RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 CCL25O15444 150 aa12.2□□□□□ -0.46
EPHB4-205ENST00000478459 FCER1GP30273 86 aa12.2□□□□□ -0.46
EPHB4-205ENST00000478459 CNBPP62633 177 aaKnown RBP12.2□□□□□ -0.46
EPHB4-205ENST00000478459 NRACQ8N912 160 aa12.2□□□□□ -0.46
EPHB4-205ENST00000478459 LRP1Q07954 4544 aaKnown RBP12.2□□□□□ -0.46
EPHB4-205ENST00000478459 IGHV3-64A0A075B6Q5 118 aa12.19□□□□□ -0.46
EPHB4-205ENST00000478459 SMIM27A0A1W2PRY6 76 aa12.19□□□□□ -0.46
EPHB4-205ENST00000478459 H7C423 109 aa12.19□□□□□ -0.46
EPHB4-205ENST00000478459 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
EPHB4-205ENST00000478459 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.18□□□□□ -0.46
EPHB4-205ENST00000478459 LINC00959A0A1B0GUT2 108 aa12.18□□□□□ -0.46
EPHB4-205ENST00000478459 C7orf77A4D0Y5 90 aa12.18□□□□□ -0.46
EPHB4-205ENST00000478459 FOXI1Q12951 378 aa12.18□□□□□ -0.46
EPHB4-205ENST00000478459 TRBV27A0A0K0K1C4 114 aa12.17□□□□□ -0.46
EPHB4-205ENST00000478459 VCYO14598 125 aa12.17□□□□□ -0.46
EPHB4-205ENST00000478459 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
EPHB4-205ENST00000478459 SUMO2P61956 95 aaKnown RBP12.17□□□□□ -0.46
EPHB4-205ENST00000478459 FAM104BQ5XKR9 115 aa12.17□□□□□ -0.46
EPHB4-205ENST00000478459 FAT3Q8TDW7 4589 aa12.16□□□□□ -0.46
EPHB4-205ENST00000478459 HNRNPA3P51991 378 aaKnown RBP12.16□□□□□ -0.46
EPHB4-205ENST00000478459 COX6A2Q02221 97 aa12.16□□□□□ -0.46
EPHB4-205ENST00000478459 CFAP161Q6P656 301 aa12.16□□□□□ -0.46
EPHB4-205ENST00000478459 ZNF664Q8N3J9 261 aa12.16□□□□□ -0.46
EPHB4-205ENST00000478459 CDC42SE2Q9NRR3 84 aa12.16□□□□□ -0.46
EPHB4-205ENST00000478459 IGKV2-24A0A0C4DH68 120 aa12.15□□□□□ -0.46
EPHB4-205ENST00000478459 CKS2P33552 79 aa12.15□□□□□ -0.46
EPHB4-205ENST00000478459 PRSS3P2Q8NHM4 247 aa12.15□□□□□ -0.46
EPHB4-205ENST00000478459 SS18Q15532 418 aa12.14□□□□□ -0.47
EPHB4-205ENST00000478459 A0A087WYN8 130 aa12.13□□□□□ -0.47
EPHB4-205ENST00000478459 KIR2DL4Q99706 377 aa12.13□□□□□ -0.47
EPHB4-205ENST00000478459 D6R8Y8 96 aa12.12□□□□□ -0.47
EPHB4-205ENST00000478459 Q6ZUT4 128 aa12.12□□□□□ -0.47
EPHB4-205ENST00000478459 MRPL52Q86TS9 123 aaKnown RBP12.12□□□□□ -0.47
EPHB4-205ENST00000478459 GVQW2A0A096LPI5 108 aaPredicted RBP12.11□□□□□ -0.47
EPHB4-205ENST00000478459 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
EPHB4-205ENST00000478459 NPYP01303 97 aa12.11□□□□□ -0.47
EPHB4-205ENST00000478459 RPL39P62891 51 aaKnown RBP12.11□□□□□ -0.47
EPHB4-205ENST00000478459 HBBP68871 147 aa12.11□□□□□ -0.47
EPHB4-205ENST00000478459 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
EPHB4-205ENST00000478459 SPACA4Q8TDM5 124 aa12.11□□□□□ -0.47
EPHB4-205ENST00000478459 SMDT1Q9H4I9 107 aa12.11□□□□□ -0.47
EPHB4-205ENST00000478459 UBE2D4Q9Y2X8 147 aa12.11□□□□□ -0.47
EPHB4-205ENST00000478459 TRAV13-1A0A0B4J241 112 aa12.1□□□□□ -0.47
EPHB4-205ENST00000478459 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
EPHB4-205ENST00000478459 TCAPO15273 167 aa12.09□□□□□ -0.47
EPHB4-205ENST00000478459 PPP1R17O96001 155 aa12.09□□□□□ -0.47
EPHB4-205ENST00000478459 OPRPNQ99935 248 aaPredicted RBP12.09□□□□□ -0.47
EPHB4-205ENST00000478459 A0A096LNI7 61 aa12.08□□□□□ -0.48
EPHB4-205ENST00000478459 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
EPHB4-205ENST00000478459 A0A1B0GXF2 115 aa12.08□□□□□ -0.48
EPHB4-205ENST00000478459 PPP1R2P9O14990 202 aa12.08□□□□□ -0.48
EPHB4-205ENST00000478459 CIRBPQ14011 172 aaKnown RBP12.08□□□□□ -0.48
EPHB4-205ENST00000478459 CD164L2Q6UWJ8 174 aa12.08□□□□□ -0.48
EPHB4-205ENST00000478459 A0A1B0GW15 77 aa12.07□□□□□ -0.48
EPHB4-205ENST00000478459 C5orf38Q86SI9 138 aa12.07□□□□□ -0.48
EPHB4-205ENST00000478459 SMIM2Q9BVW6 85 aa12.07□□□□□ -0.48
EPHB4-205ENST00000478459 LINC00862A6NCI5 91 aa12.06□□□□□ -0.48
EPHB4-205ENST00000478459 F8W036 122 aa12.06□□□□□ -0.48
EPHB4-205ENST00000478459 MALP21145 153 aa12.06□□□□□ -0.48
EPHB4-205ENST00000478459 CARD19Q96LW7 228 aa12.06□□□□□ -0.48
EPHB4-205ENST00000478459 C20orf78Q9BR46 151 aa12.06□□□□□ -0.48
EPHB4-205ENST00000478459 ZNF561-AS1K7EIQ3 104 aa12.05□□□□□ -0.48
EPHB4-205ENST00000478459 PHOX2AO14813 284 aa12.05□□□□□ -0.48
EPHB4-205ENST00000478459 RAB14P61106 215 aa12.05□□□□□ -0.48
EPHB4-205ENST00000478459 STPG4Q8N801 248 aa12.05□□□□□ -0.48
EPHB4-205ENST00000478459 TRBV24-1A0A075B6N3 115 aa12.04□□□□□ -0.48
EPHB4-205ENST00000478459 LOC389332A0A1B0GUA5 103 aa12.04□□□□□ -0.48
EPHB4-205ENST00000478459 S100A8P05109 93 aa12.04□□□□□ -0.48
EPHB4-205ENST00000478459 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
EPHB4-205ENST00000478459 C1orf196B1AJZ1 125 aa12.03□□□□□ -0.48
EPHB4-205ENST00000478459 COX7A2LO14548 114 aa12.03□□□□□ -0.48
EPHB4-205ENST00000478459 SYCNQ0VAF6 134 aa12.03□□□□□ -0.48
EPHB4-205ENST00000478459 PRELID3AQ96N28 172 aa12.03□□□□□ -0.48
EPHB4-205ENST00000478459 TMEM136Q6ZRR5 245 aa12.02□□□□□ -0.49
EPHB4-205ENST00000478459 TMEM18Q96B42 140 aa12.02□□□□□ -0.49
EPHB4-205ENST00000478459 PLAC8Q9NZF1 115 aa12.02□□□□□ -0.49
EPHB4-205ENST00000478459 SMAGPQ0VAQ4 97 aa12.01□□□□□ -0.49
EPHB4-205ENST00000478459 Q6ZRU5 148 aa12.01□□□□□ -0.49
EPHB4-205ENST00000478459 ORMDL3Q8N138 153 aa12.01□□□□□ -0.49
EPHB4-205ENST00000478459 FAM104AQ969W3 186 aa12.01□□□□□ -0.49
EPHB4-205ENST00000478459 CSDC2Q9Y534 153 aaKnown RBP12.01□□□□□ -0.49
EPHB4-205ENST00000478459 A0A0J9YXV3 536 aa11.99□□□□□ -0.49
EPHB4-205ENST00000478459 RPL32P62910 135 aaKnown RBP11.99□□□□□ -0.49
EPHB4-205ENST00000478459 GAGE2BQ13066 116 aa11.99□□□□□ -0.49
EPHB4-205ENST00000478459 C7orf33Q8WU49 177 aa11.99□□□□□ -0.49
EPHB4-205ENST00000478459 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
EPHB4-205ENST00000478459 TIMM21Q9BVV7 248 aa11.99□□□□□ -0.49
EPHB4-205ENST00000478459 IFITM10A6NMD0 228 aa11.98□□□□□ -0.49
EPHB4-205ENST00000478459 OXTP01178 125 aa11.98□□□□□ -0.49
EPHB4-205ENST00000478459 PPBPP02775 128 aa11.98□□□□□ -0.49
EPHB4-205ENST00000478459 MT-ND4LP03901 98 aa11.98□□□□□ -0.49
EPHB4-205ENST00000478459 ATP5L2Q7Z4Y8 100 aa11.98□□□□□ -0.49
EPHB4-205ENST00000478459 RAB5AP20339 215 aa11.97□□□□□ -0.49
EPHB4-205ENST00000478459 SPAG11BQ08648 103 aa11.97□□□□□ -0.49
EPHB4-205ENST00000478459 PNRC1Q12796 327 aaPredicted RBP11.96□□□□□ -0.49
EPHB4-205ENST00000478459 ZC2HC1BQ5TFG8 222 aa11.96□□□□□ -0.49
EPHB4-205ENST00000478459 ANAPC16Q96DE5 110 aa11.96□□□□□ -0.49
EPHB4-205ENST00000478459 SPANXA1Q9NS26 97 aa11.96□□□□□ -0.49
EPHB4-205ENST00000478459 CLLU1Q5K131 121 aa11.95□□□□□ -0.5
EPHB4-205ENST00000478459 ORAOV1Q8WV07 137 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms