RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 HBDP02042 147 aa4.82□□□□□ -1.64
UBR4-214ENST00000486515 SCGB1A1P11684 91 aa4.82□□□□□ -1.64
UBR4-214ENST00000486515 ZNF25P17030 456 aaPredicted RBP4.82□□□□□ -1.64
UBR4-214ENST00000486515 HSPB8Q9UJY1 196 aa4.82□□□□□ -1.64
UBR4-214ENST00000486515 APLNQ9ULZ1 77 aa4.82□□□□□ -1.64
UBR4-214ENST00000486515 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.81□□□□□ -1.64
UBR4-214ENST00000486515 IGKV2-29A2NJV5 120 aaPredicted RBP4.81□□□□□ -1.64
UBR4-214ENST00000486515 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.81□□□□□ -1.64
UBR4-214ENST00000486515 SIVA1O15304 175 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 SERF1AO75920 110 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 TSHBP01222 138 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 CRPP02741 224 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 GAGE6Q13070 117 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 ESRGQ1W209 222 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 C2orf66Q6UXQ4 117 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 C10orf126Q8N4M7 172 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 OR5A1Q8NGJ0 315 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 SCGB3A1Q96QR1 104 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 CHCHD7Q9BUK0 85 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 Q9UF83 564 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 MRPS16Q9Y3D3 137 aaKnown RBP4.81□□□□□ -1.64
UBR4-214ENST00000486515 MUC4Q99102 2169 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 NACAE9PAV3 2078 aa4.81□□□□□ -1.64
UBR4-214ENST00000486515 ATP5LO75964 103 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 LEPROTL1O95214 131 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 LY6G6CO95867 125 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 ANGP03950 147 aaKnown RBP4.8□□□□□ -1.64
UBR4-214ENST00000486515 LINC00694P0DN24 101 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 SNRPEP62304 92 aaKnown RBP4.8□□□□□ -1.64
UBR4-214ENST00000486515 TTC32Q5I0X7 151 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 C20orf203Q8NBC4 194 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 TMEM141Q96I45 108 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 Q9H8V8 135 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 SPANXA1Q9NS26 97 aa4.8□□□□□ -1.64
UBR4-214ENST00000486515 IGLV2-18A0A075B6J9 118 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 M0R143 59 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 IGHV3-30P01768 117 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 IGHV3-33P01772 117 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 PRSS1P07477 247 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 IGHV3-30-3P0DP02 117 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 IGHV3-30-5P0DP03 117 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 FGF6P10767 208 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 FABP4P15090 132 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 LGALS9CQ6DKI2 356 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 TEX43Q6ZNM6 134 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 NTM-AS1Q6ZSK4 140 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 ERASQ7Z444 233 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 TOMM6Q96B49 74 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 PACRGQ96M98 296 aaPredicted RBP4.79□□□□□ -1.64
UBR4-214ENST00000486515 UPK3BQ9BT76 320 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 MAP1LC3CQ9BXW4 147 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 VCX2Q9H322 139 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 LINC00588Q9Y4M8 146 aa4.79□□□□□ -1.64
UBR4-214ENST00000486515 PLECQ15149 4684 aaKnown RBP4.79□□□□□ -1.64
UBR4-214ENST00000486515 A0A1B0GUV1 79 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 C20orf202A1L168 122 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 LINC01546A6NGU7 62 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 NPSP0C0P6 89 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 ESDP10768 282 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 PMCHL1Q16048 86 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 PDZD11Q5EBL8 140 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 WFDC10BQ8IUB3 73 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 FAM19A2Q8N3H0 131 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 RMI2Q96E14 147 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 TIMM17AQ99595 171 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
UBR4-214ENST00000486515 CSDC2Q9Y534 153 aaKnown RBP4.78□□□□□ -1.64
UBR4-214ENST00000486515 IGKV3OR2-268A0A0C4DH90 116 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 IFITM10A6NMD0 228 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 SMCPP49901 116 aaPredicted RBP4.77□□□□□ -1.65
UBR4-214ENST00000486515 RPL39P62891 51 aaKnown RBP4.77□□□□□ -1.65
UBR4-214ENST00000486515 SEC11AP67812 179 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 SS18Q15532 418 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 MPV17L2Q567V2 206 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 LINC01556Q5JQF7 62 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 ZNF664Q8N3J9 261 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 UBE2D4Q9Y2X8 147 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 PYGO1Q9Y3Y4 419 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 DNAH10Q8IVF4 4471 aa4.77□□□□□ -1.65
UBR4-214ENST00000486515 HUWE1Q7Z6Z7 4374 aaKnown RBP4.76□□□□□ -1.65
UBR4-214ENST00000486515 ALMS1Q8TCU4 4167 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 TRAV8-3A0A0A6YYJ7 113 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 CCL25O15444 150 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 PSCAO43653 123 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 DNAH10OSP0CZ25 163 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 MRPS36P82909 103 aaKnown RBP4.76□□□□□ -1.65
UBR4-214ENST00000486515 COA6Q5JTJ3 125 aaKnown RBP4.76□□□□□ -1.65
UBR4-214ENST00000486515 LINC00269Q8N2A0 174 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 Q8N976 141 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 UBE2WQ96B02 151 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 IFI27L1Q96BM0 104 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 KLK12Q9UKR0 248 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 COX11Q9Y6N1 276 aa4.76□□□□□ -1.65
UBR4-214ENST00000486515 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
UBR4-214ENST00000486515 TRAV8-4A0A0B4J246 113 aa4.75□□□□□ -1.65
UBR4-214ENST00000486515 A0A1B0GV72 72 aa4.75□□□□□ -1.65
UBR4-214ENST00000486515 KRTDAPP60985 99 aa4.75□□□□□ -1.65
UBR4-214ENST00000486515 REG3AQ06141 175 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms