RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 NPYP01303 97 aa10.1□□□□□ -0.79
SRRT-209ENST00000474896 PRELID3AQ96N28 172 aa10.1□□□□□ -0.79
SRRT-209ENST00000474896 MRPL18Q9H0U6 180 aaKnown RBP10.1□□□□□ -0.79
SRRT-209ENST00000474896 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
SRRT-209ENST00000474896 TRBV6-8A0A0A6YYG3 113 aa10.09□□□□□ -0.79
SRRT-209ENST00000474896 PHOX2AO14813 284 aa10.09□□□□□ -0.79
SRRT-209ENST00000474896 CRPP02741 224 aa10.09□□□□□ -0.79
SRRT-209ENST00000474896 HNRNPA3P51991 378 aaKnown RBP10.09□□□□□ -0.79
SRRT-209ENST00000474896 POLR2KP53803 58 aaKnown RBP10.09□□□□□ -0.79
SRRT-209ENST00000474896 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
SRRT-209ENST00000474896 KIAA1644Q3SXP7 199 aa10.09□□□□□ -0.79
SRRT-209ENST00000474896 C20orf78Q9BR46 151 aa10.09□□□□□ -0.79
SRRT-209ENST00000474896 HMCN2Q8NDA2 5059 aa10.09□□□□□ -0.79
SRRT-209ENST00000474896 USP17L23D6RBM5 183 aa10.08□□□□□ -0.8
SRRT-209ENST00000474896 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
SRRT-209ENST00000474896 FABP9Q0Z7S8 132 aa10.08□□□□□ -0.8
SRRT-209ENST00000474896 MPV17L2Q567V2 206 aa10.08□□□□□ -0.8
SRRT-209ENST00000474896 TMEM97Q5BJF2 176 aa10.08□□□□□ -0.8
SRRT-209ENST00000474896 NTM-AS1Q6ZSK4 140 aa10.08□□□□□ -0.8
SRRT-209ENST00000474896 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
SRRT-209ENST00000474896 TRAPPC1Q9Y5R8 145 aa10.08□□□□□ -0.8
SRRT-209ENST00000474896 I3L3M4 83 aa10.07□□□□□ -0.8
SRRT-209ENST00000474896 PRSS1P07477 247 aa10.07□□□□□ -0.8
SRRT-209ENST00000474896 PMCHP20382 165 aa10.07□□□□□ -0.8
SRRT-209ENST00000474896 COTL1Q14019 142 aa10.07□□□□□ -0.8
SRRT-209ENST00000474896 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
SRRT-209ENST00000474896 COLCA2A8K830 154 aa10.06□□□□□ -0.8
SRRT-209ENST00000474896 VCYO14598 125 aa10.06□□□□□ -0.8
SRRT-209ENST00000474896 RPL32P62910 135 aaKnown RBP10.06□□□□□ -0.8
SRRT-209ENST00000474896 DGAT2L7PQ6IED9 249 aa10.06□□□□□ -0.8
SRRT-209ENST00000474896 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
SRRT-209ENST00000474896 SMIM2Q9BVW6 85 aa10.06□□□□□ -0.8
SRRT-209ENST00000474896 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
SRRT-209ENST00000474896 TRBV25-1A0A075B6N4 114 aa10.05□□□□□ -0.8
SRRT-209ENST00000474896 IGHV1-24A0A0C4DH33 117 aa10.05□□□□□ -0.8
SRRT-209ENST00000474896 IQCJQ1A5X6 159 aa10.05□□□□□ -0.8
SRRT-209ENST00000474896 C9orf163Q8N9P6 203 aa10.05□□□□□ -0.8
SRRT-209ENST00000474896 ALKBH7Q9BT30 221 aaPredicted RBP10.05□□□□□ -0.8
SRRT-209ENST00000474896 MAP1LC3AQ9H492 121 aa10.05□□□□□ -0.8
SRRT-209ENST00000474896 TSHBP01222 138 aa10.04□□□□□ -0.8
SRRT-209ENST00000474896 AMTP48728 403 aa10.04□□□□□ -0.8
SRRT-209ENST00000474896 MIAQ16674 131 aa10.04□□□□□ -0.8
SRRT-209ENST00000474896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.04□□□□□ -0.8
SRRT-209ENST00000474896 LOC389332A0A1B0GUA5 103 aa10.03□□□□□ -0.8
SRRT-209ENST00000474896 PRSS47A8MTI9 375 aa10.03□□□□□ -0.8
SRRT-209ENST00000474896 RAB5AP20339 215 aa10.03□□□□□ -0.8
SRRT-209ENST00000474896 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
SRRT-209ENST00000474896 PANO1I0J062 215 aa10.02□□□□□ -0.81
SRRT-209ENST00000474896 FCER1GP30273 86 aa10.02□□□□□ -0.81
SRRT-209ENST00000474896 PKIAP61925 76 aa10.02□□□□□ -0.81
SRRT-209ENST00000474896 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
SRRT-209ENST00000474896 TMEM243Q9BU79 118 aa10.02□□□□□ -0.81
SRRT-209ENST00000474896 KRTAP26-1Q6PEX3 210 aa10.01□□□□□ -0.81
SRRT-209ENST00000474896 CLPSL2Q6UWE3 100 aa10.01□□□□□ -0.81
SRRT-209ENST00000474896 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
SRRT-209ENST00000474896 PRR34Q9NV39 138 aa10.01□□□□□ -0.81
SRRT-209ENST00000474896 PKHD1L1Q86WI1 4243 aa10.01□□□□□ -0.81
SRRT-209ENST00000474896 TRGC2P03986 189 aa10□□□□□ -0.81
SRRT-209ENST00000474896 MT1HL1P0DM35 61 aa10□□□□□ -0.81
SRRT-209ENST00000474896 ESDP10768 282 aa10□□□□□ -0.81
SRRT-209ENST00000474896 RBX1P62877 108 aa10□□□□□ -0.81
SRRT-209ENST00000474896 GAGE6Q13070 117 aa10□□□□□ -0.81
SRRT-209ENST00000474896 Q8N8P6 123 aa10□□□□□ -0.81
SRRT-209ENST00000474896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.99□□□□□ -0.81
SRRT-209ENST00000474896 IGKV2-29A2NJV5 120 aaPredicted RBP9.99□□□□□ -0.81
SRRT-209ENST00000474896 TCAPO15273 167 aa9.99□□□□□ -0.81
SRRT-209ENST00000474896 DPH3Q96FX2 82 aa9.99□□□□□ -0.81
SRRT-209ENST00000474896 NXT2Q9NPJ8 142 aaKnown RBP9.99□□□□□ -0.81
SRRT-209ENST00000474896 UBE2L6O14933 153 aa9.98□□□□□ -0.81
SRRT-209ENST00000474896 IFI27P40305 119 aaPredicted RBP9.98□□□□□ -0.81
SRRT-209ENST00000474896 Q6ZRU5 148 aa9.98□□□□□ -0.81
SRRT-209ENST00000474896 PRSS3P2Q8NHM4 247 aa9.97□□□□□ -0.81
SRRT-209ENST00000474896 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
SRRT-209ENST00000474896 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
SRRT-209ENST00000474896 H7C423 109 aa9.96□□□□□ -0.82
SRRT-209ENST00000474896 C20orf203Q8NBC4 194 aa9.96□□□□□ -0.82
SRRT-209ENST00000474896 hDV102S1A0JD36 115 aa9.95□□□□□ -0.82
SRRT-209ENST00000474896 K7EMI3 77 aa9.95□□□□□ -0.82
SRRT-209ENST00000474896 FGF6P10767 208 aa9.95□□□□□ -0.82
SRRT-209ENST00000474896 REG3AQ06141 175 aa9.95□□□□□ -0.82
SRRT-209ENST00000474896 CNBPP62633 177 aaKnown RBP9.94□□□□□ -0.82
SRRT-209ENST00000474896 CIRBPQ14011 172 aaKnown RBP9.94□□□□□ -0.82
SRRT-209ENST00000474896 ORMDL2Q53FV1 153 aa9.94□□□□□ -0.82
SRRT-209ENST00000474896 AMMECR1LQ6DCA0 310 aa9.94□□□□□ -0.82
SRRT-209ENST00000474896 FA2HQ7L5A8 372 aa9.94□□□□□ -0.82
SRRT-209ENST00000474896 TMEM18Q96B42 140 aa9.94□□□□□ -0.82
SRRT-209ENST00000474896 IGLV4-60A0A075B6I1 120 aa9.93□□□□□ -0.82
SRRT-209ENST00000474896 IGHV3-64A0A075B6Q5 118 aa9.93□□□□□ -0.82
SRRT-209ENST00000474896 A0A1B0GUV1 79 aa9.93□□□□□ -0.82
SRRT-209ENST00000474896 LINC01546A6NGU7 62 aa9.93□□□□□ -0.82
SRRT-209ENST00000474896 RNASEKQ6P5S7 137 aaKnown RBP9.93□□□□□ -0.82
SRRT-209ENST00000474896 URB1-AS1Q96HZ7 61 aa9.93□□□□□ -0.82
SRRT-209ENST00000474896 A0A087WYN8 130 aa9.92□□□□□ -0.82
SRRT-209ENST00000474896 TRAV8-4A0A0B4J246 113 aa9.92□□□□□ -0.82
SRRT-209ENST00000474896 SLPIP03973 132 aa9.92□□□□□ -0.82
SRRT-209ENST00000474896 ZNF25P17030 456 aaPredicted RBP9.92□□□□□ -0.82
SRRT-209ENST00000474896 RPL39P62891 51 aaKnown RBP9.92□□□□□ -0.82
SRRT-209ENST00000474896 MRPL52Q86TS9 123 aaKnown RBP9.92□□□□□ -0.82
SRRT-209ENST00000474896 AP5S1Q9NUS5 200 aa9.92□□□□□ -0.82
SRRT-209ENST00000474896 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms