RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 SETXQ7Z333 2677 aaKnown RBP10.9□□□□□ -0.66
TTC3-219ENST00000485402 LGALS9O00182 355 aa10.9□□□□□ -0.66
TTC3-219ENST00000485402 DEFB136Q30KP8 78 aa10.9□□□□□ -0.66
TTC3-219ENST00000485402 BRI3O95415 125 aa10.9□□□□□ -0.67
TTC3-219ENST00000485402 NDUFV3P56181 108 aaKnown RBP10.9□□□□□ -0.67
TTC3-219ENST00000485402 C18orf65Q6ZTR6 163 aa10.9□□□□□ -0.67
TTC3-219ENST00000485402 H3BMM0 161 aa10.89□□□□□ -0.67
TTC3-219ENST00000485402 UBE2WQ96B02 151 aa10.89□□□□□ -0.67
TTC3-219ENST00000485402 IGHV1OR15-1A0A075B7D0 117 aa10.89□□□□□ -0.67
TTC3-219ENST00000485402 NXPH4O95158 308 aa10.89□□□□□ -0.67
TTC3-219ENST00000485402 SNRPD3P62318 126 aaKnown RBP10.89□□□□□ -0.67
TTC3-219ENST00000485402 DCANP1Q8TF63 244 aa10.89□□□□□ -0.67
TTC3-219ENST00000485402 COX6CP09669 75 aa10.88□□□□□ -0.67
TTC3-219ENST00000485402 IFITM1P13164 125 aa10.88□□□□□ -0.67
TTC3-219ENST00000485402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
TTC3-219ENST00000485402 A0A0B4J2C4 111 aa10.88□□□□□ -0.67
TTC3-219ENST00000485402 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
TTC3-219ENST00000485402 NHLRC4P0CG21 123 aaPredicted RBP10.88□□□□□ -0.67
TTC3-219ENST00000485402 SYNJ2BPP57105 145 aa10.88□□□□□ -0.67
TTC3-219ENST00000485402 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
TTC3-219ENST00000485402 NSD1Q96L73 2696 aaPredicted RBP10.87□□□□□ -0.67
TTC3-219ENST00000485402 A0A1W2PRX2 142 aa10.87□□□□□ -0.67
TTC3-219ENST00000485402 RPL32P62910 135 aaKnown RBP10.87□□□□□ -0.67
TTC3-219ENST00000485402 APRG1Q8IVJ8 170 aa10.87□□□□□ -0.67
TTC3-219ENST00000485402 Q8N2B8 174 aa10.87□□□□□ -0.67
TTC3-219ENST00000485402 ICOSQ9Y6W8 199 aa10.87□□□□□ -0.67
TTC3-219ENST00000485402 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 GAGE12JA6NER3 117 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 GAGE7O76087 117 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 GAGE12FP0CL80 117 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 GAGE12GP0CL81 117 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 GAGE12IP0CL82 117 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 GAGE4Q13068 117 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 RHOHQ15669 191 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 POM121L12Q8N7R1 296 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 CITED1Q99966 193 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 TRBV6-5A0A0K0K1A5 114 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 UBE2E2Q96LR5 201 aa10.86□□□□□ -0.67
TTC3-219ENST00000485402 TMEM89A2RUT3 159 aa10.85□□□□□ -0.67
TTC3-219ENST00000485402 NSUN5P1Q3KNT7 163 aa10.85□□□□□ -0.67
TTC3-219ENST00000485402 TEP1Q99973 2627 aaKnown RBP10.85□□□□□ -0.67
TTC3-219ENST00000485402 C9orf85Q96MD7 179 aa10.85□□□□□ -0.67
TTC3-219ENST00000485402 A0A0J9YX75 114 aa10.84□□□□□ -0.67
TTC3-219ENST00000485402 H7C423 109 aa10.84□□□□□ -0.67
TTC3-219ENST00000485402 ODF3Q96PU9 254 aa10.84□□□□□ -0.67
TTC3-219ENST00000485402 HOXD3P31249 432 aaPredicted RBP10.84□□□□□ -0.67
TTC3-219ENST00000485402 RPL13AP40429 203 aaKnown RBP10.84□□□□□ -0.67
TTC3-219ENST00000485402 HILS1P60008 231 aa10.84□□□□□ -0.67
TTC3-219ENST00000485402 RNASE1P07998 156 aaKnown RBP10.84□□□□□ -0.67
TTC3-219ENST00000485402 DGAT2L7PQ6IED9 249 aa10.84□□□□□ -0.67
TTC3-219ENST00000485402 NIPBLQ6KC79 2804 aaeCLIP10.83□□□□□ -0.684e-6■■■■□ 23.4
TTC3-219ENST00000485402 TRBV7-9A0A0J9YWB2 115 aa10.83□□□□□ -0.68
TTC3-219ENST00000485402 SLURP1P55000 103 aa10.83□□□□□ -0.68
TTC3-219ENST00000485402 SMIM20Q8N5G0 67 aa10.83□□□□□ -0.68
TTC3-219ENST00000485402 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
TTC3-219ENST00000485402 SVIPQ8NHG7 77 aa10.82□□□□□ -0.68
TTC3-219ENST00000485402 TRBV30A0A0K0K1B3 111 aa10.82□□□□□ -0.68
TTC3-219ENST00000485402 CHCHD5Q9BSY4 110 aa10.82□□□□□ -0.68
TTC3-219ENST00000485402 IGHV1-58A0A0C4DH39 117 aa10.81□□□□□ -0.68
TTC3-219ENST00000485402 IGHV3OR16-12A0A075B7B8 117 aa10.8□□□□□ -0.68
TTC3-219ENST00000485402 RNF152Q8N8N0 203 aa10.8□□□□□ -0.68
TTC3-219ENST00000485402 DEFB131AP59861 70 aa10.8□□□□□ -0.68
TTC3-219ENST00000485402 Q6ZSN1 163 aa10.79□□□□□ -0.68
TTC3-219ENST00000485402 LITAFQ99732 161 aa10.79□□□□□ -0.68
TTC3-219ENST00000485402 CDKN2A-AS1Q9UH64 79 aa10.79□□□□□ -0.68
TTC3-219ENST00000485402 TRGV11A0A075B6L2 103 aa10.79□□□□□ -0.68
TTC3-219ENST00000485402 CITED2Q99967 270 aaPredicted RBP10.79□□□□□ -0.68
TTC3-219ENST00000485402 MEIG1Q5JSS6 88 aa10.79□□□□□ -0.68
TTC3-219ENST00000485402 RBMY1A1P0DJD3 496 aaKnown RBP10.78□□□□□ -0.68
TTC3-219ENST00000485402 RBMY1CP0DJD4 496 aa10.78□□□□□ -0.68
TTC3-219ENST00000485402 RBMY1FQ15415 496 aaKnown RBP10.78□□□□□ -0.68
TTC3-219ENST00000485402 VSIG2Q96IQ7 327 aa10.78□□□□□ -0.68
TTC3-219ENST00000485402 MIAQ16674 131 aa10.78□□□□□ -0.68
TTC3-219ENST00000485402 K7EMT4 169 aa10.77□□□□□ -0.68
TTC3-219ENST00000485402 K7EQG2 157 aa10.77□□□□□ -0.68
TTC3-219ENST00000485402 MRPS36P82909 103 aaKnown RBP10.77□□□□□ -0.68
TTC3-219ENST00000485402 C4orf3Q8WVX3 66 aa10.77□□□□□ -0.68
TTC3-219ENST00000485402 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.68
TTC3-219ENST00000485402 TRAV13-1A0A0B4J241 112 aa10.76□□□□□ -0.69
TTC3-219ENST00000485402 NDUFA7O95182 113 aa10.76□□□□□ -0.69
TTC3-219ENST00000485402 Q9H8V8 135 aa10.76□□□□□ -0.69
TTC3-219ENST00000485402 TMEM61Q8N0U2 210 aa10.76□□□□□ -0.69
TTC3-219ENST00000485402 LINC01587Q99440 93 aa10.76□□□□□ -0.69
TTC3-219ENST00000485402 FAM104AQ969W3 186 aa10.75□□□□□ -0.69
TTC3-219ENST00000485402 HERV-K104P63124 156 aa10.75□□□□□ -0.69
TTC3-219ENST00000485402 CIRBPQ14011 172 aaKnown RBP10.75□□□□□ -0.69
TTC3-219ENST00000485402 C16orf95Q9H693 158 aa10.74□□□□□ -0.69
TTC3-219ENST00000485402 ATRQ13535 2644 aa10.74□□□□□ -0.69
TTC3-219ENST00000485402 LST1O00453 97 aa10.73□□□□□ -0.69
TTC3-219ENST00000485402 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
TTC3-219ENST00000485402 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
TTC3-219ENST00000485402 H3BT86 120 aa10.73□□□□□ -0.69
TTC3-219ENST00000485402 CCL24O00175 119 aa10.73□□□□□ -0.69
TTC3-219ENST00000485402 COX6A2Q02221 97 aa10.73□□□□□ -0.69
TTC3-219ENST00000485402 UBE2D4Q9Y2X8 147 aa10.73□□□□□ -0.69
TTC3-219ENST00000485402 CYSRT1A8MQ03 144 aa10.72□□□□□ -0.69
TTC3-219ENST00000485402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.72□□□□□ -0.69
TTC3-219ENST00000485402 TMEM101Q96IK0 257 aa10.72□□□□□ -0.69
TTC3-219ENST00000485402 PYGO1Q9Y3Y4 419 aa10.72□□□□□ -0.69
TTC3-219ENST00000485402 FAM236AA0A1B0GUQ0 79 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms