.93□□□□□ -1.14
HSPG2-212ENST00000493940 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
HSPG2-212ENST00000493940 ADCYAP1P18509 176 aa7.92□□□□□ -1.14
HSPG2-212ENST00000493940 MAJINQ3KP22 176 aa7.92□□□□□ -1.14
HSPG2-212ENST00000493940 C5orf38Q86SI9 138 aa7.92□□□□□ -1.14
HSPG2-212ENST00000493940 IGLV4-69A0A075B6H9 119 aa7.91□□□□□ -1.14
HSPG2-212ENST00000493940 PHOX2AO14813 284 aa7.91□□□□□ -1.14
HSPG2-212ENST00000493940 OXTP01178 125 aa7.91□□□□□ -1.14
HSPG2-212ENST00000493940 C1orf196B1AJZ1 125 aa7.9□□□□□ -1.14
HSPG2-212ENST00000493940 F8W036 122 aa7.9□□□□□ -1.14
HSPG2-212ENST00000493940 MT1HL1P0DM35 61 aa7.9□□□□□ -1.14
HSPG2-212ENST00000493940 TMEM136Q6ZRR5 245 aa7.9□□□□□ -1.14
HSPG2-212ENST00000493940 Q6ZRU5 148 aa7.9□□□□□ -1.14
HSPG2-212ENST00000493940 STPG4Q8N801 248 aa7.9□□□□□ -1.14
HSPG2-212ENST00000493940 PRELID3AQ96N28 172 aa7.9□□□□□ -1.14
HSPG2-212ENST00000493940 SYCNQ0VAF6 134 aa7.89□□□□□ -1.15
HSPG2-212ENST00000493940 ZC2HC1BQ5TFG8 222 aa7.89□□□□□ -1.15
HSPG2-212ENST00000493940 ATP5L2Q7Z4Y8 100 aa7.89□□□□□ -1.15
HSPG2-212ENST00000493940 CARD19Q96LW7 228 aa7.89□□□□□ -1.15
HSPG2-212ENST00000493940 IGHV3OR16-9A0A0B4J2B5 98 aa7.88□□□□□ -1.15
HSPG2-212ENST00000493940 A0A0J9YXV3 536 aa7.88□□□□□ -1.15
HSPG2-212ENST00000493940 LOC389332A0A1B0GUA5 103 aa7.88□□□□□ -1.15
HSPG2-212ENST00000493940 PRSS47A8MTI9 375 aa7.88□□□□□ -1.15
HSPG2-212ENST00000493940 COX7A2LO14548 114 aa7.88□□□□□ -1.15
HSPG2-212ENST00000493940 S100A8P05109 93 aa7.88□□□□□ -1.15
HSPG2-212ENST00000493940 ORMDL3Q8N138 153 aa7.88□□□□□ -1.15
HSPG2-212ENST00000493940 PLA2G2DQ9UNK4 145 aa7.88□□□□□ -1.15
HSPG2-212ENST00000493940 A0A1W2PNN7 141 aa7.87□□□□□ -1.15
HSPG2-212ENST00000493940 ZNF561-AS1K7EIQ3 104 aa7.87□□□□□ -1.15
HSPG2-212ENST00000493940 PPBPP02775 128 aa7.87□□□□□ -1.15
HSPG2-212ENST00000493940 PNRC1Q12796 327 aaPredicted RBP7.87□□□□□ -1.15
HSPG2-212ENST00000493940 ANAPC16Q96DE5 110 aa7.87□□□□□ -1.15
HSPG2-212ENST00000493940 MT-ND4LP03901 98 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms