RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 LINC00474Q9P2X8 69 aa12.1□□□□□ -0.47
CHPF2-203ENST00000482173 PKIGQ9Y2B9 76 aa12.1□□□□□ -0.47
CHPF2-203ENST00000482173 BLOC1S1P78537 153 aa12.09□□□□□ -0.47
CHPF2-203ENST00000482173 CT83Q5H943 113 aa12.09□□□□□ -0.47
CHPF2-203ENST00000482173 CARD19Q96LW7 228 aa12.09□□□□□ -0.47
CHPF2-203ENST00000482173 A0A1B0GUT8 65 aa12.08□□□□□ -0.48
CHPF2-203ENST00000482173 POLR2KP53803 58 aaKnown RBP12.08□□□□□ -0.48
CHPF2-203ENST00000482173 FAM210AQ96ND0 272 aa12.08□□□□□ -0.48
CHPF2-203ENST00000482173 CDC42SE2Q9NRR3 84 aa12.08□□□□□ -0.48
CHPF2-203ENST00000482173 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
CHPF2-203ENST00000482173 CD164L2Q6UWJ8 174 aa12.07□□□□□ -0.48
CHPF2-203ENST00000482173 ALKAL2Q6UX46 152 aa12.07□□□□□ -0.48
CHPF2-203ENST00000482173 MRPL52Q86TS9 123 aaKnown RBP12.07□□□□□ -0.48
CHPF2-203ENST00000482173 ZNF664Q8N3J9 261 aa12.07□□□□□ -0.48
CHPF2-203ENST00000482173 TMEM191AQ9H0A3 160 aa12.07□□□□□ -0.48
CHPF2-203ENST00000482173 HIGD1CA8MV81 97 aa12.06□□□□□ -0.48
CHPF2-203ENST00000482173 RAB4AP20338 218 aa12.06□□□□□ -0.48
CHPF2-203ENST00000482173 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
CHPF2-203ENST00000482173 TSKUQ8WUA8 353 aa12.06□□□□□ -0.48
CHPF2-203ENST00000482173 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
CHPF2-203ENST00000482173 SMIM7Q9BQ49 75 aa12.05□□□□□ -0.48
CHPF2-203ENST00000482173 C7orf77A4D0Y5 90 aa12.04□□□□□ -0.48
CHPF2-203ENST00000482173 SPINK6Q6UWN8 80 aa12.04□□□□□ -0.48
CHPF2-203ENST00000482173 LINC01551Q86U37 167 aa12.04□□□□□ -0.48
CHPF2-203ENST00000482173 AMN1Q8IY45 258 aa12.04□□□□□ -0.48
CHPF2-203ENST00000482173 TNXBP22105 4242 aa12.03□□□□□ -0.48
CHPF2-203ENST00000482173 ODF1Q14990 250 aa12.03□□□□□ -0.48
CHPF2-203ENST00000482173 EIF5A2Q9GZV4 153 aaKnown RBP12.03□□□□□ -0.48
CHPF2-203ENST00000482173 A0A0J9YXV3 536 aa12.02□□□□□ -0.49
CHPF2-203ENST00000482173 VCYO14598 125 aa12.02□□□□□ -0.49
CHPF2-203ENST00000482173 FCER1GP30273 86 aa12.02□□□□□ -0.49
CHPF2-203ENST00000482173 CAMPP49913 170 aa12.02□□□□□ -0.49
CHPF2-203ENST00000482173 REG3GQ6UW15 175 aa12.02□□□□□ -0.49
CHPF2-203ENST00000482173 Q6ZRP5 223 aa12.02□□□□□ -0.49
CHPF2-203ENST00000482173 OSTCQ9NRP0 149 aa12.02□□□□□ -0.49
CHPF2-203ENST00000482173 ZNF727A8MUV8 499 aa12.01□□□□□ -0.49
CHPF2-203ENST00000482173 SMKR1H3BMG3 65 aa12.01□□□□□ -0.49
CHPF2-203ENST00000482173 MALP21145 153 aa12.01□□□□□ -0.49
CHPF2-203ENST00000482173 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
CHPF2-203ENST00000482173 ISOC2Q96AB3 205 aa12.01□□□□□ -0.49
CHPF2-203ENST00000482173 IGLV4-69A0A075B6H9 119 aa12□□□□□ -0.49
CHPF2-203ENST00000482173 C1orf196B1AJZ1 125 aa12□□□□□ -0.49
CHPF2-203ENST00000482173 PTTG1IPP53801 180 aa12□□□□□ -0.49
CHPF2-203ENST00000482173 KRTAP10-8P60410 259 aa12□□□□□ -0.49
CHPF2-203ENST00000482173 SRSF9Q13242 221 aaKnown RBP eCLIP12□□□□□ -0.49
CHPF2-203ENST00000482173 RIGQ13278 110 aa12□□□□□ -0.49
CHPF2-203ENST00000482173 LOC107984640A0A0U1RRK4 108 aa11.99□□□□□ -0.49
CHPF2-203ENST00000482173 COX7A2LO14548 114 aa11.99□□□□□ -0.49
CHPF2-203ENST00000482173 AKAP14Q86UN6 197 aa11.99□□□□□ -0.49
CHPF2-203ENST00000482173 PPP1R17O96001 155 aa11.98□□□□□ -0.49
CHPF2-203ENST00000482173 SUMO2P61956 95 aaKnown RBP11.98□□□□□ -0.49
CHPF2-203ENST00000482173 SMAGPQ0VAQ4 97 aa11.98□□□□□ -0.49
CHPF2-203ENST00000482173 RNASE13Q5GAN3 156 aaKnown RBP11.98□□□□□ -0.49
CHPF2-203ENST00000482173 NUP35Q8NFH5 326 aa11.98□□□□□ -0.49
CHPF2-203ENST00000482173 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
CHPF2-203ENST00000482173 NRACQ8N912 160 aa11.97□□□□□ -0.49
CHPF2-203ENST00000482173 CAMK2N2Q96S95 79 aa11.97□□□□□ -0.49
CHPF2-203ENST00000482173 KIR2DL4Q99706 377 aa11.97□□□□□ -0.49
CHPF2-203ENST00000482173 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
CHPF2-203ENST00000482173 V9GYV3 84 aa11.97□□□□□ -0.49
CHPF2-203ENST00000482173 TRAV13-1A0A0B4J241 112 aa11.96□□□□□ -0.49
CHPF2-203ENST00000482173 A0A1W2PNN7 141 aa11.96□□□□□ -0.49
CHPF2-203ENST00000482173 SRP19P09132 144 aaKnown RBP11.96□□□□□ -0.49
CHPF2-203ENST00000482173 C5orf38Q86SI9 138 aa11.95□□□□□ -0.5
CHPF2-203ENST00000482173 LRP2P98164 4655 aa11.95□□□□□ -0.5
CHPF2-203ENST00000482173 APOMO95445 188 aa11.94□□□□□ -0.5
CHPF2-203ENST00000482173 C2orf48Q96LS8 159 aa11.94□□□□□ -0.5
CHPF2-203ENST00000482173 hCG_2014768A0A024R1R8 64 aa11.93□□□□□ -0.5
CHPF2-203ENST00000482173 PPP1R2P9O14990 202 aa11.93□□□□□ -0.5
CHPF2-203ENST00000482173 MRPL51Q4U2R6 128 aaKnown RBP11.93□□□□□ -0.5
CHPF2-203ENST00000482173 Q6ZUT4 128 aa11.93□□□□□ -0.5
CHPF2-203ENST00000482173 NAT8BQ9UHF3 227 aa11.93□□□□□ -0.5
CHPF2-203ENST00000482173 TMEM241Q24JQ0 296 aa11.92□□□□□ -0.5
CHPF2-203ENST00000482173 C9orf116Q5BN46 136 aaPredicted RBP11.92□□□□□ -0.5
CHPF2-203ENST00000482173 FAM104BQ5XKR9 115 aa11.92□□□□□ -0.5
CHPF2-203ENST00000482173 TMEM18Q96B42 140 aa11.92□□□□□ -0.5
CHPF2-203ENST00000482173 TIMM21Q9BVV7 248 aa11.92□□□□□ -0.5
CHPF2-203ENST00000482173 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.91□□□□□ -0.5
CHPF2-203ENST00000482173 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
CHPF2-203ENST00000482173 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
CHPF2-203ENST00000482173 RPL23P62829 140 aaKnown RBP11.9□□□□□ -0.5
CHPF2-203ENST00000482173 SPAG11BQ08648 103 aa11.9□□□□□ -0.5
CHPF2-203ENST00000482173 PSORS1C2Q9UIG4 136 aa11.9□□□□□ -0.5
CHPF2-203ENST00000482173 MT-ND6P03923 174 aa11.89□□□□□ -0.51
CHPF2-203ENST00000482173 FAM74A3Q4VXF1 159 aa11.89□□□□□ -0.51
CHPF2-203ENST00000482173 C20orf78Q9BR46 151 aa11.89□□□□□ -0.51
CHPF2-203ENST00000482173 LINC00862A6NCI5 91 aa11.88□□□□□ -0.51
CHPF2-203ENST00000482173 CKS2P33552 79 aa11.88□□□□□ -0.51
CHPF2-203ENST00000482173 ADIRFQ15847 76 aa11.88□□□□□ -0.51
CHPF2-203ENST00000482173 RNF151Q2KHN1 245 aa11.88□□□□□ -0.51
CHPF2-203ENST00000482173 TRBV24-1A0A075B6N3 115 aa11.87□□□□□ -0.51
CHPF2-203ENST00000482173 SMIM27A0A1W2PRY6 76 aa11.87□□□□□ -0.51
CHPF2-203ENST00000482173 RPL39P62891 51 aaKnown RBP11.87□□□□□ -0.51
CHPF2-203ENST00000482173 PHF5AQ7RTV0 110 aaKnown RBP11.87□□□□□ -0.51
CHPF2-203ENST00000482173 TCAPO15273 167 aa11.86□□□□□ -0.51
CHPF2-203ENST00000482173 RPL32P62910 135 aaKnown RBP11.86□□□□□ -0.51
CHPF2-203ENST00000482173 C1orf137Q5JT78 98 aa11.86□□□□□ -0.51
CHPF2-203ENST00000482173 OR10D4PQ8NGN7 298 aa11.86□□□□□ -0.51
CHPF2-203ENST00000482173 ORAOV1Q8WV07 137 aa11.86□□□□□ -0.51
CHPF2-203ENST00000482173 A0A1B0GW15 77 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms