RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 PRSS47A8MTI9 375 aa11.78□□□□□ -0.52
NF1-211ENST00000487476 LAGE3Q14657 143 aa11.78□□□□□ -0.52
NF1-211ENST00000487476 GAGE12JA6NER3 117 aa11.77□□□□□ -0.52
NF1-211ENST00000487476 GYPEP15421 78 aa11.77□□□□□ -0.52
NF1-211ENST00000487476 GAGE4Q13068 117 aa11.77□□□□□ -0.52
NF1-211ENST00000487476 GAGE5Q13069 117 aa11.77□□□□□ -0.52
NF1-211ENST00000487476 COTL1Q14019 142 aa11.77□□□□□ -0.52
NF1-211ENST00000487476 GAGE13Q4V321 117 aa11.77□□□□□ -0.52
NF1-211ENST00000487476 DEFB104AQ8WTQ1 72 aa11.77□□□□□ -0.52
NF1-211ENST00000487476 MRPL35Q9NZE8 188 aaKnown RBP11.77□□□□□ -0.52
NF1-211ENST00000487476 SPCS1Q9Y6A9 102 aa11.77□□□□□ -0.52
NF1-211ENST00000487476 DYNC2H1Q8NCM8 4307 aaKnown RBP11.77□□□□□ -0.52
NF1-211ENST00000487476 TRBV25-1A0A075B6N4 114 aa11.77□□□□□ -0.53
NF1-211ENST00000487476 RHOHQ15669 191 aa11.77□□□□□ -0.53
NF1-211ENST00000487476 ZNRF2Q8NHG8 242 aa11.76□□□□□ -0.53
NF1-211ENST00000487476 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
NF1-211ENST00000487476 H7C1H1 209 aa11.76□□□□□ -0.53
NF1-211ENST00000487476 SMIM13P0DJ93 91 aa11.76□□□□□ -0.53
NF1-211ENST00000487476 A0A096LPF7 62 aa11.75□□□□□ -0.53
NF1-211ENST00000487476 K7ERJ3 54 aa11.75□□□□□ -0.53
NF1-211ENST00000487476 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
NF1-211ENST00000487476 FABP2P12104 132 aa11.75□□□□□ -0.53
NF1-211ENST00000487476 NEGR1Q7Z3B1 354 aa11.75□□□□□ -0.53
NF1-211ENST00000487476 TRBV10-1A0A0K0K1A3 114 aa11.74□□□□□ -0.53
NF1-211ENST00000487476 IGLL5B9A064 214 aa11.74□□□□□ -0.53
NF1-211ENST00000487476 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
NF1-211ENST00000487476 STARD9Q9P2P6 4700 aa11.74□□□□□ -0.53
NF1-211ENST00000487476 TRBV7-3A0A075B6L6 115 aa11.74□□□□□ -0.53
NF1-211ENST00000487476 A0A087WX48 190 aa11.74□□□□□ -0.53
NF1-211ENST00000487476 SMIM2Q9BVW6 85 aa11.74□□□□□ -0.53
NF1-211ENST00000487476 IGHV3-38A0A0C4DH36 116 aa11.73□□□□□ -0.53
NF1-211ENST00000487476 ZFAND6Q6FIF0 208 aa11.73□□□□□ -0.53
NF1-211ENST00000487476 RPL36AP83881 106 aaKnown RBP11.72□□□□□ -0.53
NF1-211ENST00000487476 CEND1Q8N111 149 aa11.72□□□□□ -0.53
NF1-211ENST00000487476 RPL36ALQ969Q0 106 aaKnown RBP11.72□□□□□ -0.53
NF1-211ENST00000487476 TRBV6-5A0A0K0K1A5 114 aa11.72□□□□□ -0.53
NF1-211ENST00000487476 SDHAF1A6NFY7 115 aa11.72□□□□□ -0.53
NF1-211ENST00000487476 LINC00694P0DN24 101 aa11.72□□□□□ -0.53
NF1-211ENST00000487476 SUMO2P61956 95 aaKnown RBP11.72□□□□□ -0.53
NF1-211ENST00000487476 CEMP1Q6PRD7 247 aaPredicted RBP11.72□□□□□ -0.53
NF1-211ENST00000487476 MAPKAPK5-AS1Q8N8E1 139 aa11.72□□□□□ -0.53
NF1-211ENST00000487476 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
NF1-211ENST00000487476 PLNP26678 52 aa11.71□□□□□ -0.53
NF1-211ENST00000487476 UBE2D3P61077 147 aa11.71□□□□□ -0.53
NF1-211ENST00000487476 UBE2D2P62837 147 aa11.71□□□□□ -0.53
NF1-211ENST00000487476 WWC2-AS2Q96NR7 200 aa11.71□□□□□ -0.53
NF1-211ENST00000487476 TM2D2Q9BX73 214 aa11.71□□□□□ -0.53
NF1-211ENST00000487476 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.71□□□□□ -0.54
NF1-211ENST00000487476 K7EMI3 77 aa11.71□□□□□ -0.54
NF1-211ENST00000487476 POLR2KP53803 58 aaKnown RBP11.71□□□□□ -0.54
NF1-211ENST00000487476 DNAJC30Q96LL9 226 aa11.71□□□□□ -0.54
NF1-211ENST00000487476 TENM2Q9NT68 2774 aa11.7□□□□□ -0.54
NF1-211ENST00000487476 PLECQ15149 4684 aaKnown RBP11.7□□□□□ -0.54
NF1-211ENST00000487476 ICOSQ9Y6W8 199 aa11.7□□□□□ -0.54
NF1-211ENST00000487476 H3BNG1 76 aa11.7□□□□□ -0.54
NF1-211ENST00000487476 PPP1R17O96001 155 aa11.7□□□□□ -0.54
NF1-211ENST00000487476 MUC7Q8TAX7 377 aa11.7□□□□□ -0.54
NF1-211ENST00000487476 LYSTQ99698 3801 aa11.69□□□□□ -0.54
NF1-211ENST00000487476 F8VRH5 84 aa11.69□□□□□ -0.54
NF1-211ENST00000487476 MRPL23Q16540 153 aaKnown RBP11.69□□□□□ -0.54
NF1-211ENST00000487476 C20orf78Q9BR46 151 aa11.69□□□□□ -0.54
NF1-211ENST00000487476 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
NF1-211ENST00000487476 ORMDL2Q53FV1 153 aa11.68□□□□□ -0.54
NF1-211ENST00000487476 ATP6V0E2Q8NHE4 81 aa11.68□□□□□ -0.54
NF1-211ENST00000487476 TOMM6Q96B49 74 aa11.67□□□□□ -0.54
NF1-211ENST00000487476 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
NF1-211ENST00000487476 SCGB3A1Q96QR1 104 aa11.67□□□□□ -0.54
NF1-211ENST00000487476 TRBV27A0A0K0K1C4 114 aa11.66□□□□□ -0.54
NF1-211ENST00000487476 TAL2Q16559 108 aa11.66□□□□□ -0.54
NF1-211ENST00000487476 CHTOPQ9Y3Y2 248 aaKnown RBP11.66□□□□□ -0.54
NF1-211ENST00000487476 VCYO14598 125 aa11.66□□□□□ -0.54
NF1-211ENST00000487476 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
NF1-211ENST00000487476 I3L3M4 83 aa11.65□□□□□ -0.54
NF1-211ENST00000487476 TSHBP01222 138 aa11.65□□□□□ -0.54
NF1-211ENST00000487476 DAZ4Q86SG3 579 aaKnown RBP11.65□□□□□ -0.54
NF1-211ENST00000487476 DAZ3Q9NR90 486 aaKnown RBP11.65□□□□□ -0.54
NF1-211ENST00000487476 APLNQ9ULZ1 77 aa11.65□□□□□ -0.54
NF1-211ENST00000487476 E9PLD3 99 aa11.65□□□□□ -0.55
NF1-211ENST00000487476 C15orf53Q8NAA6 179 aa11.65□□□□□ -0.55
NF1-211ENST00000487476 HIST1H4GQ99525 98 aa11.65□□□□□ -0.55
NF1-211ENST00000487476 RPL32P62910 135 aaKnown RBP11.64□□□□□ -0.55
NF1-211ENST00000487476 KLK5Q9Y337 293 aaPredicted RBP11.64□□□□□ -0.55
NF1-211ENST00000487476 ESRGQ1W209 222 aa11.63□□□□□ -0.55
NF1-211ENST00000487476 LYPD5Q6UWN5 251 aa11.63□□□□□ -0.55
NF1-211ENST00000487476 C2orf66Q6UXQ4 117 aa11.63□□□□□ -0.55
NF1-211ENST00000487476 BAALCQ8WXS3 180 aa11.63□□□□□ -0.55
NF1-211ENST00000487476 GTSF1LQ9H1H1 148 aa11.63□□□□□ -0.55
NF1-211ENST00000487476 MYMXA0A1B0GTQ4 84 aa11.63□□□□□ -0.55
NF1-211ENST00000487476 KIR2DL4Q99706 377 aa11.62□□□□□ -0.55
NF1-211ENST00000487476 RPL24P83731 157 aaKnown RBP11.61□□□□□ -0.55
NF1-211ENST00000487476 SH2D6Q7Z4S9 175 aa11.61□□□□□ -0.55
NF1-211ENST00000487476 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
NF1-211ENST00000487476 CASC10Q5T4H9 136 aa11.6□□□□□ -0.55
NF1-211ENST00000487476 PRSS29PA6NIE9 313 aa11.59□□□□□ -0.55
NF1-211ENST00000487476 CHCHD7Q9BUK0 85 aa11.59□□□□□ -0.55
NF1-211ENST00000487476 A0A1B0GWB2 263 aa11.58□□□□□ -0.55
NF1-211ENST00000487476 CYSLTR1Q9Y271 337 aa11.58□□□□□ -0.55
NF1-211ENST00000487476 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.58□□□□□ -0.56
NF1-211ENST00000487476 IGKV2-29A2NJV5 120 aaPredicted RBP11.58□□□□□ -0.56
NF1-211ENST00000487476 LINC00588Q9Y4M8 146 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms