RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
NUP50-218ENST00000493456 FAT4Q6V0I7 4981 aa10.75□□□□□ -0.69
NUP50-218ENST00000493456 BCL2P10415 239 aa10.74□□□□□ -0.69
NUP50-218ENST00000493456 PMCHP20382 165 aa10.74□□□□□ -0.69
NUP50-218ENST00000493456 MRAP2Q96G30 205 aa10.74□□□□□ -0.69
NUP50-218ENST00000493456 TRBV20OR9-2A0A075B6H5 130 aa10.73□□□□□ -0.69
NUP50-218ENST00000493456 PDE6DO43924 150 aa10.73□□□□□ -0.69
NUP50-218ENST00000493456 ESDP10768 282 aa10.73□□□□□ -0.69
NUP50-218ENST00000493456 MALP21145 153 aa10.73□□□□□ -0.69
NUP50-218ENST00000493456 MRPL52Q86TS9 123 aaKnown RBP10.73□□□□□ -0.69
NUP50-218ENST00000493456 NUDT10Q8NFP7 164 aa10.73□□□□□ -0.69
NUP50-218ENST00000493456 NUDT11Q96G61 164 aa10.73□□□□□ -0.69
NUP50-218ENST00000493456 CDC42SE2Q9NRR3 84 aa10.73□□□□□ -0.69
NUP50-218ENST00000493456 TRAV1-1A0A0B4J248 108 aa10.72□□□□□ -0.69
NUP50-218ENST00000493456 TRBV6-5A0A0K0K1A5 114 aa10.72□□□□□ -0.69
NUP50-218ENST00000493456 MEF2BQ02080 365 aaPredicted RBP10.72□□□□□ -0.69
NUP50-218ENST00000493456 CAMK2N2Q96S95 79 aa10.72□□□□□ -0.69
NUP50-218ENST00000493456 RPP21Q9H633 154 aaKnown RBP10.72□□□□□ -0.69
NUP50-218ENST00000493456 IGLV1-50A0A075B6I6 118 aa10.71□□□□□ -0.69
NUP50-218ENST00000493456 KANTRA0A1W2PQU2 76 aa10.71□□□□□ -0.69
NUP50-218ENST00000493456 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.71□□□□□ -0.69
NUP50-218ENST00000493456 COX7A2LO14548 114 aa10.71□□□□□ -0.69
NUP50-218ENST00000493456 BCL2L11O43521 198 aa10.71□□□□□ -0.69
NUP50-218ENST00000493456 IGLV7-43P04211 117 aa10.71□□□□□ -0.69
NUP50-218ENST00000493456 RPL18AQ02543 176 aaKnown RBP10.71□□□□□ -0.69
NUP50-218ENST00000493456 PHF5AQ7RTV0 110 aaKnown RBP10.71□□□□□ -0.69
NUP50-218ENST00000493456 C2orf48Q96LS8 159 aa10.71□□□□□ -0.69
NUP50-218ENST00000493456 C1orf196B1AJZ1 125 aa10.7□□□□□ -0.7
NUP50-218ENST00000493456 H0Y9J4 135 aa10.7□□□□□ -0.7
NUP50-218ENST00000493456 TEX46H3BTG2 121 aa10.7□□□□□ -0.7
NUP50-218ENST00000493456 TSHBP01222 138 aa10.7□□□□□ -0.7
NUP50-218ENST00000493456 TSKUQ8WUA8 353 aa10.7□□□□□ -0.7
NUP50-218ENST00000493456 MED9Q9NWA0 146 aa10.7□□□□□ -0.7
NUP50-218ENST00000493456 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
NUP50-218ENST00000493456 FOXA3P55318 350 aaPredicted RBP10.69□□□□□ -0.7
NUP50-218ENST00000493456 TMEM242Q9NWH2 141 aa10.69□□□□□ -0.7
NUP50-218ENST00000493456 HMSDA8MTL9 139 aa10.68□□□□□ -0.7
NUP50-218ENST00000493456 PRR4Q16378 134 aa10.68□□□□□ -0.7
NUP50-218ENST00000493456 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
NUP50-218ENST00000493456 C7orf77A4D0Y5 90 aa10.67□□□□□ -0.7
NUP50-218ENST00000493456 RNF151Q2KHN1 245 aa10.67□□□□□ -0.7
NUP50-218ENST00000493456 RNASE7Q9H1E1 156 aaKnown RBP10.67□□□□□ -0.7
NUP50-218ENST00000493456 KRTAP9-6A0A140TA67 174 aa10.66□□□□□ -0.7
NUP50-218ENST00000493456 A0A087WZ39 114 aa10.65□□□□□ -0.7
NUP50-218ENST00000493456 TRBV27A0A0K0K1C4 114 aa10.65□□□□□ -0.7
NUP50-218ENST00000493456 SMAGPQ0VAQ4 97 aa10.65□□□□□ -0.7
NUP50-218ENST00000493456 CSDC2Q9Y534 153 aaKnown RBP10.65□□□□□ -0.7
NUP50-218ENST00000493456 RPL13AP40429 203 aaKnown RBP10.64□□□□□ -0.71
NUP50-218ENST00000493456 UBE2D1P51668 147 aa10.64□□□□□ -0.71
NUP50-218ENST00000493456 SPAG11BQ08648 103 aa10.64□□□□□ -0.71
NUP50-218ENST00000493456 OPRPNQ99935 248 aaPredicted RBP10.64□□□□□ -0.71
NUP50-218ENST00000493456 K7EN84 100 aa10.63□□□□□ -0.71
NUP50-218ENST00000493456 KRTAP1-4P0C5Y4 121 aa10.63□□□□□ -0.71
NUP50-218ENST00000493456 POLR2KP53803 58 aaKnown RBP10.63□□□□□ -0.71
NUP50-218ENST00000493456 OR10D4PQ8NGN7 298 aa10.62□□□□□ -0.71
NUP50-218ENST00000493456 IMMP2LQ96T52 175 aa10.62□□□□□ -0.71
NUP50-218ENST00000493456 MRPL35Q9NZE8 188 aaKnown RBP10.62□□□□□ -0.71
NUP50-218ENST00000493456 TRAV13-1A0A0B4J241 112 aa10.61□□□□□ -0.71
NUP50-218ENST00000493456 F8WDY8 70 aa10.61□□□□□ -0.71
NUP50-218ENST00000493456 C5orf38Q86SI9 138 aa10.61□□□□□ -0.71
NUP50-218ENST00000493456 OCC1Q8TAD7 63 aa10.61□□□□□ -0.71
NUP50-218ENST00000493456 A8MWL6 223 aa10.6□□□□□ -0.71
NUP50-218ENST00000493456 TAGLN2P37802 199 aaKnown RBP10.6□□□□□ -0.71
NUP50-218ENST00000493456 BORCS7Q96B45 105 aa10.6□□□□□ -0.71
NUP50-218ENST00000493456 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
NUP50-218ENST00000493456 GATCO43716 136 aaKnown RBP10.59□□□□□ -0.71
NUP50-218ENST00000493456 FCER1GP30273 86 aa10.59□□□□□ -0.71
NUP50-218ENST00000493456 KRTAP11-1Q8IUC1 163 aa10.59□□□□□ -0.71
NUP50-218ENST00000493456 FAM168BA1KXE4 195 aa10.58□□□□□ -0.72
NUP50-218ENST00000493456 TLX1NBP0CAT3 122 aa10.58□□□□□ -0.72
NUP50-218ENST00000493456 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
NUP50-218ENST00000493456 LCE2AQ5TA79 106 aaPredicted RBP10.58□□□□□ -0.72
NUP50-218ENST00000493456 TMEM191AQ9H0A3 160 aa10.58□□□□□ -0.72
NUP50-218ENST00000493456 CARHSP1Q9Y2V2 147 aaKnown RBP10.58□□□□□ -0.72
NUP50-218ENST00000493456 VCYO14598 125 aa10.57□□□□□ -0.72
NUP50-218ENST00000493456 NDUFA1O15239 70 aa10.57□□□□□ -0.72
NUP50-218ENST00000493456 RGS21Q2M5E4 152 aa10.57□□□□□ -0.72
NUP50-218ENST00000493456 CT83Q5H943 113 aa10.57□□□□□ -0.72
NUP50-218ENST00000493456 FAM231DQ6ZW35 169 aa10.57□□□□□ -0.72
NUP50-218ENST00000493456 FAM19A5Q7Z5A7 132 aaPredicted RBP10.57□□□□□ -0.72
NUP50-218ENST00000493456 ORAOV1Q8WV07 137 aa10.56□□□□□ -0.72
NUP50-218ENST00000493456 A0A1B0GUT8 65 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 PPP1R17O96001 155 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 RAB4AP20338 218 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 TMEM241Q24JQ0 296 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 Q6ZUT4 128 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 TMEM18Q96B42 140 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 KIR2DL4Q99706 377 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 TIMM21Q9BVV7 248 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 BATF3Q9NR55 127 aa10.55□□□□□ -0.72
NUP50-218ENST00000493456 UBE2BP63146 152 aa10.54□□□□□ -0.72
NUP50-218ENST00000493456 M0QXV9 152 aa10.53□□□□□ -0.72
NUP50-218ENST00000493456 SUMO2P61956 95 aaKnown RBP10.53□□□□□ -0.72
NUP50-218ENST00000493456 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
NUP50-218ENST00000493456 SMDT1Q9H4I9 107 aa10.53□□□□□ -0.72
NUP50-218ENST00000493456 C10orf25Q5T742 122 aa10.52□□□□□ -0.73
NUP50-218ENST00000493456 IGHV3OR16-9A0A0B4J2B5 98 aa10.51□□□□□ -0.73
NUP50-218ENST00000493456 HIGD1CA8MV81 97 aa10.51□□□□□ -0.73
NUP50-218ENST00000493456 PPP1R2P9O14990 202 aa10.51□□□□□ -0.73
NUP50-218ENST00000493456 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms