RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 DKK2Q9UBU2 259 aa4.56□□□□□ -1.68
SF3A3-208ENST00000489537 TRBV25-1A0A075B6N4 114 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 MYMXA0A1B0GTQ4 84 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 C9orf118A6NHY6 69 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 SPART-AS1P0CW21 52 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 UBE2D3P61077 147 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 UBE2D2P62837 147 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 Q6ZTI0 123 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 STPG4Q8N801 248 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 AMELXQ99217 191 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 TMEM243Q9BU79 118 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 PRO0255Q9UI72 69 aa4.55□□□□□ -1.68
SF3A3-208ENST00000489537 MUC4Q99102 2169 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 AGRNO00468 2067 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 IGLV4-3A0A075B6K6 122 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 TRAV26-1A0A087WT03 109 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 IGHV3-73A0A0B4J1V6 119 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 TINCRA0A1B0GVN0 87 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 GAGE12BA1L429 117 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 GAGE7O76087 117 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 GAGE12FP0CL80 117 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 GAGE12GP0CL81 117 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 GAGE12IP0CL82 117 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 LGALS3P17931 250 aaKnown RBP4.54□□□□□ -1.68
SF3A3-208ENST00000489537 TIRAPP58753 221 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 HERVK_113P63121 156 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 EGFEM1PQ0D2K5 195 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 BATFQ16520 125 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 MAJINQ3KP22 176 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 TMEM170BQ5T4T1 132 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 AMMECR1LQ6DCA0 310 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 SFTA2Q6UW10 78 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 Q6ZVH6 145 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 SLC25A29Q8N8R3 303 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 OR5A1Q8NGJ0 315 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 RNF183Q96D59 192 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 ZNF479Q96JC4 524 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 CHAC1Q9BUX1 264 aa4.54□□□□□ -1.68
SF3A3-208ENST00000489537 GEMIN7Q9H840 131 aaKnown RBP4.54□□□□□ -1.68
SF3A3-208ENST00000489537 KMT2CQ8NEZ4 4911 aaKnown RBP4.54□□□□□ -1.68
SF3A3-208ENST00000489537 TRAV8-6A0A0B4J262 113 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 PLAC8L1A1L4L8 177 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 LEPROTO15243 131 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 ATP5G1P05496 136 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 P0DMU3 169 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 FAM231AP0DMU4 169 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 FAM231CP0DMU5 169 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 FGF6P10767 208 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 DAD1P61803 113 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 RPL39P62891 51 aaKnown RBP4.53□□□□□ -1.68
SF3A3-208ENST00000489537 BVES-AS1Q5T3Y7 98 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 SCGB1D4Q6XE38 83 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 NEGR1Q7Z3B1 354 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 FAM19A3Q7Z5A8 133 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 ORAOV1Q8WV07 137 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 CHCHD7Q9BUK0 85 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 RYR3Q15413 4870 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 SORL1Q92673 2214 aa4.53□□□□□ -1.68
SF3A3-208ENST00000489537 TMEM238C9JI98 176 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 H3BNG1 76 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 HINT1P49773 126 aaPredicted RBP4.52□□□□□ -1.69
SF3A3-208ENST00000489537 GAGE1Q13065 139 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 CIRBPQ14011 172 aaKnown RBP4.52□□□□□ -1.69
SF3A3-208ENST00000489537 FHL2Q14192 279 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 MPV17L2Q567V2 206 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 LYRM7Q5U5X0 104 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 ATP6V0E2Q8NHE4 81 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 TM2D2Q9BX73 214 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 WFDC10AQ9H1F0 79 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 X6R8D5 127 aa4.52□□□□□ -1.69
SF3A3-208ENST00000489537 NOTCH3Q9UM47 2321 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 IGLV4-69A0A075B6H9 119 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 TRBV6-8A0A0A6YYG3 113 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 A0A1B0GUV1 79 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 TMEM223A0PJW6 202 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 ZNF815PA8K554 130 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 J3QQQ9 107 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 SMIM13P0DJ93 91 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 IGHV4-30-4P0DP06 118 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 DEFB130BP0DP73 79 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 DEFB130AP0DP74 79 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 PTTG1IPP53801 180 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 GAGE4Q13068 117 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 GAGE5Q13069 117 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 SRSF9Q13242 221 aaKnown RBP eCLIP4.51□□□□□ -1.69
SF3A3-208ENST00000489537 MRPL23Q16540 153 aaKnown RBP4.51□□□□□ -1.69
SF3A3-208ENST00000489537 GAGE13Q4V321 117 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 C2orf91Q6ZV80 131 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 HIST1H4GQ99525 98 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 C11orf68Q9H3H3 251 aaKnown RBP4.51□□□□□ -1.69
SF3A3-208ENST00000489537 SPANXB1Q9NS25 103 aaPredicted RBP4.51□□□□□ -1.69
SF3A3-208ENST00000489537 TP73-AS1Q9UF72 201 aa4.51□□□□□ -1.69
SF3A3-208ENST00000489537 IGLV5-45A0A087WSX0 123 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 IGHV1-58A0A0C4DH39 117 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 PRB2P02812 416 aaPredicted RBP4.5□□□□□ -1.69
SF3A3-208ENST00000489537 ZNF22P17026 224 aaPredicted RBP4.5□□□□□ -1.69
SF3A3-208ENST00000489537 EMP1P54849 157 aa4.5□□□□□ -1.69
SF3A3-208ENST00000489537 DEFB135Q30KP9 77 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms