RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 BORCS7-ASMTA0A0B4J1R7 106 aa3.11□□□□□ -1.91
SNRNP40-204ENST00000474025 TRAV26-2A0A0B4J265 109 aa3.11□□□□□ -1.91
SNRNP40-204ENST00000474025 A0A1W2PNN7 141 aa3.11□□□□□ -1.91
SNRNP40-204ENST00000474025 XCL1P47992 114 aa3.11□□□□□ -1.91
SNRNP40-204ENST00000474025 CACNG7P62955 275 aa3.11□□□□□ -1.91
SNRNP40-204ENST00000474025 Q6ZNX1 250 aa3.11□□□□□ -1.91
SNRNP40-204ENST00000474025 FER1L6-AS1Q8NA97 138 aa3.11□□□□□ -1.91
SNRNP40-204ENST00000474025 ALG5Q9Y673 324 aa3.11□□□□□ -1.91
SNRNP40-204ENST00000474025 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 IGHV1-58A0A0C4DH39 117 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 KRTAP23-1A1A580 65 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 PCP4L1A6NKN8 68 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 ATP6V1G1O75348 118 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 MT-ND6P03923 174 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 NPSP0C0P6 89 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 TRGC1P0CF51 173 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 FGF6P10767 208 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 NTF3P20783 257 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 RPL35P42766 123 aaKnown RBP3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 SYCNQ0VAF6 134 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 GAGE2BQ13066 116 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 C1orf137Q5JT78 98 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 AMMECR1LQ6DCA0 310 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 RNASEKQ6P5S7 137 aaKnown RBP3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 SLC7A5P1Q8MH63 180 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 OR5A1Q8NGJ0 315 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
SNRNP40-204ENST00000474025 FXYD6-FXYD2A0A087WZ82 144 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 LOC107984640A0A0U1RRK4 108 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 LINC00959A0A1B0GUT2 108 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 F2Z2F3 143 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 H0Y9J4 135 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 H7C423 109 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 CCL25O15444 150 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 PFDN1O60925 122 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 NCR2O95944 276 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 APCSP02743 223 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 GIPP09681 153 aaPredicted RBP3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 KRTAP1-4P0C5Y4 121 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 BCL2P10415 239 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 ZNF25P17030 456 aaPredicted RBP3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 DEFA1P59665 94 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 RPS20P60866 119 aaKnown RBP3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 PRR4Q16378 134 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 C9orf116Q5BN46 136 aaPredicted RBP3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 LYZL1Q6UWQ5 148 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 TMUB2Q71RG4 321 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 PHF5AQ7RTV0 110 aaKnown RBP3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 GATD1Q8NB37 220 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 OR2D3Q8NGH3 330 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 SFT2D1Q8WV19 159 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 DIRC1Q969H9 104 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 KRTAP9-8Q9BYQ0 159 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 CYTL1Q9NRR1 136 aa3.09□□□□□ -1.91
SNRNP40-204ENST00000474025 IGLV4-69A0A075B6H9 119 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 IGLV1-50A0A075B6I6 118 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 A0A1B0GV50 99 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 C19orf71A6NCJ1 209 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 G3V3Q6 166 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 APOMO95445 188 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 IGLV7-43P04211 117 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 CTRLP40313 264 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 MEF2BQ02080 365 aaPredicted RBP3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 CENPWQ5EE01 88 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 CD164L2Q6UWJ8 174 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 NUP35Q8NFH5 326 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 MBD3L1Q8WWY6 194 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 C11orf52Q96A22 123 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 ISOC2Q96AB3 205 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 RPL39LQ96EH5 51 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 CNFNQ9BYD5 112 aa3.08□□□□□ -1.92
SNRNP40-204ENST00000474025 SDHAF1A6NFY7 115 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 IFNA1P01562 189 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 ESDP10768 282 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 RPL18AQ02543 176 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 TWIST1Q15672 202 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 KRTAP11-1Q8IUC1 163 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 C9orf62Q8N4C0 152 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 KCNRGQ8N5I3 272 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 FAM213BQ8TBF2 198 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 BTF3L4Q96K17 158 aa3.07□□□□□ -1.92
SNRNP40-204ENST00000474025 FSIP2Q5CZC0 6907 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 TRBV20OR9-2A0A075B6H5 130 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 A0A087WZ39 114 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 A0A0A0MQY5 61 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 UMAD1C9J7I0 102 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 COX7A2LO14548 114 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 BCL2L11O43521 198 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 TSHBP01222 138 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 RPL13AP40429 203 aaKnown RBP3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 EIF5AP63241 154 aaKnown RBP3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 SS18Q15532 418 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 EIF5AL1Q6IS14 154 aaKnown RBP3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 MRPL52Q86TS9 123 aaKnown RBP3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 SMIM12Q96EX1 92 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 MRAP2Q96G30 205 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 TMEM101Q96IK0 257 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms