RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 C5orf38Q86SI9 138 aa11.88□□□□□ -0.51
MCF2L-229ENST00000488765 IGHV1-58A0A0C4DH39 117 aa11.88□□□□□ -0.51
MCF2L-229ENST00000488765 M0QY20 66 aa11.88□□□□□ -0.51
MCF2L-229ENST00000488765 ATOX1O00244 68 aa11.87□□□□□ -0.51
MCF2L-229ENST00000488765 PIK3CD-AS1Q5SR53 167 aa11.87□□□□□ -0.51
MCF2L-229ENST00000488765 CDKN2A-AS1Q9UH64 79 aa11.87□□□□□ -0.51
MCF2L-229ENST00000488765 ATP5G1P05496 136 aa11.87□□□□□ -0.51
MCF2L-229ENST00000488765 ITLN2Q8WWU7 325 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-229ENST00000488765 WNK1Q9H4A3 2382 aa11.87□□□□□ -0.51
MCF2L-229ENST00000488765 DOPEY1Q5JWR5 2465 aa11.87□□□□□ -0.51
MCF2L-229ENST00000488765 Q8N9W7 124 aa11.86□□□□□ -0.51
MCF2L-229ENST00000488765 VSIG2Q96IQ7 327 aa11.86□□□□□ -0.51
MCF2L-229ENST00000488765 C19orf84I3L1E1 186 aa11.86□□□□□ -0.51
MCF2L-229ENST00000488765 Q9H8V8 135 aa11.86□□□□□ -0.51
MCF2L-229ENST00000488765 DNAL4O96015 105 aa11.85□□□□□ -0.51
MCF2L-229ENST00000488765 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
MCF2L-229ENST00000488765 RPL18AQ02543 176 aaKnown RBP11.85□□□□□ -0.51
MCF2L-229ENST00000488765 FHL2Q14192 279 aa11.85□□□□□ -0.51
MCF2L-229ENST00000488765 C22orf24Q9Y442 160 aa11.85□□□□□ -0.51
MCF2L-229ENST00000488765 LINC00846Q9NV44 126 aa11.85□□□□□ -0.51
MCF2L-229ENST00000488765 ACANP16112 2415 aa11.85□□□□□ -0.51
MCF2L-229ENST00000488765 SLPIP03973 132 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 LY6G5BQ8NDX9 201 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 MTORP42345 2549 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 ANKRD17O75179 2603 aaKnown RBP11.84□□□□□ -0.51
MCF2L-229ENST00000488765 TRAV23DV6A0A075B6W5 121 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 COX7A2LO14548 114 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 UCNP55089 124 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 LINC00336Q6ZUF6 198 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 WFDC11Q8NEX6 87 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 SOSTDC1Q6X4U4 206 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 C9orf139Q6ZV77 190 aa11.84□□□□□ -0.51
MCF2L-229ENST00000488765 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-229ENST00000488765 LINC01600Q96MT4 127 aa11.83□□□□□ -0.52
MCF2L-229ENST00000488765 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
MCF2L-229ENST00000488765 ABCA2Q9BZC7 2435 aa11.83□□□□□ -0.52
MCF2L-229ENST00000488765 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
MCF2L-229ENST00000488765 IGHV1-69P01742 117 aa11.83□□□□□ -0.52
MCF2L-229ENST00000488765 RPS28P62857 69 aaKnown RBP11.83□□□□□ -0.52
MCF2L-229ENST00000488765 LINC00308Q8TCZ7 52 aa11.83□□□□□ -0.52
MCF2L-229ENST00000488765 BPESC1Q9GZL8 116 aa11.83□□□□□ -0.52
MCF2L-229ENST00000488765 FAM223BA6NKX1 122 aa11.82□□□□□ -0.52
MCF2L-229ENST00000488765 RPL35AP18077 110 aaKnown RBP11.82□□□□□ -0.52
MCF2L-229ENST00000488765 LINC01561Q8N1V8 128 aa11.82□□□□□ -0.52
MCF2L-229ENST00000488765 FAM104AQ969W3 186 aa11.82□□□□□ -0.52
MCF2L-229ENST00000488765 NCR3O14931 201 aa11.82□□□□□ -0.52
MCF2L-229ENST00000488765 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
MCF2L-229ENST00000488765 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
MCF2L-229ENST00000488765 A0A0U1RQV1 116 aa11.82□□□□□ -0.52
MCF2L-229ENST00000488765 IGHG2P01859 326 aa11.82□□□□□ -0.52
MCF2L-229ENST00000488765 SPINK13Q1W4C9 94 aa11.81□□□□□ -0.52
MCF2L-229ENST00000488765 SERP2Q8N6R1 65 aa11.81□□□□□ -0.52
MCF2L-229ENST00000488765 A0A0J9YX75 114 aa11.81□□□□□ -0.52
MCF2L-229ENST00000488765 C20orf197Q8N268 126 aa11.81□□□□□ -0.52
MCF2L-229ENST00000488765 USP24Q9UPU5 2620 aa11.81□□□□□ -0.52
MCF2L-229ENST00000488765 BRD3OSQ6XYD6 125 aa11.81□□□□□ -0.52
MCF2L-229ENST00000488765 COX6A2Q02221 97 aa11.8□□□□□ -0.52
MCF2L-229ENST00000488765 IGHV3-16A0A0C4DH30 117 aa11.8□□□□□ -0.52
MCF2L-229ENST00000488765 TMEM258P61165 79 aa11.8□□□□□ -0.52
MCF2L-229ENST00000488765 FAM110DQ8TAY7 271 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-229ENST00000488765 PRB1P04280 392 aa11.79□□□□□ -0.52
MCF2L-229ENST00000488765 PRIMA1Q86XR5 153 aa11.79□□□□□ -0.52
MCF2L-229ENST00000488765 RNASE1P07998 156 aaKnown RBP11.79□□□□□ -0.52
MCF2L-229ENST00000488765 MALP21145 153 aa11.79□□□□□ -0.52
MCF2L-229ENST00000488765 J3QLI3 93 aa11.78□□□□□ -0.52
MCF2L-229ENST00000488765 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
MCF2L-229ENST00000488765 RHPN1-AS1Q9BWJ2 59 aa11.78□□□□□ -0.52
MCF2L-229ENST00000488765 PFN2P35080 140 aa11.78□□□□□ -0.52
MCF2L-229ENST00000488765 MRPL53Q96EL3 112 aaKnown RBP11.78□□□□□ -0.52
MCF2L-229ENST00000488765 A0A087WYN8 130 aa11.77□□□□□ -0.52
MCF2L-229ENST00000488765 MAPK1IP1LQ8NDC0 245 aa11.77□□□□□ -0.52
MCF2L-229ENST00000488765 UPK3BQ9BT76 320 aa11.77□□□□□ -0.52
MCF2L-229ENST00000488765 CXCL5P42830 114 aa11.77□□□□□ -0.53
MCF2L-229ENST00000488765 MRAPQ8TCY5 172 aa11.77□□□□□ -0.53
MCF2L-229ENST00000488765 LY6EQ16553 131 aa11.76□□□□□ -0.53
MCF2L-229ENST00000488765 DGAT2L7PQ6IED9 249 aa11.76□□□□□ -0.53
MCF2L-229ENST00000488765 LENEPQ9Y5L5 61 aa11.76□□□□□ -0.53
MCF2L-229ENST00000488765 FAM19A1Q7Z5A9 133 aa11.75□□□□□ -0.53
MCF2L-229ENST00000488765 BEAN1Q3B7T3 259 aa11.75□□□□□ -0.53
MCF2L-229ENST00000488765 LINC00467Q9BRT7 94 aa11.75□□□□□ -0.53
MCF2L-229ENST00000488765 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
MCF2L-229ENST00000488765 TEX15Q9BXT5 2789 aa11.75□□□□□ -0.53
MCF2L-229ENST00000488765 U3KQE9 123 aa11.75□□□□□ -0.53
MCF2L-229ENST00000488765 GHRHP01286 108 aa11.74□□□□□ -0.53
MCF2L-229ENST00000488765 IGKV3OR2-268A0A0C4DH90 116 aa11.74□□□□□ -0.53
MCF2L-229ENST00000488765 INAFM2P0DMQ5 153 aa11.74□□□□□ -0.53
MCF2L-229ENST00000488765 Q6ZSN1 163 aa11.74□□□□□ -0.53
MCF2L-229ENST00000488765 TRBV6-5A0A0K0K1A5 114 aa11.73□□□□□ -0.53
MCF2L-229ENST00000488765 Q8N6K4 173 aa11.73□□□□□ -0.53
MCF2L-229ENST00000488765 SOCS3O14543 225 aa11.73□□□□□ -0.53
MCF2L-229ENST00000488765 SAA4P35542 130 aa11.73□□□□□ -0.53
MCF2L-229ENST00000488765 MINOS1Q5TGZ0 78 aa11.73□□□□□ -0.53
MCF2L-229ENST00000488765 NF1P21359 2839 aa11.73□□□□□ -0.53
MCF2L-229ENST00000488765 RPL28P46779 137 aaKnown RBP11.73□□□□□ -0.53
MCF2L-229ENST00000488765 ODF3BA8MYP8 253 aa11.72□□□□□ -0.53
MCF2L-229ENST00000488765 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
MCF2L-229ENST00000488765 TOMM7Q9P0U1 55 aa11.71□□□□□ -0.53
MCF2L-229ENST00000488765 SNURFQ9Y675 71 aa11.71□□□□□ -0.53
MCF2L-229ENST00000488765 LECT2O14960 151 aa11.71□□□□□ -0.54
MCF2L-229ENST00000488765 ENHOQ6UWT2 76 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms