RNA–Protein interactions for RNA: ENST00000489697.1

RAI1-204, Transcript of retinoic acid induced 1, humanhuman

TSL 3

Gene RAI1, Length 1,570 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-204ENST00000489697 PRR34Q9NV39 138 aa10.69□□□□□ -0.7
RAI1-204ENST00000489697 CSDC2Q9Y534 153 aaKnown RBP10.69□□□□□ -0.7
RAI1-204ENST00000489697 REG3AQ06141 175 aa10.68□□□□□ -0.7
RAI1-204ENST00000489697 ZNF664Q8N3J9 261 aa10.68□□□□□ -0.7
RAI1-204ENST00000489697 SPANXA1Q9NS26 97 aa10.68□□□□□ -0.7
RAI1-204ENST00000489697 IGKV3OR2-268A0A0C4DH90 116 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BKO60814 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BJP06899 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BOP23527 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BBP33778 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BDP58876 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BCP62807 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST2H2BEQ16778 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.67□□□□□ -0.7
RAI1-204ENST00000489697 NFE4Q86UQ8 179 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BHQ93079 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 TOMM6Q96B49 74 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BNQ99877 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 HIST1H2BMQ99879 126 aa10.67□□□□□ -0.7
RAI1-204ENST00000489697 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
RAI1-204ENST00000489697 RNASE13Q5GAN3 156 aaKnown RBP10.66□□□□□ -0.7
RAI1-204ENST00000489697 Q6ZUT4 128 aa10.66□□□□□ -0.7
RAI1-204ENST00000489697 CHCHD1Q96BP2 118 aaKnown RBP10.66□□□□□ -0.7
RAI1-204ENST00000489697 OPRPNQ99935 248 aaPredicted RBP10.66□□□□□ -0.7
RAI1-204ENST00000489697 PYGO1Q9Y3Y4 419 aa10.66□□□□□ -0.7
RAI1-204ENST00000489697 RTL8CO15255 209 aa10.65□□□□□ -0.7
RAI1-204ENST00000489697 MIAQ16674 131 aa10.65□□□□□ -0.7
RAI1-204ENST00000489697 FAM104AQ969W3 186 aa10.65□□□□□ -0.7
RAI1-204ENST00000489697 FAT2Q9NYQ8 4349 aa10.65□□□□□ -0.7
RAI1-204ENST00000489697 IGKV2D-24A0A075B6R9 120 aa10.65□□□□□ -0.71
RAI1-204ENST00000489697 A0A096LNJ9 63 aa10.65□□□□□ -0.71
RAI1-204ENST00000489697 C1orf196B1AJZ1 125 aa10.65□□□□□ -0.71
RAI1-204ENST00000489697 MRPS36P82909 103 aaKnown RBP10.65□□□□□ -0.71
RAI1-204ENST00000489697 Q6ZRN7 208 aaPredicted RBP10.65□□□□□ -0.71
RAI1-204ENST00000489697 IGLV10-54A0A075B6I4 117 aa10.64□□□□□ -0.71
RAI1-204ENST00000489697 IGIPA6NJ69 53 aa10.64□□□□□ -0.71
RAI1-204ENST00000489697 SERF1AO75920 110 aa10.64□□□□□ -0.71
RAI1-204ENST00000489697 HBDP02042 147 aa10.64□□□□□ -0.71
RAI1-204ENST00000489697 LINC00310P59036 64 aa10.64□□□□□ -0.71
RAI1-204ENST00000489697 RMI2Q96E14 147 aa10.64□□□□□ -0.71
RAI1-204ENST00000489697 C1orf43Q9BWL3 253 aa10.64□□□□□ -0.71
RAI1-204ENST00000489697 IGLV4-3A0A075B6K6 122 aa10.63□□□□□ -0.71
RAI1-204ENST00000489697 LINC01549A6NIU2 74 aa10.63□□□□□ -0.71
RAI1-204ENST00000489697 HSBP1O75506 76 aa10.63□□□□□ -0.71
RAI1-204ENST00000489697 SCGB3A1Q96QR1 104 aa10.63□□□□□ -0.71
RAI1-204ENST00000489697 TM2D2Q9BX73 214 aa10.63□□□□□ -0.71
RAI1-204ENST00000489697 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
RAI1-204ENST00000489697 TIMM17AQ99595 171 aa10.62□□□□□ -0.71
RAI1-204ENST00000489697 TRAV8-4A0A0B4J246 113 aa10.61□□□□□ -0.71
RAI1-204ENST00000489697 PSCAO43653 123 aa10.61□□□□□ -0.71
RAI1-204ENST00000489697 ERASQ7Z444 233 aa10.61□□□□□ -0.71
RAI1-204ENST00000489697 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
RAI1-204ENST00000489697 LINC00959A0A1B0GUT2 108 aa10.6□□□□□ -0.71
RAI1-204ENST00000489697 NUPR1O60356 82 aa10.6□□□□□ -0.71
RAI1-204ENST00000489697 Q6ZN92 141 aa10.6□□□□□ -0.71
RAI1-204ENST00000489697 FAM19A2Q8N3H0 131 aa10.6□□□□□ -0.71
RAI1-204ENST00000489697 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
RAI1-204ENST00000489697 NPSP0C0P6 89 aa10.6□□□□□ -0.71
RAI1-204ENST00000489697 ZC2HC1BQ5TFG8 222 aa10.6□□□□□ -0.71
RAI1-204ENST00000489697 IFITM10A6NMD0 228 aa10.59□□□□□ -0.71
RAI1-204ENST00000489697 SS18Q15532 418 aa10.59□□□□□ -0.71
RAI1-204ENST00000489697 PDZD11Q5EBL8 140 aa10.59□□□□□ -0.71
RAI1-204ENST00000489697 KRTAP26-1Q6PEX3 210 aa10.59□□□□□ -0.71
RAI1-204ENST00000489697 TEX43Q6ZNM6 134 aa10.59□□□□□ -0.71
RAI1-204ENST00000489697 CHCHD10Q8WYQ3 142 aaPredicted RBP10.59□□□□□ -0.71
RAI1-204ENST00000489697 VCX2Q9H322 139 aa10.59□□□□□ -0.71
RAI1-204ENST00000489697 DNAH11Q96DT5 4516 aa10.58□□□□□ -0.72
RAI1-204ENST00000489697 TNP2Q05952 138 aa10.58□□□□□ -0.72
RAI1-204ENST00000489697 PAPPA-AS1Q5QFB9 102 aa10.58□□□□□ -0.72
RAI1-204ENST00000489697 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
RAI1-204ENST00000489697 AMELXQ99217 191 aa10.58□□□□□ -0.72
RAI1-204ENST00000489697 PRSS29PA6NIE9 313 aa10.57□□□□□ -0.72
RAI1-204ENST00000489697 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.57□□□□□ -0.72
RAI1-204ENST00000489697 CCL25O15444 150 aa10.57□□□□□ -0.72
RAI1-204ENST00000489697 XCL1P47992 114 aa10.57□□□□□ -0.72
RAI1-204ENST00000489697 NDUFA6P56556 154 aa10.57□□□□□ -0.72
RAI1-204ENST00000489697 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
RAI1-204ENST00000489697 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
RAI1-204ENST00000489697 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
RAI1-204ENST00000489697 C2orf88Q9BSF0 95 aa10.56□□□□□ -0.72
RAI1-204ENST00000489697 TMA7Q9Y2S6 64 aaKnown RBP10.56□□□□□ -0.72
RAI1-204ENST00000489697 ATP5LO75964 103 aa10.56□□□□□ -0.72
RAI1-204ENST00000489697 BAALCQ8WXS3 180 aa10.56□□□□□ -0.72
RAI1-204ENST00000489697 COA6Q5JTJ3 125 aaKnown RBP10.55□□□□□ -0.72
RAI1-204ENST00000489697 UBE2D1P51668 147 aa10.54□□□□□ -0.72
RAI1-204ENST00000489697 A0A087WTM6 91 aa10.53□□□□□ -0.72
RAI1-204ENST00000489697 LRCOL1A6NCL2 159 aa10.53□□□□□ -0.72
RAI1-204ENST00000489697 LECT2O14960 151 aa10.53□□□□□ -0.72
RAI1-204ENST00000489697 LEPROTL1O95214 131 aa10.53□□□□□ -0.72
RAI1-204ENST00000489697 FOXI1Q12951 378 aa10.53□□□□□ -0.72
RAI1-204ENST00000489697 PMVKQ15126 192 aa10.53□□□□□ -0.72
RAI1-204ENST00000489697 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
RAI1-204ENST00000489697 PKD1P98161 4303 aa10.52□□□□□ -0.72
RAI1-204ENST00000489697 WFDC2Q14508 124 aa10.52□□□□□ -0.72
RAI1-204ENST00000489697 IFI27L1Q96BM0 104 aa10.52□□□□□ -0.72
RAI1-204ENST00000489697 CST9LQ9H4G1 147 aa10.52□□□□□ -0.72
RAI1-204ENST00000489697 FABP4P15090 132 aa10.52□□□□□ -0.73
RAI1-204ENST00000489697 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.73
RAI1-204ENST00000489697 PRSS1P07477 247 aa10.51□□□□□ -0.73
RAI1-204ENST00000489697 COX6A2Q02221 97 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms