RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 GNG4P50150 75 aa9.73□□□□□ -0.85
DDX56-210ENST00000479440 MEF2BQ02080 365 aaPredicted RBP9.73□□□□□ -0.85
DDX56-210ENST00000479440 TEX261Q6UWH6 196 aa9.73□□□□□ -0.85
DDX56-210ENST00000479440 SMIM15Q7Z3B0 74 aa9.73□□□□□ -0.85
DDX56-210ENST00000479440 C9orf62Q8N4C0 152 aa9.73□□□□□ -0.85
DDX56-210ENST00000479440 CNFNQ9BYD5 112 aa9.73□□□□□ -0.85
DDX56-210ENST00000479440 MANBALQ9NQG1 85 aa9.73□□□□□ -0.85
DDX56-210ENST00000479440 BIN3Q9NQY0 253 aa9.73□□□□□ -0.85
DDX56-210ENST00000479440 TRAV1-1A0A0B4J248 108 aa9.72□□□□□ -0.85
DDX56-210ENST00000479440 I3L3M4 83 aa9.72□□□□□ -0.85
DDX56-210ENST00000479440 PMCHP20382 165 aa9.72□□□□□ -0.85
DDX56-210ENST00000479440 RPL13AP40429 203 aaKnown RBP9.72□□□□□ -0.85
DDX56-210ENST00000479440 MRAP2Q96G30 205 aa9.72□□□□□ -0.85
DDX56-210ENST00000479440 H2AFB1P0C5Y9 115 aa9.71□□□□□ -0.86
DDX56-210ENST00000479440 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
DDX56-210ENST00000479440 COX7A2LO14548 114 aa9.7□□□□□ -0.86
DDX56-210ENST00000479440 CCL20P78556 96 aa9.7□□□□□ -0.86
DDX56-210ENST00000479440 MRPL52Q86TS9 123 aaKnown RBP9.7□□□□□ -0.86
DDX56-210ENST00000479440 C2orf48Q96LS8 159 aa9.7□□□□□ -0.86
DDX56-210ENST00000479440 FAM210AQ96ND0 272 aa9.7□□□□□ -0.86
DDX56-210ENST00000479440 CDC42SE2Q9NRR3 84 aa9.7□□□□□ -0.86
DDX56-210ENST00000479440 GNG13Q9P2W3 67 aa9.7□□□□□ -0.86
DDX56-210ENST00000479440 A0A087WZ39 114 aa9.69□□□□□ -0.86
DDX56-210ENST00000479440 BCL2L11O43521 198 aa9.69□□□□□ -0.86
DDX56-210ENST00000479440 ESDP10768 282 aa9.69□□□□□ -0.86
DDX56-210ENST00000479440 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
DDX56-210ENST00000479440 KRTAP1-4P0C5Y4 121 aa9.68□□□□□ -0.86
DDX56-210ENST00000479440 TRBV6-5A0A0K0K1A5 114 aa9.67□□□□□ -0.86
DDX56-210ENST00000479440 G3V3Q6 166 aa9.67□□□□□ -0.86
DDX56-210ENST00000479440 RNF151Q2KHN1 245 aa9.67□□□□□ -0.86
DDX56-210ENST00000479440 TMEM242Q9NWH2 141 aa9.67□□□□□ -0.86
DDX56-210ENST00000479440 C7orf77A4D0Y5 90 aa9.66□□□□□ -0.86
DDX56-210ENST00000479440 RAB19A4D1S5 217 aa9.66□□□□□ -0.86
DDX56-210ENST00000479440 TSHBP01222 138 aa9.66□□□□□ -0.86
DDX56-210ENST00000479440 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
DDX56-210ENST00000479440 RPP21Q9H633 154 aaKnown RBP9.66□□□□□ -0.86
DDX56-210ENST00000479440 PDE6DO43924 150 aa9.65□□□□□ -0.86
DDX56-210ENST00000479440 ZNF345Q14585 488 aa9.65□□□□□ -0.86
DDX56-210ENST00000479440 NUDT10Q8NFP7 164 aa9.65□□□□□ -0.86
DDX56-210ENST00000479440 NUDT11Q96G61 164 aa9.65□□□□□ -0.86
DDX56-210ENST00000479440 OPRPNQ99935 248 aaPredicted RBP9.65□□□□□ -0.86
DDX56-210ENST00000479440 TRBV20OR9-2A0A075B6H5 130 aa9.64□□□□□ -0.87
DDX56-210ENST00000479440 SMAGPQ0VAQ4 97 aa9.64□□□□□ -0.87
DDX56-210ENST00000479440 ST20Q9HBF5 79 aa9.64□□□□□ -0.87
DDX56-210ENST00000479440 FAM19A5Q7Z5A7 132 aaPredicted RBP9.63□□□□□ -0.87
DDX56-210ENST00000479440 OR10D4PQ8NGN7 298 aa9.63□□□□□ -0.87
DDX56-210ENST00000479440 IMMP2LQ96T52 175 aa9.63□□□□□ -0.87
DDX56-210ENST00000479440 MRPL35Q9NZE8 188 aaKnown RBP9.63□□□□□ -0.87
DDX56-210ENST00000479440 CARHSP1Q9Y2V2 147 aaKnown RBP9.63□□□□□ -0.87
DDX56-210ENST00000479440 TEX46H3BTG2 121 aa9.62□□□□□ -0.87
DDX56-210ENST00000479440 FOXA3P55318 350 aaPredicted RBP9.62□□□□□ -0.87
DDX56-210ENST00000479440 UBE2BP63146 152 aa9.62□□□□□ -0.87
DDX56-210ENST00000479440 MED9Q9NWA0 146 aa9.62□□□□□ -0.87
DDX56-210ENST00000479440 KANTRA0A1W2PQU2 76 aa9.61□□□□□ -0.87
DDX56-210ENST00000479440 F8WDY8 70 aa9.61□□□□□ -0.87
DDX56-210ENST00000479440 C5orf38Q86SI9 138 aa9.61□□□□□ -0.87
DDX56-210ENST00000479440 KRTAP11-1Q8IUC1 163 aa9.61□□□□□ -0.87
DDX56-210ENST00000479440 RNASE7Q9H1E1 156 aaKnown RBP9.61□□□□□ -0.87
DDX56-210ENST00000479440 CSDC2Q9Y534 153 aaKnown RBP9.61□□□□□ -0.87
DDX56-210ENST00000479440 TRAV13-1A0A0B4J241 112 aa9.6□□□□□ -0.87
DDX56-210ENST00000479440 FAM168BA1KXE4 195 aa9.6□□□□□ -0.87
DDX56-210ENST00000479440 TRBV27A0A0K0K1C4 114 aa9.59□□□□□ -0.87
DDX56-210ENST00000479440 M0QXV9 152 aa9.59□□□□□ -0.87
DDX56-210ENST00000479440 NDUFA1O15239 70 aa9.59□□□□□ -0.87
DDX56-210ENST00000479440 FCER1GP30273 86 aa9.59□□□□□ -0.87
DDX56-210ENST00000479440 TLX1NBP0CAT3 122 aa9.58□□□□□ -0.88
DDX56-210ENST00000479440 RNASE13Q5GAN3 156 aaKnown RBP9.58□□□□□ -0.88
DDX56-210ENST00000479440 BORCS7Q96B45 105 aa9.58□□□□□ -0.88
DDX56-210ENST00000479440 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
DDX56-210ENST00000479440 TSPAN13O95857 204 aa9.57□□□□□ -0.88
DDX56-210ENST00000479440 POLR2KP53803 58 aaKnown RBP9.57□□□□□ -0.88
DDX56-210ENST00000479440 ORAOV1Q8WV07 137 aa9.57□□□□□ -0.88
DDX56-210ENST00000479440 SMLR1H3BR10 107 aa9.56□□□□□ -0.88
DDX56-210ENST00000479440 K7EN84 100 aa9.56□□□□□ -0.88
DDX56-210ENST00000479440 Q6ZUT4 128 aa9.56□□□□□ -0.88
DDX56-210ENST00000479440 TMEM241Q24JQ0 296 aa9.55□□□□□ -0.88
DDX56-210ENST00000479440 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
DDX56-210ENST00000479440 TMEM18Q96B42 140 aa9.55□□□□□ -0.88
DDX56-210ENST00000479440 SMDT1Q9H4I9 107 aa9.55□□□□□ -0.88
DDX56-210ENST00000479440 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
DDX56-210ENST00000479440 KIR2DL4Q99706 377 aa9.54□□□□□ -0.88
DDX56-210ENST00000479440 HMSDA8MTL9 139 aa9.53□□□□□ -0.88
DDX56-210ENST00000479440 A8MWL6 223 aa9.53□□□□□ -0.88
DDX56-210ENST00000479440 VCYO14598 125 aa9.53□□□□□ -0.88
DDX56-210ENST00000479440 GATCO43716 136 aaKnown RBP9.53□□□□□ -0.88
DDX56-210ENST00000479440 ZNF861PO60384 105 aa9.52□□□□□ -0.89
DDX56-210ENST00000479440 TAGLN2P37802 199 aaKnown RBP9.52□□□□□ -0.89
DDX56-210ENST00000479440 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
DDX56-210ENST00000479440 TMEM191AQ9H0A3 160 aa9.52□□□□□ -0.89
DDX56-210ENST00000479440 C6orf48Q9UBA6 75 aa9.52□□□□□ -0.89
DDX56-210ENST00000479440 PPP1R17O96001 155 aa9.51□□□□□ -0.89
DDX56-210ENST00000479440 CT83Q5H943 113 aa9.51□□□□□ -0.89
DDX56-210ENST00000479440 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
DDX56-210ENST00000479440 UNQ6190/PRO20217Q6UXQ8 127 aa9.51□□□□□ -0.89
DDX56-210ENST00000479440 OCC1Q8TAD7 63 aa9.51□□□□□ -0.89
DDX56-210ENST00000479440 NUPR1O60356 82 aa9.5□□□□□ -0.89
DDX56-210ENST00000479440 RAB4AP20338 218 aa9.5□□□□□ -0.89
DDX56-210ENST00000479440 FAM231DQ6ZW35 169 aa9.5□□□□□ -0.89
DDX56-210ENST00000479440 KRTAP7-1Q8IUC3 87 aa9.5□□□□□ -0.89
DDX56-210ENST00000479440 MUC17Q685J3 4493 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms