RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SIVA1O15304 175 aa9.77□□□□□ -0.85
USP11-207ENST00000478596 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.85
USP11-207ENST00000478596 GCSHP23434 173 aa9.77□□□□□ -0.85
USP11-207ENST00000478596 GAGE6Q13070 117 aa9.77□□□□□ -0.85
USP11-207ENST00000478596 BAGE3Q86Y29 109 aa9.77□□□□□ -0.85
USP11-207ENST00000478596 C18orf32Q8TCD1 76 aa9.77□□□□□ -0.85
USP11-207ENST00000478596 TMEM18Q96B42 140 aa9.77□□□□□ -0.85
USP11-207ENST00000478596 OXTP01178 125 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 IGHV3-30P01768 117 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 IGHV3-33P01772 117 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 IGHV3-30-3P0DP02 117 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 IGHV3-30-5P0DP03 117 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 RAB5BP61020 215 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 SMAGPQ0VAQ4 97 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
USP11-207ENST00000478596 LAGE3Q14657 143 aa9.75□□□□□ -0.85
USP11-207ENST00000478596 LRP2P98164 4655 aa9.75□□□□□ -0.85
USP11-207ENST00000478596 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
USP11-207ENST00000478596 AP5S1Q9NUS5 200 aa9.74□□□□□ -0.85
USP11-207ENST00000478596 A0A087WTM6 91 aa9.73□□□□□ -0.85
USP11-207ENST00000478596 PRSS47A8MTI9 375 aa9.73□□□□□ -0.85
USP11-207ENST00000478596 K7EMI3 77 aa9.73□□□□□ -0.85
USP11-207ENST00000478596 DGAT2L7PQ6IED9 249 aa9.73□□□□□ -0.85
USP11-207ENST00000478596 CHCHD7Q9BUK0 85 aa9.73□□□□□ -0.85
USP11-207ENST00000478596 TRAV9-2A0A087WT02 112 aa9.72□□□□□ -0.85
USP11-207ENST00000478596 CRPP02741 224 aa9.72□□□□□ -0.85
USP11-207ENST00000478596 ANGP03950 147 aaKnown RBP9.72□□□□□ -0.85
USP11-207ENST00000478596 G0S2P27469 103 aa9.72□□□□□ -0.85
USP11-207ENST00000478596 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
USP11-207ENST00000478596 NIT1Q86X76 327 aa9.72□□□□□ -0.85
USP11-207ENST00000478596 OR5A1Q8NGJ0 315 aa9.72□□□□□ -0.85
USP11-207ENST00000478596 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
USP11-207ENST00000478596 H7C423 109 aa9.71□□□□□ -0.86
USP11-207ENST00000478596 HSBP1O75506 76 aa9.71□□□□□ -0.86
USP11-207ENST00000478596 DNAH10OSP0CZ25 163 aa9.71□□□□□ -0.86
USP11-207ENST00000478596 FGF6P10767 208 aa9.71□□□□□ -0.86
USP11-207ENST00000478596 LINC01556Q5JQF7 62 aa9.71□□□□□ -0.86
USP11-207ENST00000478596 C10orf126Q8N4M7 172 aa9.71□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BKO60814 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BJP06899 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 LINC00614P0C842 121 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BOP23527 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BBP33778 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BDP58876 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BCP62807 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST2H2BEQ16778 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.7□□□□□ -0.86
USP11-207ENST00000478596 CLPSL2Q6UWE3 100 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 C2orf66Q6UXQ4 117 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 Q8N3U1 123 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 Q8N976 141 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 C20orf203Q8NBC4 194 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BHQ93079 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BNQ99877 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 HIST1H2BMQ99879 126 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 DNAH8Q96JB1 4490 aa9.7□□□□□ -0.86
USP11-207ENST00000478596 IGKV3OR2-268A0A0C4DH90 116 aa9.69□□□□□ -0.86
USP11-207ENST00000478596 ESDP10768 282 aa9.69□□□□□ -0.86
USP11-207ENST00000478596 ZNF25P17030 456 aaPredicted RBP9.69□□□□□ -0.86
USP11-207ENST00000478596 RBX1P62877 108 aa9.69□□□□□ -0.86
USP11-207ENST00000478596 PMCHL1Q16048 86 aa9.69□□□□□ -0.86
USP11-207ENST00000478596 CHCHD1Q96BP2 118 aaKnown RBP9.69□□□□□ -0.86
USP11-207ENST00000478596 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
USP11-207ENST00000478596 SERF1AO75920 110 aa9.68□□□□□ -0.86
USP11-207ENST00000478596 HBDP02042 147 aa9.68□□□□□ -0.86
USP11-207ENST00000478596 Q0VG73 95 aa9.68□□□□□ -0.86
USP11-207ENST00000478596 Q9HAA7 133 aa9.68□□□□□ -0.86
USP11-207ENST00000478596 SPANXA1Q9NS26 97 aa9.68□□□□□ -0.86
USP11-207ENST00000478596 Q6ZN92 141 aa9.67□□□□□ -0.86
USP11-207ENST00000478596 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
USP11-207ENST00000478596 NDUFA6P56556 154 aa9.66□□□□□ -0.86
USP11-207ENST00000478596 Q6ZUT4 128 aa9.66□□□□□ -0.86
USP11-207ENST00000478596 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
USP11-207ENST00000478596 LINC00528Q8N1L1 170 aa9.66□□□□□ -0.86
USP11-207ENST00000478596 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
USP11-207ENST00000478596 SCGB3A1Q96QR1 104 aa9.66□□□□□ -0.86
USP11-207ENST00000478596 UBE2D4Q9Y2X8 147 aa9.66□□□□□ -0.86
USP11-207ENST00000478596 IGLV4-60A0A075B6I1 120 aa9.65□□□□□ -0.86
USP11-207ENST00000478596 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
USP11-207ENST00000478596 S100A6P06703 90 aa9.65□□□□□ -0.86
USP11-207ENST00000478596 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.86
USP11-207ENST00000478596 MRPL52Q86TS9 123 aaKnown RBP9.65□□□□□ -0.86
USP11-207ENST00000478596 LINC00269Q8N2A0 174 aa9.65□□□□□ -0.86
USP11-207ENST00000478596 TOMM6Q96B49 74 aa9.65□□□□□ -0.86
USP11-207ENST00000478596 URB1-AS1Q96HZ7 61 aa9.65□□□□□ -0.86
USP11-207ENST00000478596 A0A1B0GUV1 79 aa9.64□□□□□ -0.87
USP11-207ENST00000478596 K7EP13 123 aa9.64□□□□□ -0.87
USP11-207ENST00000478596 PAPPA-AS1Q5QFB9 102 aa9.64□□□□□ -0.87
USP11-207ENST00000478596 C2orf88Q9BSF0 95 aa9.64□□□□□ -0.87
USP11-207ENST00000478596 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
USP11-207ENST00000478596 FAM30AQ9NZY2 134 aa9.64□□□□□ -0.87
USP11-207ENST00000478596 IFITM10A6NMD0 228 aa9.63□□□□□ -0.87
USP11-207ENST00000478596 REG3AQ06141 175 aa9.63□□□□□ -0.87
USP11-207ENST00000478596 FAM19A2Q8N3H0 131 aa9.63□□□□□ -0.87
USP11-207ENST00000478596 RMI2Q96E14 147 aa9.63□□□□□ -0.87
USP11-207ENST00000478596 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
USP11-207ENST00000478596 PKHD1L1Q86WI1 4243 aa9.63□□□□□ -0.87
USP11-207ENST00000478596 IGLV5-52A0A0A0MRZ9 124 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms