RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 ETDBQ3ZM63 59 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 TEN1Q86WV5 123 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 SBSPONQ8IVN8 264 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 LY6G5BQ8NDX9 201 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 Q8TAT8 98 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 CCL17Q92583 94 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 TOMM6Q96B49 74 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 LINC01600Q96MT4 127 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 MUC4Q99102 2169 aa2.72□□□□□ -1.97
SRRM1-215ENST00000488317 ANKRD11Q6UB99 2663 aaPredicted RBP2.72□□□□□ -1.97
SRRM1-215ENST00000488317 CTSGP08311 255 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 LGALS1P09382 135 aaKnown RBP2.71□□□□□ -1.98
SRRM1-215ENST00000488317 APELAP0DMC3 54 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 ASIPP42127 132 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 DEFB109BQ30KR1 87 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 TMEM78Q5T7P6 136 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 MINOS1Q5TGZ0 78 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 Q6ZUT4 128 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 DYNAPQ8N1N2 210 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 Q8N6K4 173 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 SCGB3A1Q96QR1 104 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 ANAPC13Q9BS18 74 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 DPH3P1Q9H4G8 78 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 MINOS1-NBL1R4GNA1 71 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 VCANP13611 3396 aa2.71□□□□□ -1.98
SRRM1-215ENST00000488317 SPTBN1Q01082 2364 aaKnown RBP2.71□□□□□ -1.98
SRRM1-215ENST00000488317 TLN1Q9Y490 2541 aaKnown RBP2.7□□□□□ -1.98
SRRM1-215ENST00000488317 TRBV7-1A0A0A6YYK4 115 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 ZNF815PA8K554 130 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 A8MUU9 505 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 A8MWV9 139 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 TRGV3P03979 118 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 CD7P09564 240 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 SPINK8P0C7L1 97 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 COX6B1P14854 86 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 PRTN3P24158 256 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 FXYD7P58549 80 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 SPANXN1Q5VSR9 72 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 DAZ4Q86SG3 579 aaKnown RBP2.7□□□□□ -1.98
SRRM1-215ENST00000488317 TMEM141Q96I45 108 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 PRADC1Q9BSG0 188 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 TTTY13Q9BZ97 58 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 DAZ1Q9NQZ3 744 aaKnown RBP2.7□□□□□ -1.98
SRRM1-215ENST00000488317 ERG28Q9UKR5 140 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 UFC1Q9Y3C8 167 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 ZNF706Q9Y5V0 76 aaPredicted RBP2.7□□□□□ -1.98
SRRM1-215ENST00000488317 SPEGQ15772 3267 aa2.7□□□□□ -1.98
SRRM1-215ENST00000488317 EP300Q09472 2414 aaPredicted RBP2.7□□□□□ -1.98
SRRM1-215ENST00000488317 PTPRZ1P23471 2315 aaPredicted RBP2.69□□□□□ -1.98
SRRM1-215ENST00000488317 EYSQ5T1H1 3165 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 COL6A6A6NMZ7 2263 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 TRAV21A0A0B4J279 112 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 A0A0B4J2C4 111 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 A0A0J9YX75 114 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 C11orf86A6NJI1 115 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 E7EQL1 145 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 OVOL1O14753 267 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 SCGB1C2P0DMR2 95 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 P0DMU3 169 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 FAM231AP0DMU4 169 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 FAM231CP0DMU5 169 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 HLA-DMBP28068 263 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 CD164Q04900 197 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 Q6Q795 121 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 SCGB1D4Q6XE38 83 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 NDUFA11Q86Y39 141 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 C10orf126Q8N4M7 172 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 ITLN2Q8WWU7 325 aaPredicted RBP2.69□□□□□ -1.98
SRRM1-215ENST00000488317 SPANXDQ9BXN6 97 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 AGPAT4-IT1Q9H0P7 198 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 SPTA1P02549 2419 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 GVINP1Q7Z2Y8 2422 aa2.69□□□□□ -1.98
SRRM1-215ENST00000488317 MED13LQ71F56 2210 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.68□□□□□ -1.98
SRRM1-215ENST00000488317 TRAV8-2A0A0B4J237 113 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 LOC107984156A0A0G2JMH3 177 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 A0A0J9YY99 117 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 SPAARA0A1B0GVQ0 90 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 CLPSL1A2RUU4 121 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 SDHAF1A6NFY7 115 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 FAM223BA6NKX1 122 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 H3BVH4 76 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 BRI3O95415 125 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 IGHV1-69P01742 117 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 IGLV7-43P04211 117 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 INSL3P51460 131 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 EFNA4P52798 201 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 HES1Q14469 280 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 RHOHQ15669 191 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 ZFAND6Q6FIF0 208 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 AMTNQ6UX39 209 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 VMO1Q7Z5L0 202 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 ARL17AQ8IVW1 177 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 FAM223AQ8IWN6 122 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 PLEKHB2Q96CS7 222 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 RBM12B-AS1Q9P1G2 102 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 PRO1854Q9UHT4 67 aa2.68□□□□□ -1.98
SRRM1-215ENST00000488317 FREM2Q5SZK8 3169 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms