RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 VCYO14598 125 aa8.36□□□□□ -1.07
CHMP3-208ENST00000486404 SMAGPQ0VAQ4 97 aa8.36□□□□□ -1.07
CHMP3-208ENST00000486404 MRPL51Q4U2R6 128 aaKnown RBP8.36□□□□□ -1.07
CHMP3-208ENST00000486404 FAM104BQ5XKR9 115 aa8.36□□□□□ -1.07
CHMP3-208ENST00000486404 CFAP161Q6P656 301 aa8.36□□□□□ -1.07
CHMP3-208ENST00000486404 ESDP10768 282 aa8.35□□□□□ -1.07
CHMP3-208ENST00000486404 CKS2P33552 79 aa8.35□□□□□ -1.07
CHMP3-208ENST00000486404 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
CHMP3-208ENST00000486404 CNBPP62633 177 aaKnown RBP8.35□□□□□ -1.07
CHMP3-208ENST00000486404 NRACQ8N912 160 aa8.35□□□□□ -1.07
CHMP3-208ENST00000486404 LINC00862A6NCI5 91 aa8.34□□□□□ -1.07
CHMP3-208ENST00000486404 XCL1P47992 114 aa8.34□□□□□ -1.07
CHMP3-208ENST00000486404 PNRC1Q12796 327 aaPredicted RBP8.34□□□□□ -1.07
CHMP3-208ENST00000486404 C9orf163Q8N9P6 203 aa8.34□□□□□ -1.07
CHMP3-208ENST00000486404 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
CHMP3-208ENST00000486404 IGHV3-64A0A075B6Q5 118 aa8.33□□□□□ -1.08
CHMP3-208ENST00000486404 SS18Q15532 418 aa8.33□□□□□ -1.08
CHMP3-208ENST00000486404 HIGD2BQ4VC39 106 aa8.33□□□□□ -1.08
CHMP3-208ENST00000486404 MRPL52Q86TS9 123 aaKnown RBP8.33□□□□□ -1.08
CHMP3-208ENST00000486404 TMEM18Q96B42 140 aa8.33□□□□□ -1.08
CHMP3-208ENST00000486404 C20orf78Q9BR46 151 aa8.33□□□□□ -1.08
CHMP3-208ENST00000486404 SRRM2Q9UQ35 2752 aaKnown RBP8.33□□□□□ -1.08
CHMP3-208ENST00000486404 D6R8Y8 96 aa8.32□□□□□ -1.08
CHMP3-208ENST00000486404 TCAPO15273 167 aa8.32□□□□□ -1.08
CHMP3-208ENST00000486404 CCL25O15444 150 aa8.32□□□□□ -1.08
CHMP3-208ENST00000486404 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
CHMP3-208ENST00000486404 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
CHMP3-208ENST00000486404 VPS13BQ7Z7G8 4022 aa8.32□□□□□ -1.08
CHMP3-208ENST00000486404 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 A0A1B0GXF2 115 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 MT-ND4LP03901 98 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 FOXI1Q12951 378 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 ZNF664Q8N3J9 261 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 SMIM2Q9BVW6 85 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 FAT1Q14517 4588 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
CHMP3-208ENST00000486404 DMBT1Q9UGM3 2413 aaPredicted RBP8.3□□□□□ -1.08
CHMP3-208ENST00000486404 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
CHMP3-208ENST00000486404 PPBPP02775 128 aa8.3□□□□□ -1.08
CHMP3-208ENST00000486404 ANAPC16Q96DE5 110 aa8.3□□□□□ -1.08
CHMP3-208ENST00000486404 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
CHMP3-208ENST00000486404 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.3□□□□□ -1.08
CHMP3-208ENST00000486404 FLG2Q5D862 2391 aaPredicted RBP8.3□□□□□ -1.08
CHMP3-208ENST00000486404 TRBV24-1A0A075B6N3 115 aa8.29□□□□□ -1.08
CHMP3-208ENST00000486404 RPL32P62910 135 aaKnown RBP8.29□□□□□ -1.08
CHMP3-208ENST00000486404 CLLU1Q5K131 121 aa8.29□□□□□ -1.08
CHMP3-208ENST00000486404 ORMDL3Q8N138 153 aa8.29□□□□□ -1.08
CHMP3-208ENST00000486404 DPH3Q96FX2 82 aa8.29□□□□□ -1.08
CHMP3-208ENST00000486404 UBE2D4Q9Y2X8 147 aa8.29□□□□□ -1.08
CHMP3-208ENST00000486404 IGHV1-58A0A0C4DH39 117 aa8.28□□□□□ -1.08
CHMP3-208ENST00000486404 PHOX2AO14813 284 aa8.28□□□□□ -1.08
CHMP3-208ENST00000486404 NPYP01303 97 aa8.28□□□□□ -1.08
CHMP3-208ENST00000486404 MALP21145 153 aa8.28□□□□□ -1.08
CHMP3-208ENST00000486404 RNASE13Q5GAN3 156 aaKnown RBP8.28□□□□□ -1.08
CHMP3-208ENST00000486404 CD164L2Q6UWJ8 174 aa8.28□□□□□ -1.08
CHMP3-208ENST00000486404 SDIM1Q6ZPB5 146 aa8.28□□□□□ -1.08
CHMP3-208ENST00000486404 PKIGQ9Y2B9 76 aa8.28□□□□□ -1.08
CHMP3-208ENST00000486404 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
CHMP3-208ENST00000486404 C1orf196B1AJZ1 125 aa8.27□□□□□ -1.09
CHMP3-208ENST00000486404 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
CHMP3-208ENST00000486404 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
CHMP3-208ENST00000486404 Q6ZUT4 128 aa8.27□□□□□ -1.09
CHMP3-208ENST00000486404 PRELID3AQ96N28 172 aa8.27□□□□□ -1.09
CHMP3-208ENST00000486404 TIMM21Q9BVV7 248 aa8.27□□□□□ -1.09
CHMP3-208ENST00000486404 TRAV13-1A0A0B4J241 112 aa8.26□□□□□ -1.09
CHMP3-208ENST00000486404 ZNF561-AS1K7EIQ3 104 aa8.26□□□□□ -1.09
CHMP3-208ENST00000486404 COX7A2LO14548 114 aa8.26□□□□□ -1.09
CHMP3-208ENST00000486404 SLPIP03973 132 aa8.26□□□□□ -1.09
CHMP3-208ENST00000486404 RAB5AP20339 215 aa8.26□□□□□ -1.09
CHMP3-208ENST00000486404 TMEM136Q6ZRR5 245 aa8.26□□□□□ -1.09
CHMP3-208ENST00000486404 SPANXA1Q9NS26 97 aa8.26□□□□□ -1.09
CHMP3-208ENST00000486404 PANO1I0J062 215 aa8.25□□□□□ -1.09
CHMP3-208ENST00000486404 GHRHP01286 108 aa8.25□□□□□ -1.09
CHMP3-208ENST00000486404 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
CHMP3-208ENST00000486404 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
CHMP3-208ENST00000486404 UQCC3Q6UW78 93 aa8.25□□□□□ -1.09
CHMP3-208ENST00000486404 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
CHMP3-208ENST00000486404 CARD19Q96LW7 228 aa8.25□□□□□ -1.09
CHMP3-208ENST00000486404 IGKV2-24A0A0C4DH68 120 aa8.24□□□□□ -1.09
CHMP3-208ENST00000486404 COX6A2Q02221 97 aa8.24□□□□□ -1.09
CHMP3-208ENST00000486404 MAP1LC3AQ9H492 121 aa8.24□□□□□ -1.09
CHMP3-208ENST00000486404 LAMTOR2Q9Y2Q5 125 aa8.24□□□□□ -1.09
CHMP3-208ENST00000486404 IFITM10A6NMD0 228 aa8.23□□□□□ -1.09
CHMP3-208ENST00000486404 IFI27P40305 119 aaPredicted RBP8.23□□□□□ -1.09
CHMP3-208ENST00000486404 CIRBPQ14011 172 aaKnown RBP8.23□□□□□ -1.09
CHMP3-208ENST00000486404 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
CHMP3-208ENST00000486404 LOC389332A0A1B0GUA5 103 aa8.22□□□□□ -1.09
CHMP3-208ENST00000486404 APOMO95445 188 aa8.22□□□□□ -1.09
CHMP3-208ENST00000486404 MAJINQ3KP22 176 aa8.22□□□□□ -1.09
CHMP3-208ENST00000486404 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
CHMP3-208ENST00000486404 A0A087WYN8 130 aa8.21□□□□□ -1.1
CHMP3-208ENST00000486404 ADCYAP1P18509 176 aa8.21□□□□□ -1.1
CHMP3-208ENST00000486404 MRPS36P82909 103 aaKnown RBP8.21□□□□□ -1.1
CHMP3-208ENST00000486404 SYCNQ0VAF6 134 aa8.21□□□□□ -1.1
CHMP3-208ENST00000486404 C5orf38Q86SI9 138 aa8.21□□□□□ -1.1
CHMP3-208ENST00000486404 COMMD7Q86VX2 200 aa8.21□□□□□ -1.1
CHMP3-208ENST00000486404 PRSS3P2Q8NHM4 247 aa8.21□□□□□ -1.1
CHMP3-208ENST00000486404 C7orf33Q8WU49 177 aa8.21□□□□□ -1.1
CHMP3-208ENST00000486404 CTDSP1Q9GZU7 261 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms