RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.93
ATG4B-223ENST00000493618 CCL25O15444 150 aa9.27□□□□□ -0.93
ATG4B-223ENST00000493618 MAJINQ3KP22 176 aa9.27□□□□□ -0.93
ATG4B-223ENST00000493618 MRAP2Q96G30 205 aa9.27□□□□□ -0.93
ATG4B-223ENST00000493618 V9GYV3 84 aa9.27□□□□□ -0.93
ATG4B-223ENST00000493618 A0A1B0GVG6 124 aa9.26□□□□□ -0.93
ATG4B-223ENST00000493618 PHOX2AO14813 284 aa9.26□□□□□ -0.93
ATG4B-223ENST00000493618 POLR2KP53803 58 aaKnown RBP9.26□□□□□ -0.93
ATG4B-223ENST00000493618 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
ATG4B-223ENST00000493618 NUP35Q8NFH5 326 aa9.26□□□□□ -0.93
ATG4B-223ENST00000493618 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
ATG4B-223ENST00000493618 NDUFS6O75380 124 aaKnown RBP9.25□□□□□ -0.93
ATG4B-223ENST00000493618 RIGQ13278 110 aa9.25□□□□□ -0.93
ATG4B-223ENST00000493618 ISOC2Q96AB3 205 aa9.25□□□□□ -0.93
ATG4B-223ENST00000493618 UBR4Q5T4S7 5183 aa9.24□□□□□ -0.93
ATG4B-223ENST00000493618 A0A096LNI7 61 aa9.24□□□□□ -0.93
ATG4B-223ENST00000493618 TRBV27A0A0K0K1C4 114 aa9.24□□□□□ -0.93
ATG4B-223ENST00000493618 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
ATG4B-223ENST00000493618 SS18Q15532 418 aa9.24□□□□□ -0.93
ATG4B-223ENST00000493618 ADIRFQ15847 76 aa9.24□□□□□ -0.93
ATG4B-223ENST00000493618 TMEM241Q24JQ0 296 aa9.24□□□□□ -0.93
ATG4B-223ENST00000493618 CDC42SE2Q9NRR3 84 aa9.24□□□□□ -0.93
ATG4B-223ENST00000493618 C7orf77A4D0Y5 90 aa9.23□□□□□ -0.93
ATG4B-223ENST00000493618 C9JQL5 133 aa9.23□□□□□ -0.93
ATG4B-223ENST00000493618 FCER1GP30273 86 aa9.23□□□□□ -0.93
ATG4B-223ENST00000493618 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
ATG4B-223ENST00000493618 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
ATG4B-223ENST00000493618 ZNF664Q8N3J9 261 aa9.23□□□□□ -0.93
ATG4B-223ENST00000493618 STPG4Q8N801 248 aa9.23□□□□□ -0.93
ATG4B-223ENST00000493618 NRACQ8N912 160 aa9.23□□□□□ -0.93
ATG4B-223ENST00000493618 IGHV1-58A0A0C4DH39 117 aa9.22□□□□□ -0.93
ATG4B-223ENST00000493618 C7orf33Q8WU49 177 aa9.22□□□□□ -0.93
ATG4B-223ENST00000493618 PLA2G2DQ9UNK4 145 aa9.22□□□□□ -0.93
ATG4B-223ENST00000493618 VCYO14598 125 aa9.21□□□□□ -0.94
ATG4B-223ENST00000493618 MT1HL1P0DM35 61 aa9.21□□□□□ -0.94
ATG4B-223ENST00000493618 SRSF3P84103 164 aaKnown RBP9.21□□□□□ -0.94
ATG4B-223ENST00000493618 MRPL51Q4U2R6 128 aaKnown RBP9.21□□□□□ -0.94
ATG4B-223ENST00000493618 Q6ZRU5 148 aa9.21□□□□□ -0.94
ATG4B-223ENST00000493618 CARD19Q96LW7 228 aa9.21□□□□□ -0.94
ATG4B-223ENST00000493618 NAT8BQ9UHF3 227 aa9.21□□□□□ -0.94
ATG4B-223ENST00000493618 CAMPP49913 170 aa9.2□□□□□ -0.94
ATG4B-223ENST00000493618 SUMO2P61956 95 aaKnown RBP9.2□□□□□ -0.94
ATG4B-223ENST00000493618 FAM74A3Q4VXF1 159 aa9.2□□□□□ -0.94
ATG4B-223ENST00000493618 CD164L2Q6UWJ8 174 aa9.2□□□□□ -0.94
ATG4B-223ENST00000493618 NAT8Q9UHE5 227 aa9.2□□□□□ -0.94
ATG4B-223ENST00000493618 ZNF561-AS1K7EIQ3 104 aa9.19□□□□□ -0.94
ATG4B-223ENST00000493618 UBE2D4Q9Y2X8 147 aa9.19□□□□□ -0.94
ATG4B-223ENST00000493618 SMIM27A0A1W2PRY6 76 aa9.18□□□□□ -0.94
ATG4B-223ENST00000493618 SYCNQ0VAF6 134 aa9.18□□□□□ -0.94
ATG4B-223ENST00000493618 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
ATG4B-223ENST00000493618 KIR2DL4Q99706 377 aa9.18□□□□□ -0.94
ATG4B-223ENST00000493618 TNXBP22105 4242 aa9.18□□□□□ -0.94
ATG4B-223ENST00000493618 IGLV4-69A0A075B6H9 119 aa9.17□□□□□ -0.94
ATG4B-223ENST00000493618 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
ATG4B-223ENST00000493618 PPP1R17O96001 155 aa9.17□□□□□ -0.94
ATG4B-223ENST00000493618 MALP21145 153 aa9.17□□□□□ -0.94
ATG4B-223ENST00000493618 PRR3P79522 188 aaKnown RBP9.17□□□□□ -0.94
ATG4B-223ENST00000493618 Q6ZUT4 128 aa9.17□□□□□ -0.94
ATG4B-223ENST00000493618 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
ATG4B-223ENST00000493618 COX7A2LO14548 114 aa9.16□□□□□ -0.94
ATG4B-223ENST00000493618 PPP1R2P9O14990 202 aa9.16□□□□□ -0.94
ATG4B-223ENST00000493618 CKS2P33552 79 aa9.16□□□□□ -0.94
ATG4B-223ENST00000493618 PEA15Q15121 130 aa9.16□□□□□ -0.94
ATG4B-223ENST00000493618 MRPL54Q6P161 138 aaKnown RBP9.16□□□□□ -0.94
ATG4B-223ENST00000493618 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
ATG4B-223ENST00000493618 GAGE2BQ13066 116 aa9.15□□□□□ -0.94
ATG4B-223ENST00000493618 C5orf38Q86SI9 138 aa9.15□□□□□ -0.94
ATG4B-223ENST00000493618 TNFRSF6BO95407 300 aa9.14□□□□□ -0.95
ATG4B-223ENST00000493618 SMAGPQ0VAQ4 97 aa9.14□□□□□ -0.95
ATG4B-223ENST00000493618 LINC00474Q9P2X8 69 aa9.14□□□□□ -0.95
ATG4B-223ENST00000493618 CSDC2Q9Y534 153 aaKnown RBP9.14□□□□□ -0.95
ATG4B-223ENST00000493618 D6R8Y8 96 aa9.13□□□□□ -0.95
ATG4B-223ENST00000493618 NPYP01303 97 aa9.13□□□□□ -0.95
ATG4B-223ENST00000493618 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
ATG4B-223ENST00000493618 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
ATG4B-223ENST00000493618 CAMK2N2Q96S95 79 aa9.13□□□□□ -0.95
ATG4B-223ENST00000493618 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
ATG4B-223ENST00000493618 C20orf78Q9BR46 151 aa9.13□□□□□ -0.95
ATG4B-223ENST00000493618 PKIGQ9Y2B9 76 aa9.13□□□□□ -0.95
ATG4B-223ENST00000493618 LOC107984640A0A0U1RRK4 108 aa9.12□□□□□ -0.95
ATG4B-223ENST00000493618 A0A1B0GW15 77 aa9.12□□□□□ -0.95
ATG4B-223ENST00000493618 LINC00862A6NCI5 91 aa9.12□□□□□ -0.95
ATG4B-223ENST00000493618 ODF1Q14990 250 aa9.12□□□□□ -0.95
ATG4B-223ENST00000493618 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
ATG4B-223ENST00000493618 SMIM2Q9BVW6 85 aa9.12□□□□□ -0.95
ATG4B-223ENST00000493618 TRBV24-1A0A075B6N3 115 aa9.11□□□□□ -0.95
ATG4B-223ENST00000493618 A0A0J9YXV3 536 aa9.11□□□□□ -0.95
ATG4B-223ENST00000493618 TCAPO15273 167 aa9.11□□□□□ -0.95
ATG4B-223ENST00000493618 HBBP68871 147 aa9.11□□□□□ -0.95
ATG4B-223ENST00000493618 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
ATG4B-223ENST00000493618 A0A1B0GXF2 115 aa9.1□□□□□ -0.95
ATG4B-223ENST00000493618 F8W036 122 aa9.1□□□□□ -0.95
ATG4B-223ENST00000493618 RPL32P62910 135 aaKnown RBP9.1□□□□□ -0.95
ATG4B-223ENST00000493618 RPL18AQ02543 176 aaKnown RBP9.1□□□□□ -0.95
ATG4B-223ENST00000493618 SPAG11BQ08648 103 aa9.1□□□□□ -0.95
ATG4B-223ENST00000493618 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
ATG4B-223ENST00000493618 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.09□□□□□ -0.95
ATG4B-223ENST00000493618 APOMO95445 188 aa9.09□□□□□ -0.95
ATG4B-223ENST00000493618 S100A8P05109 93 aa9.09□□□□□ -0.95
ATG4B-223ENST00000493618 SMDT1Q9H4I9 107 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms