RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
CTSA-207ENST00000484855 SPART-AS1P0CW21 52 aa11.75□□□□□ -0.53
CTSA-207ENST00000484855 GYPEP15421 78 aa11.75□□□□□ -0.53
CTSA-207ENST00000484855 MPV17L2Q567V2 206 aa11.75□□□□□ -0.53
CTSA-207ENST00000484855 SAMD5Q5TGI4 173 aa11.75□□□□□ -0.53
CTSA-207ENST00000484855 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
CTSA-207ENST00000484855 TRBV25-1A0A075B6N4 114 aa11.74□□□□□ -0.53
CTSA-207ENST00000484855 A0A0J9YXV3 536 aa11.74□□□□□ -0.53
CTSA-207ENST00000484855 MRPS36P82909 103 aaKnown RBP11.74□□□□□ -0.53
CTSA-207ENST00000484855 UBE2L6O14933 153 aa11.74□□□□□ -0.53
CTSA-207ENST00000484855 RETNQ9HD89 108 aa11.74□□□□□ -0.53
CTSA-207ENST00000484855 SMAGPQ0VAQ4 97 aa11.73□□□□□ -0.53
CTSA-207ENST00000484855 MAPKAPK5-AS1Q8N8E1 139 aa11.72□□□□□ -0.53
CTSA-207ENST00000484855 PAX4O43316 350 aa11.72□□□□□ -0.53
CTSA-207ENST00000484855 ATP5G1P05496 136 aa11.72□□□□□ -0.53
CTSA-207ENST00000484855 ZNF22P17026 224 aaPredicted RBP11.72□□□□□ -0.53
CTSA-207ENST00000484855 COL5A1-AS1Q5SY13 56 aa11.71□□□□□ -0.53
CTSA-207ENST00000484855 CSDC2Q9Y534 153 aaKnown RBP11.71□□□□□ -0.53
CTSA-207ENST00000484855 TRBV6-8A0A0A6YYG3 113 aa11.71□□□□□ -0.54
CTSA-207ENST00000484855 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.54
CTSA-207ENST00000484855 ATP6V0E2Q8NHE4 81 aa11.71□□□□□ -0.54
CTSA-207ENST00000484855 TEX48A0A1B0GUV7 120 aa11.7□□□□□ -0.54
CTSA-207ENST00000484855 H7C423 109 aa11.7□□□□□ -0.54
CTSA-207ENST00000484855 BVES-AS1Q5T3Y7 98 aa11.7□□□□□ -0.54
CTSA-207ENST00000484855 OR5A1Q8NGJ0 315 aa11.7□□□□□ -0.54
CTSA-207ENST00000484855 HIGD1BQ9P298 99 aa11.7□□□□□ -0.54
CTSA-207ENST00000484855 A0A1B0GV90 55 aa11.69□□□□□ -0.54
CTSA-207ENST00000484855 A0A0J9YY99 117 aa11.69□□□□□ -0.54
CTSA-207ENST00000484855 MYMXA0A1B0GTQ4 84 aa11.69□□□□□ -0.54
CTSA-207ENST00000484855 TINCRA0A1B0GVN0 87 aa11.69□□□□□ -0.54
CTSA-207ENST00000484855 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
CTSA-207ENST00000484855 HSD52Q0P140 79 aa11.69□□□□□ -0.54
CTSA-207ENST00000484855 TMEM101Q96IK0 257 aa11.69□□□□□ -0.54
CTSA-207ENST00000484855 UBE2D1P51668 147 aa11.68□□□□□ -0.54
CTSA-207ENST00000484855 F5H768 121 aa11.68□□□□□ -0.54
CTSA-207ENST00000484855 GAGE6Q13070 117 aa11.68□□□□□ -0.54
CTSA-207ENST00000484855 VSIG2Q96IQ7 327 aa11.68□□□□□ -0.54
CTSA-207ENST00000484855 ZNF815PA8K554 130 aa11.67□□□□□ -0.54
CTSA-207ENST00000484855 HTN3P15516 51 aa11.67□□□□□ -0.54
CTSA-207ENST00000484855 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
CTSA-207ENST00000484855 CDC42SE2Q9NRR3 84 aa11.67□□□□□ -0.54
CTSA-207ENST00000484855 TRAV26-1A0A087WT03 109 aa11.66□□□□□ -0.54
CTSA-207ENST00000484855 A0A096LPF7 62 aa11.66□□□□□ -0.54
CTSA-207ENST00000484855 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
CTSA-207ENST00000484855 GEMIN7Q9H840 131 aaKnown RBP11.66□□□□□ -0.54
CTSA-207ENST00000484855 TSPEAR-AS2P59090 65 aa11.65□□□□□ -0.54
CTSA-207ENST00000484855 IGHV3-64A0A075B6Q5 118 aa11.65□□□□□ -0.54
CTSA-207ENST00000484855 LEPROTO15243 131 aa11.65□□□□□ -0.54
CTSA-207ENST00000484855 LINC00469Q8N7U9 141 aa11.65□□□□□ -0.54
CTSA-207ENST00000484855 J3QQQ9 107 aa11.64□□□□□ -0.55
CTSA-207ENST00000484855 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
CTSA-207ENST00000484855 LGALS3P17931 250 aaKnown RBP11.64□□□□□ -0.55
CTSA-207ENST00000484855 MDFIQ99750 246 aa11.64□□□□□ -0.55
CTSA-207ENST00000484855 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
CTSA-207ENST00000484855 C12orf74Q32Q52 190 aa11.64□□□□□ -0.55
CTSA-207ENST00000484855 TRAV13-1A0A0B4J241 112 aa11.63□□□□□ -0.55
CTSA-207ENST00000484855 TIRAPP58753 221 aa11.63□□□□□ -0.55
CTSA-207ENST00000484855 SCGB1D4Q6XE38 83 aa11.62□□□□□ -0.55
CTSA-207ENST00000484855 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
CTSA-207ENST00000484855 PLEKHB2Q96CS7 222 aa11.62□□□□□ -0.55
CTSA-207ENST00000484855 NOTCH1P46531 2555 aa11.62□□□□□ -0.55
CTSA-207ENST00000484855 HERVK_113P63121 156 aa11.62□□□□□ -0.55
CTSA-207ENST00000484855 SEC11AP67812 179 aa11.62□□□□□ -0.55
CTSA-207ENST00000484855 LINC00242Q5T6M2 205 aa11.62□□□□□ -0.55
CTSA-207ENST00000484855 FAM19A3Q7Z5A8 133 aa11.62□□□□□ -0.55
CTSA-207ENST00000484855 IGLV5-45A0A087WSX0 123 aa11.61□□□□□ -0.55
CTSA-207ENST00000484855 IGLV4-60A0A075B6I1 120 aa11.61□□□□□ -0.55
CTSA-207ENST00000484855 H3BRM9 83 aa11.61□□□□□ -0.55
CTSA-207ENST00000484855 SPINK8P0C7L1 97 aa11.61□□□□□ -0.55
CTSA-207ENST00000484855 CDKN2A-AS1Q9UH64 79 aa11.61□□□□□ -0.55
CTSA-207ENST00000484855 TRAV8-3A0A0A6YYJ7 113 aa11.6□□□□□ -0.55
CTSA-207ENST00000484855 IGHV1-58A0A0C4DH39 117 aa11.6□□□□□ -0.55
CTSA-207ENST00000484855 IGHV3-30-3P0DP02 117 aa11.6□□□□□ -0.55
CTSA-207ENST00000484855 GCSHP23434 173 aa11.6□□□□□ -0.55
CTSA-207ENST00000484855 COX6A2Q02221 97 aa11.6□□□□□ -0.55
CTSA-207ENST00000484855 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
CTSA-207ENST00000484855 ICOSQ9Y6W8 199 aa11.6□□□□□ -0.55
CTSA-207ENST00000484855 K7EIL1 84 aa11.6□□□□□ -0.55
CTSA-207ENST00000484855 A0A0J9YWU9 116 aa11.59□□□□□ -0.55
CTSA-207ENST00000484855 TMEM262E9PQX1 116 aa11.59□□□□□ -0.55
CTSA-207ENST00000484855 TAL2Q16559 108 aa11.59□□□□□ -0.55
CTSA-207ENST00000484855 HIST1H4GQ99525 98 aa11.59□□□□□ -0.55
CTSA-207ENST00000484855 KPRPQ5T749 579 aaPredicted RBP11.58□□□□□ -0.56
CTSA-207ENST00000484855 CEND1Q8N111 149 aa11.58□□□□□ -0.56
CTSA-207ENST00000484855 A6NDN8 102 aa11.58□□□□□ -0.56
CTSA-207ENST00000484855 SH2D6Q7Z4S9 175 aa11.58□□□□□ -0.56
CTSA-207ENST00000484855 IGKV3OR2-268A0A0C4DH90 116 aa11.57□□□□□ -0.56
CTSA-207ENST00000484855 Q6ZTC4 211 aa11.57□□□□□ -0.56
CTSA-207ENST00000484855 SPATA25Q9BR10 227 aa11.57□□□□□ -0.56
CTSA-207ENST00000484855 NBEAL1Q6ZS30 2694 aa11.57□□□□□ -0.56
CTSA-207ENST00000484855 FXYD2P54710 66 aa11.57□□□□□ -0.56
CTSA-207ENST00000484855 DEFB121Q5J5C9 76 aa11.57□□□□□ -0.56
CTSA-207ENST00000484855 A0A1B0GUV1 79 aa11.56□□□□□ -0.56
CTSA-207ENST00000484855 TENM3Q9P273 2699 aa11.56□□□□□ -0.56
CTSA-207ENST00000484855 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
CTSA-207ENST00000484855 PTTG1IPP53801 180 aa11.55□□□□□ -0.56
CTSA-207ENST00000484855 RBX1P62877 108 aa11.55□□□□□ -0.56
CTSA-207ENST00000484855 Q6ZVH6 145 aa11.55□□□□□ -0.56
CTSA-207ENST00000484855 TM2D2Q9BX73 214 aa11.55□□□□□ -0.56
CTSA-207ENST00000484855 MRAPQ8TCY5 172 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms