RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 AMN1Q8IY45 258 aa11.27□□□□□ -0.61
ATG4B-221ENST00000483778 CDC42SE2Q9NRR3 84 aa11.27□□□□□ -0.61
ATG4B-221ENST00000483778 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
ATG4B-221ENST00000483778 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
ATG4B-221ENST00000483778 AKAP14Q86UN6 197 aa11.26□□□□□ -0.61
ATG4B-221ENST00000483778 TSKUQ8WUA8 353 aa11.26□□□□□ -0.61
ATG4B-221ENST00000483778 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
ATG4B-221ENST00000483778 TMEM191AQ9H0A3 160 aa11.26□□□□□ -0.61
ATG4B-221ENST00000483778 SRP19P09132 144 aaKnown RBP11.25□□□□□ -0.61
ATG4B-221ENST00000483778 C7orf33Q8WU49 177 aa11.25□□□□□ -0.61
ATG4B-221ENST00000483778 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
ATG4B-221ENST00000483778 BTF3L4Q96K17 158 aa11.25□□□□□ -0.61
ATG4B-221ENST00000483778 EIF5A2Q9GZV4 153 aaKnown RBP11.25□□□□□ -0.61
ATG4B-221ENST00000483778 TNXBP22105 4242 aa11.24□□□□□ -0.61
ATG4B-221ENST00000483778 TRBV27A0A0K0K1C4 114 aa11.24□□□□□ -0.61
ATG4B-221ENST00000483778 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
ATG4B-221ENST00000483778 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
ATG4B-221ENST00000483778 ZNF664Q8N3J9 261 aa11.24□□□□□ -0.61
ATG4B-221ENST00000483778 MRAP2Q96G30 205 aa11.24□□□□□ -0.61
ATG4B-221ENST00000483778 OSTCQ9NRP0 149 aa11.24□□□□□ -0.61
ATG4B-221ENST00000483778 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
ATG4B-221ENST00000483778 ZNF727A8MUV8 499 aa11.23□□□□□ -0.61
ATG4B-221ENST00000483778 V9GYV3 84 aa11.23□□□□□ -0.61
ATG4B-221ENST00000483778 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
ATG4B-221ENST00000483778 NRACQ8N912 160 aa11.22□□□□□ -0.61
ATG4B-221ENST00000483778 NUP35Q8NFH5 326 aa11.22□□□□□ -0.61
ATG4B-221ENST00000483778 BORCS7Q96B45 105 aa11.22□□□□□ -0.61
ATG4B-221ENST00000483778 FAM210AQ96ND0 272 aa11.22□□□□□ -0.61
ATG4B-221ENST00000483778 SS18Q15532 418 aa11.21□□□□□ -0.61
ATG4B-221ENST00000483778 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.61
ATG4B-221ENST00000483778 CARD19Q96LW7 228 aa11.21□□□□□ -0.61
ATG4B-221ENST00000483778 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
ATG4B-221ENST00000483778 C9JQL5 133 aa11.2□□□□□ -0.62
ATG4B-221ENST00000483778 SYCNQ0VAF6 134 aa11.2□□□□□ -0.62
ATG4B-221ENST00000483778 C7orf77A4D0Y5 90 aa11.19□□□□□ -0.62
ATG4B-221ENST00000483778 VCYO14598 125 aa11.19□□□□□ -0.62
ATG4B-221ENST00000483778 IGLV4-69A0A075B6H9 119 aa11.18□□□□□ -0.62
ATG4B-221ENST00000483778 ISOC2Q96AB3 205 aa11.18□□□□□ -0.62
ATG4B-221ENST00000483778 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
ATG4B-221ENST00000483778 A0A1W2PNN7 141 aa11.17□□□□□ -0.62
ATG4B-221ENST00000483778 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
ATG4B-221ENST00000483778 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
ATG4B-221ENST00000483778 RIGQ13278 110 aa11.17□□□□□ -0.62
ATG4B-221ENST00000483778 MRPL51Q4U2R6 128 aaKnown RBP11.17□□□□□ -0.62
ATG4B-221ENST00000483778 FCER1GP30273 86 aa11.16□□□□□ -0.62
ATG4B-221ENST00000483778 CAMPP49913 170 aa11.16□□□□□ -0.62
ATG4B-221ENST00000483778 KRTAP10-8P60410 259 aa11.16□□□□□ -0.62
ATG4B-221ENST00000483778 SUMO2P61956 95 aaKnown RBP11.16□□□□□ -0.62
ATG4B-221ENST00000483778 RPL23P62829 140 aaKnown RBP11.16□□□□□ -0.62
ATG4B-221ENST00000483778 FAM104AQ969W3 186 aa11.16□□□□□ -0.62
ATG4B-221ENST00000483778 TRAV13-1A0A0B4J241 112 aa11.15□□□□□ -0.62
ATG4B-221ENST00000483778 PTTG1IPP53801 180 aa11.15□□□□□ -0.62
ATG4B-221ENST00000483778 SRSF3P84103 164 aaKnown RBP11.15□□□□□ -0.62
ATG4B-221ENST00000483778 GAGE2BQ13066 116 aa11.15□□□□□ -0.62
ATG4B-221ENST00000483778 TMEM241Q24JQ0 296 aa11.15□□□□□ -0.62
ATG4B-221ENST00000483778 Q6ZUT4 128 aa11.15□□□□□ -0.62
ATG4B-221ENST00000483778 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
ATG4B-221ENST00000483778 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
ATG4B-221ENST00000483778 A0A1B0GVG6 124 aa11.14□□□□□ -0.63
ATG4B-221ENST00000483778 C1orf196B1AJZ1 125 aa11.14□□□□□ -0.63
ATG4B-221ENST00000483778 FAM104BQ5XKR9 115 aa11.14□□□□□ -0.63
ATG4B-221ENST00000483778 CSDC2Q9Y534 153 aaKnown RBP11.14□□□□□ -0.63
ATG4B-221ENST00000483778 A0A0J9YXV3 536 aa11.13□□□□□ -0.63
ATG4B-221ENST00000483778 COX7A2LO14548 114 aa11.13□□□□□ -0.63
ATG4B-221ENST00000483778 OPRPNQ99935 248 aaPredicted RBP11.13□□□□□ -0.63
ATG4B-221ENST00000483778 LOC107984640A0A0U1RRK4 108 aa11.12□□□□□ -0.63
ATG4B-221ENST00000483778 MALP21145 153 aa11.12□□□□□ -0.63
ATG4B-221ENST00000483778 RPL39P62891 51 aaKnown RBP11.12□□□□□ -0.63
ATG4B-221ENST00000483778 ADIRFQ15847 76 aa11.12□□□□□ -0.63
ATG4B-221ENST00000483778 FAM74A3Q4VXF1 159 aa11.12□□□□□ -0.63
ATG4B-221ENST00000483778 SPINK6Q6UWN8 80 aa11.12□□□□□ -0.63
ATG4B-221ENST00000483778 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
ATG4B-221ENST00000483778 SMIM27A0A1W2PRY6 76 aa11.11□□□□□ -0.63
ATG4B-221ENST00000483778 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-221ENST00000483778 LRP2P98164 4655 aa11.11□□□□□ -0.63
ATG4B-221ENST00000483778 Q6ZRP5 223 aa11.1□□□□□ -0.63
ATG4B-221ENST00000483778 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
ATG4B-221ENST00000483778 KIR2DL4Q99706 377 aa11.1□□□□□ -0.63
ATG4B-221ENST00000483778 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
ATG4B-221ENST00000483778 PPP1R17O96001 155 aa11.09□□□□□ -0.63
ATG4B-221ENST00000483778 TRBV24-1A0A075B6N3 115 aa11.08□□□□□ -0.64
ATG4B-221ENST00000483778 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
ATG4B-221ENST00000483778 C9orf116Q5BN46 136 aaPredicted RBP11.08□□□□□ -0.64
ATG4B-221ENST00000483778 NAT8Q9UHE5 227 aa11.08□□□□□ -0.64
ATG4B-221ENST00000483778 PPP1R2P9O14990 202 aa11.07□□□□□ -0.64
ATG4B-221ENST00000483778 APOMO95445 188 aa11.07□□□□□ -0.64
ATG4B-221ENST00000483778 CKS2P33552 79 aa11.07□□□□□ -0.64
ATG4B-221ENST00000483778 C2orf48Q96LS8 159 aa11.07□□□□□ -0.64
ATG4B-221ENST00000483778 C20orf78Q9BR46 151 aa11.07□□□□□ -0.64
ATG4B-221ENST00000483778 PKIGQ9Y2B9 76 aa11.07□□□□□ -0.64
ATG4B-221ENST00000483778 NPYP01303 97 aa11.06□□□□□ -0.64
ATG4B-221ENST00000483778 C10orf25Q5T742 122 aa11.06□□□□□ -0.64
ATG4B-221ENST00000483778 MRPL54Q6P161 138 aaKnown RBP11.06□□□□□ -0.64
ATG4B-221ENST00000483778 PHF5AQ7RTV0 110 aaKnown RBP11.06□□□□□ -0.64
ATG4B-221ENST00000483778 PSORS1C2Q9UIG4 136 aa11.06□□□□□ -0.64
ATG4B-221ENST00000483778 LINC00862A6NCI5 91 aa11.05□□□□□ -0.64
ATG4B-221ENST00000483778 D6R8Y8 96 aa11.05□□□□□ -0.64
ATG4B-221ENST00000483778 TCAPO15273 167 aa11.05□□□□□ -0.64
ATG4B-221ENST00000483778 RPL32P62910 135 aaKnown RBP11.05□□□□□ -0.64
ATG4B-221ENST00000483778 SPAG11BQ08648 103 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms