RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 TMEM189A5PLL7 270 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 C19orf71A6NCJ1 209 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 H3BMM0 161 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 M0R2Z0 102 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 CD7P09564 240 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 HLA-DRB4P13762 266 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 ZNF80P51504 273 aaPredicted RBP1.88□□□□□ -2.11
CBX3-207ENST00000481300 FXYD7P58549 80 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 RPS20P60866 119 aaKnown RBP1.88□□□□□ -2.11
CBX3-207ENST00000481300 IBA57Q5T440 356 aaKnown RBP1.88□□□□□ -2.11
CBX3-207ENST00000481300 GDF5OSQ5U4N7 250 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 LINC00322Q6ZN03 302 aaPredicted RBP1.88□□□□□ -2.11
CBX3-207ENST00000481300 ADM2Q7Z4H4 148 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 ZNF664Q8N3J9 261 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 DEFB125Q8N687 156 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 ZFAND2AQ8N6M9 145 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 TSKUQ8WUA8 353 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 ODF3Q96PU9 254 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 IMMP2LQ96T52 175 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 TM2D3Q9BRN9 247 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 TUBA4BQ9H853 241 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 IL36BQ9NZH7 164 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 NAGKQ9UJ70 344 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 URGCP-MRPS24S4R325 110 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 V9GYV3 84 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 HLA-DRB4X5D2U9 266 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 C2CD3Q4AC94 2353 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 MXRA5Q9NR99 2828 aa1.88□□□□□ -2.11
CBX3-207ENST00000481300 ATRQ13535 2644 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 NSD1Q96L73 2696 aaPredicted RBP1.87□□□□□ -2.11
CBX3-207ENST00000481300 SETD2Q9BYW2 2564 aaPredicted RBP1.87□□□□□ -2.11
CBX3-207ENST00000481300 CELSR1Q9NYQ6 3014 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 TRBV24-1A0A075B6N3 115 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 TRAV12-2A0A075B6T6 113 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 TRAV9-1A0A075B6T8 112 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 TGIF2-C20orf24A0A0A6YYL0 155 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 TRAV12-3A0A0B4J271 114 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 SMIM27A0A1W2PRY6 76 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 C7orf71A4D174 169 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 GRIFINA4D1Z8 144 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 A8MTW9 85 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 HIGD1CA8MV81 97 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 SPINK4O60575 86 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 GZMBP10144 247 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 CR1P17927 2039 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 RPL19P84098 196 aaKnown RBP1.87□□□□□ -2.11
CBX3-207ENST00000481300 ELOBQ15370 118 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 TAL2Q16559 108 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 SPINK13Q1W4C9 94 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 Q6AWC8 147 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 MRPL54Q6P161 138 aaKnown RBP1.87□□□□□ -2.11
CBX3-207ENST00000481300 LYZL1Q6UWQ5 148 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 AMTNQ6UX39 209 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 Q6ZQT7 251 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 FA2HQ7L5A8 372 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 FER1L6-AS1Q8NA97 138 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 NUP35Q8NFH5 326 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 BTF3L4Q96K17 158 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 YPEL4Q96NS1 127 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 LINC01587Q99440 93 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 NAT8BQ9UHF3 227 aa1.87□□□□□ -2.11
CBX3-207ENST00000481300 CHTOPQ9Y3Y2 248 aaKnown RBP1.87□□□□□ -2.11
CBX3-207ENST00000481300 TIMM8BQ9Y5J9 83 aaPredicted RBP1.87□□□□□ -2.11
CBX3-207ENST00000481300 TEP1Q99973 2627 aaKnown RBP1.87□□□□□ -2.11
CBX3-207ENST00000481300 DSCAML1Q8TD84 2053 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 MUC21A0A0G2JKD1 596 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 MUC21A0A140T8X8 626 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 A0A1B0GUT8 65 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 A0A1B0GW15 77 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 A0A1W2PNN7 141 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 C1orf196B1AJZ1 125 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 F2Z2F3 143 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 CRXO43186 299 aaPredicted RBP1.86□□□□□ -2.11
CBX3-207ENST00000481300 GNRH2O43555 120 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 TYMSP04818 313 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 S100A8P05109 93 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 CXCL1P09341 107 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 ARMS2P0C7Q2 107 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 P0C880 135 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 IGLC6P0CF74 106 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 INAFM2P0DMQ5 153 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 HTN1P15515 57 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 S100A4P26447 101 aaKnown RBP1.86□□□□□ -2.11
CBX3-207ENST00000481300 ASIPP42127 132 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 FOXA3P55318 350 aaPredicted RBP1.86□□□□□ -2.11
CBX3-207ENST00000481300 RAB4BP61018 213 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 FABP9Q0Z7S8 132 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 ATP5L2Q7Z4Y8 100 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 BORCS7Q96B45 105 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 TMEM208Q9BTX3 173 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 WFDC10AQ9H1F0 79 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 WNK1Q9H4A3 2382 aa1.86□□□□□ -2.11
CBX3-207ENST00000481300 NF1P21359 2839 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 NIPBLQ6KC79 2804 aaeCLIP1.85□□□□□ -2.11
CBX3-207ENST00000481300 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 A0A1B0GXF2 115 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 H3BVH4 76 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 M0R381 172 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 MT-ND6P03923 174 aa1.85□□□□□ -2.11
CBX3-207ENST00000481300 TRGC2P03986 189 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms