RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ODF1Q14990 250 aa8.26□□□□□ -1.09
VCL-205ENST00000478896 Q6ZRP5 223 aa8.26□□□□□ -1.09
VCL-205ENST00000478896 TNXBP22105 4242 aa8.26□□□□□ -1.09
VCL-205ENST00000478896 TRBV6-5A0A0K0K1A5 114 aa8.25□□□□□ -1.09
VCL-205ENST00000478896 C7orf77A4D0Y5 90 aa8.25□□□□□ -1.09
VCL-205ENST00000478896 TSHBP01222 138 aa8.25□□□□□ -1.09
VCL-205ENST00000478896 ESDP10768 282 aa8.25□□□□□ -1.09
VCL-205ENST00000478896 MALP21145 153 aa8.25□□□□□ -1.09
VCL-205ENST00000478896 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
VCL-205ENST00000478896 CD164L2Q6UWJ8 174 aa8.25□□□□□ -1.09
VCL-205ENST00000478896 ISOC2Q96AB3 205 aa8.25□□□□□ -1.09
VCL-205ENST00000478896 GAS8-AS1O95177 125 aa8.24□□□□□ -1.09
VCL-205ENST00000478896 CAMPP49913 170 aa8.24□□□□□ -1.09
VCL-205ENST00000478896 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
VCL-205ENST00000478896 FAM231DQ6ZW35 169 aa8.24□□□□□ -1.09
VCL-205ENST00000478896 TMEM250H0YL14 139 aa8.23□□□□□ -1.09
VCL-205ENST00000478896 PTTG1IPP53801 180 aa8.23□□□□□ -1.09
VCL-205ENST00000478896 CT83Q5H943 113 aa8.23□□□□□ -1.09
VCL-205ENST00000478896 TCTE3Q8IZS6 198 aa8.23□□□□□ -1.09
VCL-205ENST00000478896 ZNF664Q8N3J9 261 aa8.23□□□□□ -1.09
VCL-205ENST00000478896 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
VCL-205ENST00000478896 CDC42SE2Q9NRR3 84 aa8.23□□□□□ -1.09
VCL-205ENST00000478896 LOC107984640A0A0U1RRK4 108 aa8.22□□□□□ -1.09
VCL-205ENST00000478896 A0A1B0GUT8 65 aa8.22□□□□□ -1.09
VCL-205ENST00000478896 HIGD1CA8MV81 97 aa8.22□□□□□ -1.09
VCL-205ENST00000478896 FCER1GP30273 86 aa8.22□□□□□ -1.09
VCL-205ENST00000478896 MRPL52Q86TS9 123 aaKnown RBP8.22□□□□□ -1.09
VCL-205ENST00000478896 IGLV4-69A0A075B6H9 119 aa8.21□□□□□ -1.1
VCL-205ENST00000478896 BLOC1S1P78537 153 aa8.21□□□□□ -1.1
VCL-205ENST00000478896 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
VCL-205ENST00000478896 AMN1Q8IY45 258 aa8.21□□□□□ -1.1
VCL-205ENST00000478896 CAMK2N2Q96S95 79 aa8.21□□□□□ -1.1
VCL-205ENST00000478896 TMEM191AQ9H0A3 160 aa8.21□□□□□ -1.1
VCL-205ENST00000478896 TRBV27A0A0K0K1C4 114 aa8.2□□□□□ -1.1
VCL-205ENST00000478896 C1orf196B1AJZ1 125 aa8.2□□□□□ -1.1
VCL-205ENST00000478896 COX7A2LO14548 114 aa8.2□□□□□ -1.1
VCL-205ENST00000478896 RAB4AP20338 218 aa8.2□□□□□ -1.1
VCL-205ENST00000478896 POLR2KP53803 58 aaKnown RBP8.2□□□□□ -1.1
VCL-205ENST00000478896 RPL18AQ02543 176 aaKnown RBP8.2□□□□□ -1.1
VCL-205ENST00000478896 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
VCL-205ENST00000478896 TSKUQ8WUA8 353 aa8.2□□□□□ -1.1
VCL-205ENST00000478896 SMIM7Q9BQ49 75 aa8.2□□□□□ -1.1
VCL-205ENST00000478896 LRP2P98164 4655 aa8.2□□□□□ -1.1
VCL-205ENST00000478896 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
VCL-205ENST00000478896 APOMO95445 188 aa8.19□□□□□ -1.1
VCL-205ENST00000478896 KRTAP10-8P60410 259 aa8.19□□□□□ -1.1
VCL-205ENST00000478896 SRSF9Q13242 221 aaKnown RBP eCLIP8.19□□□□□ -1.1
VCL-205ENST00000478896 ALKAL2Q6UX46 152 aa8.19□□□□□ -1.1
VCL-205ENST00000478896 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
VCL-205ENST00000478896 KIR2DL4Q99706 377 aa8.19□□□□□ -1.1
VCL-205ENST00000478896 SMKR1H3BMG3 65 aa8.18□□□□□ -1.1
VCL-205ENST00000478896 VCYO14598 125 aa8.18□□□□□ -1.1
VCL-205ENST00000478896 MT-ND6P03923 174 aa8.18□□□□□ -1.1
VCL-205ENST00000478896 EIF5A2Q9GZV4 153 aaKnown RBP8.18□□□□□ -1.1
VCL-205ENST00000478896 UBE2D4Q9Y2X8 147 aa8.18□□□□□ -1.1
VCL-205ENST00000478896 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
VCL-205ENST00000478896 ZNF727A8MUV8 499 aa8.17□□□□□ -1.1
VCL-205ENST00000478896 PPP1R17O96001 155 aa8.17□□□□□ -1.1
VCL-205ENST00000478896 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
VCL-205ENST00000478896 RIGQ13278 110 aa8.17□□□□□ -1.1
VCL-205ENST00000478896 C9orf116Q5BN46 136 aaPredicted RBP8.17□□□□□ -1.1
VCL-205ENST00000478896 LINC01551Q86U37 167 aa8.17□□□□□ -1.1
VCL-205ENST00000478896 TMEM18Q96B42 140 aa8.17□□□□□ -1.1
VCL-205ENST00000478896 SPAG11BQ08648 103 aa8.16□□□□□ -1.1
VCL-205ENST00000478896 Q6ZUT4 128 aa8.16□□□□□ -1.1
VCL-205ENST00000478896 C5orf38Q86SI9 138 aa8.16□□□□□ -1.1
VCL-205ENST00000478896 C2orf48Q96LS8 159 aa8.16□□□□□ -1.1
VCL-205ENST00000478896 OSTCQ9NRP0 149 aa8.16□□□□□ -1.1
VCL-205ENST00000478896 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
VCL-205ENST00000478896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.15□□□□□ -1.1
VCL-205ENST00000478896 PPP1R2P9O14990 202 aa8.15□□□□□ -1.1
VCL-205ENST00000478896 C1orf137Q5JT78 98 aa8.15□□□□□ -1.1
VCL-205ENST00000478896 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.1
VCL-205ENST00000478896 PSORS1C2Q9UIG4 136 aa8.15□□□□□ -1.1
VCL-205ENST00000478896 RNF213Q63HN8 5207 aa8.15□□□□□ -1.11
VCL-205ENST00000478896 PHF5AQ7RTV0 110 aaKnown RBP8.14□□□□□ -1.11
VCL-205ENST00000478896 NRACQ8N912 160 aa8.14□□□□□ -1.11
VCL-205ENST00000478896 AKAP14Q86UN6 197 aa8.13□□□□□ -1.11
VCL-205ENST00000478896 NAT8BQ9UHF3 227 aa8.13□□□□□ -1.11
VCL-205ENST00000478896 V9GYV3 84 aa8.13□□□□□ -1.11
VCL-205ENST00000478896 OR10D4PQ8NGN7 298 aa8.12□□□□□ -1.11
VCL-205ENST00000478896 ORAOV1Q8WV07 137 aa8.12□□□□□ -1.11
VCL-205ENST00000478896 MRPL51Q4U2R6 128 aaKnown RBP8.11□□□□□ -1.11
VCL-205ENST00000478896 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
VCL-205ENST00000478896 NDUFA1O15239 70 aa8.1□□□□□ -1.11
VCL-205ENST00000478896 SRP19P09132 144 aaKnown RBP8.1□□□□□ -1.11
VCL-205ENST00000478896 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
VCL-205ENST00000478896 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
VCL-205ENST00000478896 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
VCL-205ENST00000478896 IMMP2LQ96T52 175 aa8.1□□□□□ -1.11
VCL-205ENST00000478896 MRPL35Q9NZE8 188 aaKnown RBP8.1□□□□□ -1.11
VCL-205ENST00000478896 A0A087WZ39 114 aa8.09□□□□□ -1.11
VCL-205ENST00000478896 LINC00862A6NCI5 91 aa8.09□□□□□ -1.11
VCL-205ENST00000478896 TCAPO15273 167 aa8.09□□□□□ -1.11
VCL-205ENST00000478896 CKS2P33552 79 aa8.09□□□□□ -1.11
VCL-205ENST00000478896 ADIRFQ15847 76 aa8.09□□□□□ -1.11
VCL-205ENST00000478896 DIRC1Q969H9 104 aa8.09□□□□□ -1.11
VCL-205ENST00000478896 C20orf78Q9BR46 151 aa8.09□□□□□ -1.11
VCL-205ENST00000478896 hCG_2014768A0A024R1R8 64 aa8.08□□□□□ -1.12
VCL-205ENST00000478896 F8WDY8 70 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms